Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_G02
(819 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 1.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 1.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 1.7
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 30 2.3
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.0
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.0
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.0
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 5.3
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 234 PPPXXXFFFXGGPXXPPXXGGGXXPPXXP 148
PPP GGP PP GG PP P
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 559 GGRGXXPXPAXAAXPPPHXTRPXXXRRXPPXPP 657
GG P P PPP P + PP PP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 234 PPPXXXFFFXGGPXXPPXXGGGXXPPXXP 148
PPP GGP PP GG PP P
Sbjct: 746 PPPGGLPPISGGPPPPPPPPGGCPPPPPP 774
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 559 GGRGXXPXPAXAAXPPPHXTRPXXXRRXPPXPP 657
GG P P PPP P + PP PP
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -1
Query: 234 PPPXXXFFFXGGPXXPPXXGGGXXPPXXP 148
PPP GGP PP GG PP P
Sbjct: 329 PPPGGLPPISGGPPPPPPPPGGCPPPPPP 357
Score = 28.7 bits (61), Expect = 5.3
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 559 GGRGXXPXPAXAAXPPPHXTRPXXXRRXPPXPP 657
GG P P PPP P + PP PP
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 29.9 bits (64), Expect = 2.3
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -1
Query: 618 GXVGGGXRXXXGGGXXTPXPXGGGGXRG 535
G GGG R GGG GGGG RG
Sbjct: 8 GRGGGGFRGGRGGGSGFTPRGGGGGFRG 35
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.5 bits (63), Expect = 3.0
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 250 FXGGXPPPXXXFFFFXGXXXPPXXXGGPXPPGXP 149
F GG PPP G PP G P PP P
Sbjct: 90 FAGGIPPPPP---MMGGIPPPPPMFGAPPPPPPP 120
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/61 (27%), Positives = 18/61 (29%)
Frame = +3
Query: 171 PPXXXGGXXXPXKKKXXXXGGGXPPXKKXXKXXPXXGXXGXPXPFFFLXPPXPXXKTNPP 350
PP P K G G PP P P P PP P + PP
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 291
Query: 351 P 353
P
Sbjct: 292 P 292
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/61 (27%), Positives = 18/61 (29%)
Frame = +3
Query: 171 PPXXXGGXXXPXKKKXXXXGGGXPPXKKXXKXXPXXGXXGXPXPFFFLXPPXPXXKTNPP 350
PP P K G G PP P P P PP P + PP
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 312
Query: 351 P 353
P
Sbjct: 313 P 313
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 4.0
Identities = 17/61 (27%), Positives = 18/61 (29%)
Frame = +3
Query: 171 PPXXXGGXXXPXKKKXXXXGGGXPPXKKXXKXXPXXGXXGXPXPFFFLXPPXPXXKTNPP 350
PP P K G G PP P P P PP P + PP
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPP 297
Query: 351 P 353
P
Sbjct: 298 P 298
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.7 bits (61), Expect = 5.3
Identities = 20/66 (30%), Positives = 21/66 (31%)
Frame = +3
Query: 156 PGGXGPPXXXGGXXXPXKKKXXXXGGGXPPXKKXXKXXPXXGXXGXPXPFFFLXPPXPXX 335
P GPP GG P GG PP P G P P + PP P
Sbjct: 1549 PQNRGPPM--GGLPPPHGGMNGWRGGPPPPRGGSHCQGPPP-LMGGPPPRLGMPPPGPPP 1605
Query: 336 KTNPPP 353
PP
Sbjct: 1606 PNGGPP 1611
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,619,989
Number of Sequences: 27780
Number of extensions: 156368
Number of successful extensions: 1314
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1127
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2019417216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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