Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_F24
         (923 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   4.4  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    23   4.4  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   5.9  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    22   7.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +1

Query: 277  PKTTTLMETATNLSTTVHITWTV 345
            P TT   +T T  STT   T TV
Sbjct: 1177 PSTTNHWQTKTTTSTTTRPTTTV 1199


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +1

Query: 880 LPAPXXPPXPPPP 918
           LP P  PP P PP
Sbjct: 175 LPLPQVPPLPLPP 187


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.2 bits (45), Expect = 5.9
 Identities = 12/42 (28%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = +3

Query: 138 PTLK-TPVRVVENADSVVINDPDPFFAQPTVGNGYEPIDNRP 260
           P+L+ TP+ ++    + + N   P  A   VG G+ P    P
Sbjct: 30  PSLRGTPLAMLAAQCNKLSNKSPPPLADAAVGKGFHPWKKSP 71


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.8 bits (44), Expect = 7.8
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 722 PPIXPPHXPXLXXPPN 769
           P + PPH P    PP+
Sbjct: 17  PLLTPPHNPAYSPPPS 32


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,930
Number of Sequences: 336
Number of extensions: 3319
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25858250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)