Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_F24
(923 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 35 0.094
AF099927-3|AAZ32795.1| 893|Caenorhabditis elegans Hypothetical ... 34 0.17
AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical ... 34 0.17
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 33 0.22
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 33 0.22
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.29
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.29
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 33 0.29
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.29
AF002198-10|AAF99937.1| 471|Caenorhabditis elegans Hypothetical... 33 0.38
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 1.2
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.2
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 1.2
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 31 1.5
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 31 1.5
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 31 1.5
Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical p... 30 2.0
Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical p... 30 2.0
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 30 2.0
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 25 2.5
Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical p... 30 2.7
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 3.6
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 29 3.6
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 24 4.0
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 26 4.3
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 29 4.7
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 4.7
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 29 4.7
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.7
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 29 6.2
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 6.2
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 6.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 6.2
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 6.2
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 6.2
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 6.2
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 6.2
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z82095-2|CAB05027.2| 602|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical pr... 28 8.2
Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical pr... 28 8.2
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 28 8.2
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 8.2
U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical pr... 28 8.2
M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen ... 28 8.2
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 28 8.2
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 34.7 bits (76), Expect = 0.094
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = +3
Query: 594 SGXPXXXXPXXPPGPPPPLXXXXXTXXLXXXXKSXXXXXPPSPPPXNPXTXPXXPNPP 767
S P P P PPP + PPSP P NP P P PP
Sbjct: 136 SSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPP 193
Score = 31.5 bits (68), Expect = 0.88
Identities = 18/55 (32%), Positives = 21/55 (38%)
Frame = +3
Query: 627 PPGPPPPLXXXXXTXXLXXXXKSXXXXXPPSPPPXNPXTXPXXPNPPIXXXXSPP 791
PP PPPP ++ PP PPP P T P PP +PP
Sbjct: 122 PPPPPPP-----------RKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPP 165
>AF099927-3|AAZ32795.1| 893|Caenorhabditis elegans Hypothetical
protein T04C4.1b protein.
Length = 893
Score = 33.9 bits (74), Expect = 0.17
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -2
Query: 220 GWAKNGSGSLITTESAFSTTLTGVLSVGHSQQSEDENHEEFHFYMITSYH 71
GW S S++TT AFS ++ G Q D +H HF +S H
Sbjct: 236 GWRTRTSRSIMTTPEAFSRVRHISITFGEQQHDIDTDHSNQHFGSPSSLH 285
>AF099927-1|AAZ32794.1| 955|Caenorhabditis elegans Hypothetical
protein T04C4.1a protein.
Length = 955
Score = 33.9 bits (74), Expect = 0.17
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -2
Query: 220 GWAKNGSGSLITTESAFSTTLTGVLSVGHSQQSEDENHEEFHFYMITSYH 71
GW S S++TT AFS ++ G Q D +H HF +S H
Sbjct: 297 GWRTRTSRSIMTTPEAFSRVRHISITFGEQQHDIDTDHSNQHFGSPSSLH 346
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 33.5 bits (73), Expect = 0.22
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +3
Query: 627 PPGPPPPLXXXXXTXXLXXXXKSXXXXXPPSPPPXNPXTXPXXPNPP 767
PP PPPP T PP PPP P + P PP
Sbjct: 766 PPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPP 812
Score = 31.5 bits (68), Expect = 0.88
Identities = 16/51 (31%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = +3
Query: 618 PXXPPGPPPPLXXXXXTXXLXXXXKSXXXXXPPSP-PPXNPXTXPXXPNPP 767
P PP PPPP + PP P PP + P P PP
Sbjct: 765 PPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPP 815
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 33.5 bits (73), Expect = 0.22
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +3
Query: 627 PPGPPPPLXXXXXTXXLXXXXKSXXXXXPPSPPPXNPXTXPXXPNPP 767
PP PPPP T PP PPP P + P PP
Sbjct: 766 PPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPP 812
Score = 31.5 bits (68), Expect = 0.88
Identities = 16/51 (31%), Positives = 18/51 (35%), Gaps = 1/51 (1%)
Frame = +3
Query: 618 PXXPPGPPPPLXXXXXTXXLXXXXKSXXXXXPPSP-PPXNPXTXPXXPNPP 767
P PP PPPP + PP P PP + P P PP
Sbjct: 765 PPPPPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPPPP 815
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 33.5 bits (73), Expect = 0.22
Identities = 19/57 (33%), Positives = 20/57 (35%)
Frame = -2
Query: 766 GGXGKXGXVXGXNGGGXGGXXXXXDFXXXXXXXVXXXXXSGGGGPGGXXGXXXXGXP 596
GG G G NGGG GG D +GGG GG G G P
Sbjct: 106 GGFDDNGGGRGGNGGGRGGTGGFGDNGGGRGGNGGGRGGNGGGNNGGGRGGNGGGRP 162
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.29
Identities = 17/58 (29%), Positives = 18/58 (31%)
Frame = +3
Query: 618 PXXPPGPPPPLXXXXXTXXLXXXXKSXXXXXPPSPPPXNPXTXPXXPNPPIXXXXSPP 791
P PPG PP+ PP PPP P P PP PP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.29
Identities = 17/58 (29%), Positives = 18/58 (31%)
Frame = +3
Query: 618 PXXPPGPPPPLXXXXXTXXLXXXXKSXXXXXPPSPPPXNPXTXPXXPNPPIXXXXSPP 791
P PPG PP+ PP PPP P P PP PP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 33.1 bits (72), Expect = 0.29
Identities = 20/54 (37%), Positives = 21/54 (38%)
Frame = +3
Query: 627 PPGPPPPLXXXXXTXXLXXXXKSXXXXXPPSPPPXNPXTXPXXPNPPIXXXXSP 788
PP PPPPL S PP PPP P T P PPI +P
Sbjct: 69 PPPPPPPLI-------------SILQQAPPPPPPPPPPTLKAPPPPPILGLKTP 109
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.29
Identities = 17/58 (29%), Positives = 18/58 (31%)
Frame = +3
Query: 618 PXXPPGPPPPLXXXXXTXXLXXXXKSXXXXXPPSPPPXNPXTXPXXPNPPIXXXXSPP 791
P PPG PP+ PP PPP P P PP PP
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
>AF002198-10|AAF99937.1| 471|Caenorhabditis elegans Hypothetical
protein F35F10.12 protein.
Length = 471
Score = 32.7 bits (71), Expect = 0.38
Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +3
Query: 195 DPDPFFAQPT-VGNGYEPIDNRPYIVNPPKDYN--PNGNGYEPIDNGAYYVDRPQGRPYF 365
DP+ +QPT +G G P P V PP Y P +G DNGA P G PY
Sbjct: 345 DPNLPPSQPTPIGGGVAPAGVAPAGVVPPPGYGFLPMTDG---TDNGAGDTPYPVGPPYP 401
Query: 366 KPTPFPGARGGKXR 407
P P G + +
Sbjct: 402 SDVPAPYPSGDEPK 415
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/66 (31%), Positives = 21/66 (31%), Gaps = 3/66 (4%)
Frame = +3
Query: 603 PXXXXPXXPPGPPPPLXXXXXTXXLXXXXKSXXXXXPPSPPP---XNPXTXPXXPNPPIX 773
P P PP PP P T S PP PPP P P P PP
Sbjct: 267 PPSVTPMPPPMPPTP----GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 322
Query: 774 XXXSPP 791
PP
Sbjct: 323 SRFGPP 328
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/62 (29%), Positives = 20/62 (32%), Gaps = 4/62 (6%)
Frame = +3
Query: 618 PXXPPGPPPPLXXXXXTXXLXXXXKSXXXXX---PPSPPPXNPXTXP-XXPNPPIXXXXS 785
P PP PPP + PP PPP P P P PP +
Sbjct: 314 PGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPA 373
Query: 786 PP 791
PP
Sbjct: 374 PP 375
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/57 (29%), Positives = 17/57 (29%)
Frame = +3
Query: 597 GXPXXXXPXXPPGPPPPLXXXXXTXXLXXXXKSXXXXXPPSPPPXNPXTXPXXPNPP 767
G P P P PPPL PP PPP P P P P
Sbjct: 26 GPPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMP 82
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/66 (31%), Positives = 21/66 (31%), Gaps = 3/66 (4%)
Frame = +3
Query: 603 PXXXXPXXPPGPPPPLXXXXXTXXLXXXXKSXXXXXPPSPPP---XNPXTXPXXPNPPIX 773
P P PP PP P T S PP PPP P P P PP
Sbjct: 277 PPSVTPMPPPMPPTP----GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 332
Query: 774 XXXSPP 791
PP
Sbjct: 333 SRFGPP 338
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/62 (29%), Positives = 20/62 (32%), Gaps = 4/62 (6%)
Frame = +3
Query: 618 PXXPPGPPPPLXXXXXTXXLXXXXKSXXXXX---PPSPPPXNPXTXP-XXPNPPIXXXXS 785
P PP PPP + PP PPP P P P PP +
Sbjct: 324 PGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPA 383
Query: 786 PP 791
PP
Sbjct: 384 PP 385
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/72 (29%), Positives = 23/72 (31%), Gaps = 5/72 (6%)
Frame = +3
Query: 603 PXXXXPXXPPGPPPPLXXXXXTXXLXXXXKSXXXXXP----PS-PPPXNPXTXPXXPNPP 767
P P P G PPP S P PS PPP + P P PP
Sbjct: 95 PPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPPTSSAAAPIVPPPP 154
Query: 768 IXXXXSPPHXXT 803
+ PP T
Sbjct: 155 VQSTAQPPPSGT 166
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/72 (29%), Positives = 23/72 (31%), Gaps = 5/72 (6%)
Frame = +3
Query: 603 PXXXXPXXPPGPPPPLXXXXXTXXLXXXXKSXXXXXP----PS-PPPXNPXTXPXXPNPP 767
P P P G PPP S P PS PPP + P P PP
Sbjct: 118 PPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPPTSSAAAPIVPPPP 177
Query: 768 IXXXXSPPHXXT 803
+ PP T
Sbjct: 178 VQSTAQPPPSGT 189
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 30.7 bits (66), Expect = 1.5
Identities = 21/72 (29%), Positives = 23/72 (31%), Gaps = 5/72 (6%)
Frame = +3
Query: 603 PXXXXPXXPPGPPPPLXXXXXTXXLXXXXKSXXXXXP----PS-PPPXNPXTXPXXPNPP 767
P P P G PPP S P PS PPP + P P PP
Sbjct: 368 PPIGMPPPPLGMPPPHIGLGAAPYAVPPPMSLLGPPPFSVPPSVPPPTSSAAAPIVPPPP 427
Query: 768 IXXXXSPPHXXT 803
+ PP T
Sbjct: 428 VQSTAQPPPSGT 439
>Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical
protein F32D8.7b protein.
Length = 380
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 859 PXPXXXXLPAPXXPPXPPPP 918
P P LP P PP PPPP
Sbjct: 234 PRPTTRRLPPPTTPPPPPPP 253
>Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical
protein F32D8.7a protein.
Length = 378
Score = 30.3 bits (65), Expect = 2.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 859 PXPXXXXLPAPXXPPXPPPP 918
P P LP P PP PPPP
Sbjct: 232 PRPTTRRLPPPTTPPPPPPP 251
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 30.3 bits (65), Expect = 2.0
Identities = 19/63 (30%), Positives = 19/63 (30%)
Frame = -2
Query: 790 GGXKXXQIGGXGKXGXVXGXNGGGXGGXXXXXDFXXXXXXXVXXXXXSGGGGPGGXXGXX 611
GG GG G G G GGG G F GG G GG G
Sbjct: 155 GGGGGGDFGGYGGGGMGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGG 214
Query: 610 XXG 602
G
Sbjct: 215 YGG 217
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 25.0 bits (52), Expect(2) = 2.5
Identities = 11/32 (34%), Positives = 12/32 (37%)
Frame = +3
Query: 711 PPSPPPXNPXTXPXXPNPPIXXXXSPPHXXTG 806
PP PPP P P P+ SP G
Sbjct: 358 PPPPPPPPPPPPPQTPSASSSVTFSPTKSVDG 389
Score = 23.4 bits (48), Expect(2) = 2.5
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 603 PXXXXPXXPPGPPPP 647
P P PP PPPP
Sbjct: 349 PPIISPPAPPPPPPP 363
>Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +3
Query: 174 ADSVVINDPDPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 314
+ SV+ P QP VGN Y+P P +PP Y GY P
Sbjct: 80 SQSVLFEQPQ---IQPLVGNSYDP----PVRFDPPYAYRATATGYMP 119
>Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical
protein M04G12.4b protein.
Length = 550
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +3
Query: 174 ADSVVINDPDPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 314
+ SV+ P QP VGN Y+P P +PP Y GY P
Sbjct: 51 SQSVLFEQPQ---IQPLVGNSYDP----PVRFDPPYAYRATATGYMP 90
>Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +3
Query: 174 ADSVVINDPDPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 314
+ SV+ P QP VGN Y+P P +PP Y GY P
Sbjct: 80 SQSVLFEQPQ---IQPLVGNSYDP----PVRFDPPYAYRATATGYMP 119
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/59 (32%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Frame = +3
Query: 618 PXXP-PGPPPPLXXXXXTXXLXXXXKSXXXXXPPSPPPXNPXTXPXXPNPPIXXXXSPP 791
P P P PPPP + S PP PPP P P PP PP
Sbjct: 467 PTTPKPAPPPPSRIPNPSPSPQPAEVSKS---PPPPPPLPPIATPSSVPPPPPPPPPPP 522
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 29.5 bits (63), Expect = 3.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 923 CXGGGGXGGXXGAGSXLXXGXGXXXG 846
C GGGG GG G G G G G
Sbjct: 31 CGGGGGCGGGGGCGGGCGYGGGGGCG 56
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 24.2 bits (50), Expect(2) = 4.0
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 603 PXXXXPXXPPGPPPP 647
P P PP PPPP
Sbjct: 708 PPPGIPGYPPAPPPP 722
Score = 23.4 bits (48), Expect(2) = 4.0
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +3
Query: 711 PPSPPPXNPXTXPXXPNPPIXXXXSPP 791
PP+PPP P PP+ + P
Sbjct: 716 PPAPPPPGVGPPPPQGIPPMGFDPNKP 742
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 26.2 bits (55), Expect(2) = 4.3
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -1
Query: 917 GGGGXGGXXGAGSXLXXGXGXXXG 846
GGGG GG G G G G G
Sbjct: 142 GGGGGGGCGGGGGGCGGGGGGCGG 165
Score = 21.4 bits (43), Expect(2) = 4.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = -1
Query: 923 CXGGGGXGG 897
C GGGG GG
Sbjct: 99 CGGGGGCGG 107
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 29.1 bits (62), Expect = 4.7
Identities = 27/92 (29%), Positives = 42/92 (45%), Gaps = 9/92 (9%)
Frame = +3
Query: 129 WLWPTLKTPVRV------VENADSVVIN--DPDPFFAQPTVGN-GYEPIDNRPYIVNPPK 281
++WPTL+ + V V+ A V N D + + +P V + GY+ D VN P
Sbjct: 594 YVWPTLRRAMSVEPSSMPVDFAPGVPHNYDDNEEYKWEPVVNDPGYKKEDKNFTPVNSPP 653
Query: 282 DYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTP 377
G+G P+D A R Q + +P+P
Sbjct: 654 ASPRRGHGVGPLDEPA----RRQAKYVIQPSP 681
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.1 bits (62), Expect = 4.7
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 847 PXXXPXPXXXXLPAPXXPPXPPPP 918
P P P P P PP PPPP
Sbjct: 55 PPPPPCPAQFCPPPPICPPPPPPP 78
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/59 (27%), Positives = 18/59 (30%)
Frame = +3
Query: 618 PXXPPGPPPPLXXXXXTXXLXXXXKSXXXXXPPSPPPXNPXTXPXXPNPPIXXXXSPPH 794
P PP P PP T + PP P T P P+ PPH
Sbjct: 22 PPPPPPPAPPALPRELTQISTETAAAVAALVRKPPPSLPPSTMPPGPHGMPFMGGPPPH 80
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/69 (28%), Positives = 22/69 (31%)
Frame = +3
Query: 711 PPSPPPXNPXTXPXXPNPPIXXXXSPPHXXTGXXXXXXXXFSXXFXLXXTPXXXKXAPRA 890
PP PP +P PP SPP TG +P PRA
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP----PPPRA 294
Query: 891 XXSPXSPPP 917
P PPP
Sbjct: 295 GSPPPPPPP 303
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = +3
Query: 618 PXXPPGPPPPLXXXXXTXXLXXXXKSXXXXXPPSPPPXNPXTXPXXPNPPIXXXXSPPHX 797
P PPPP PP PPP + P PP SPP
Sbjct: 266 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR-GSPPTGSLPPPQAGGSPPPA 324
Query: 798 XTG 806
TG
Sbjct: 325 GTG 327
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/69 (28%), Positives = 22/69 (31%)
Frame = +3
Query: 711 PPSPPPXNPXTXPXXPNPPIXXXXSPPHXXTGXXXXXXXXFSXXFXLXXTPXXXKXAPRA 890
PP PP +P PP SPP TG +P PRA
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP----PPPRA 315
Query: 891 XXSPXSPPP 917
P PPP
Sbjct: 316 GSPPPPPPP 324
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = +3
Query: 618 PXXPPGPPPPLXXXXXTXXLXXXXKSXXXXXPPSPPPXNPXTXPXXPNPPIXXXXSPPHX 797
P PPPP PP PPP + P PP SPP
Sbjct: 287 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR-GSPPTGSLPPPQAGGSPPPA 345
Query: 798 XTG 806
TG
Sbjct: 346 GTG 348
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/69 (28%), Positives = 22/69 (31%)
Frame = +3
Query: 711 PPSPPPXNPXTXPXXPNPPIXXXXSPPHXXTGXXXXXXXXFSXXFXLXXTPXXXKXAPRA 890
PP PP +P PP SPP TG +P PRA
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSP----PPPRA 300
Query: 891 XXSPXSPPP 917
P PPP
Sbjct: 301 GSPPPPPPP 309
Score = 28.7 bits (61), Expect = 6.2
Identities = 18/63 (28%), Positives = 19/63 (30%)
Frame = +3
Query: 618 PXXPPGPPPPLXXXXXTXXLXXXXKSXXXXXPPSPPPXNPXTXPXXPNPPIXXXXSPPHX 797
P PPPP PP PPP + P PP SPP
Sbjct: 272 PPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPR-GSPPTGSLPPPQAGGSPPPA 330
Query: 798 XTG 806
TG
Sbjct: 331 GTG 333
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 28.7 bits (61), Expect = 6.2
Identities = 25/97 (25%), Positives = 29/97 (29%), Gaps = 1/97 (1%)
Frame = -1
Query: 914 GGGXGGXXGAGSXLXXGXGXXXGEXX*K-XXRGXXXXXRGTVRGRXXXXNWGVXXGXVXX 738
GGG GG G G G G + +G G G G
Sbjct: 187 GGGQGGNQGGGGGRGGNQGGEQGGWGGQGGSQGGSQGGSQGGWGNQGGQQGGGRGGQQGP 246
Query: 737 GVXWGGGXXXXXXXXFXXGXKXXCXRXXXKWGGWSXG 627
G WGGG + G + R WGGW G
Sbjct: 247 G-GWGGGGRGGGWGGWGRGSRWGWGR--PSWGGWGRG 280
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -1
Query: 917 GGGGXGGXXGAGSXLXXGXGXXXGEXX*KXXRGXXXXXRG 798
GGGG GG G G G G G RG RG
Sbjct: 97 GGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGGRGRG 136
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/57 (28%), Positives = 19/57 (33%)
Frame = +3
Query: 597 GXPXXXXPXXPPGPPPPLXXXXXTXXLXXXXKSXXXXXPPSPPPXNPXTXPXXPNPP 767
G P PP PPPP + + + PP PP P P PP
Sbjct: 599 GTPENRPHAVPPPPPPP---PPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPP 652
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/57 (28%), Positives = 19/57 (33%)
Frame = +3
Query: 597 GXPXXXXPXXPPGPPPPLXXXXXTXXLXXXXKSXXXXXPPSPPPXNPXTXPXXPNPP 767
G P PP PPPP + + + PP PP P P PP
Sbjct: 425 GTPENRPHAVPPPPPPP---PPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPP 478
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/50 (30%), Positives = 17/50 (34%)
Frame = +3
Query: 618 PXXPPGPPPPLXXXXXTXXLXXXXKSXXXXXPPSPPPXNPXTXPXXPNPP 767
P PP PPPP+ + PP PP P P PP
Sbjct: 212 PQAPPAPPPPIGGIAPV-------NAHGAPPPPPLPPVGAGAPPPPPPPP 254
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/58 (27%), Positives = 16/58 (27%)
Frame = +3
Query: 594 SGXPXXXXPXXPPGPPPPLXXXXXTXXLXXXXKSXXXXXPPSPPPXNPXTXPXXPNPP 767
SG P PPGPP P PP P P P P P
Sbjct: 171 SGQACITCPAGPPGPPGPDGNAGPAGAPGVPGPDGDAGSPPPPGPPGPPGPPGNDGQP 228
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/50 (30%), Positives = 17/50 (34%)
Frame = +3
Query: 618 PXXPPGPPPPLXXXXXTXXLXXXXKSXXXXXPPSPPPXNPXTXPXXPNPP 767
P PP PPPP+ + PP PP P P PP
Sbjct: 198 PQAPPAPPPPIGGIAPV-------NAHGAPPPPPLPPVGAGAPPPPPPPP 240
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 28.7 bits (61), Expect = 6.2
Identities = 15/50 (30%), Positives = 17/50 (34%)
Frame = +3
Query: 618 PXXPPGPPPPLXXXXXTXXLXXXXKSXXXXXPPSPPPXNPXTXPXXPNPP 767
P PP PPPP+ + PP PP P P PP
Sbjct: 198 PQAPPAPPPPIGGIAPV-------NAHGAPPPPPLPPVGAGAPPPPPPPP 240
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.3 bits (60), Expect = 8.2
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +1
Query: 787 PLTVPRXXXXXPRXXFXXXSPXXXPXPXXXXLPAPXXPPXPPPP 918
P P P P P P PAP P PPPP
Sbjct: 82 PYVPPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPP 125
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.3 bits (60), Expect = 8.2
Identities = 17/52 (32%), Positives = 19/52 (36%), Gaps = 2/52 (3%)
Frame = +3
Query: 618 PXXP-PGPPPPLXXXXXTXXLXXXXKSXXXXXPPSPPPX-NPXTXPXXPNPP 767
P P P PPPP + S PP PP P + P P PP
Sbjct: 460 PTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPP 511
>Z82095-2|CAB05027.2| 602|Caenorhabditis elegans Hypothetical
protein ZK849.4 protein.
Length = 602
Score = 28.3 bits (60), Expect = 8.2
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 847 PXXXPXPXXXXLPAPXXPPXPPPP 918
P P LP P PP PPPP
Sbjct: 483 PPPSPPALPPALPNPNEPPPPPPP 506
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 865 PXXXXLPAPXXPPXPPPP 918
P LP P PP PPPP
Sbjct: 778 PPFFALPVPPPPPVPPPP 795
>Z69903-7|CAA93776.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/58 (25%), Positives = 18/58 (31%)
Frame = +3
Query: 618 PXXPPGPPPPLXXXXXTXXLXXXXKSXXXXXPPSPPPXNPXTXPXXPNPPIXXXXSPP 791
P PP P PP P PPP P +PP+ +PP
Sbjct: 110 PAFPPPPRPPKPEQYKFPPAPSVPLLHDRYFVPPPPPVPPRHSRVQQSPPVPIHPTPP 167
>Z69660-1|CAA93489.1| 1607|Caenorhabditis elegans Hypothetical
protein F39B1.1 protein.
Length = 1607
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/58 (25%), Positives = 18/58 (31%)
Frame = +3
Query: 618 PXXPPGPPPPLXXXXXTXXLXXXXKSXXXXXPPSPPPXNPXTXPXXPNPPIXXXXSPP 791
P PP P PP P PPP P +PP+ +PP
Sbjct: 110 PAFPPPPRPPKPEQYKFPPAPSVPLLHDRYFVPPPPPVPPRHSRVQQSPPVPIHPTPP 167
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein
34 protein.
Length = 299
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/55 (27%), Positives = 16/55 (29%)
Frame = +3
Query: 603 PXXXXPXXPPGPPPPLXXXXXTXXLXXXXKSXXXXXPPSPPPXNPXTXPXXPNPP 767
P P PPGPP P + P P P P P P P
Sbjct: 144 PCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPPGPPGAPGAP 198
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 28.3 bits (60), Expect = 8.2
Identities = 19/67 (28%), Positives = 20/67 (29%)
Frame = +1
Query: 718 PPPHXTPXXTXPXXTPQFXFXXLPLTVPRXXXXXPRXXFXXXSPXXXPXPXXXXLPAPXX 897
PPP P P P P P+ P P P P P P
Sbjct: 97 PPPAPYPQHAVPAPAPP------PAPYPQHAVPAPAPY--QQQPPPPPPPPHYPPPPPHY 148
Query: 898 PPXPPPP 918
PP PP P
Sbjct: 149 PPPPPAP 155
>U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical
protein C30G12.1 protein.
Length = 469
Score = 28.3 bits (60), Expect = 8.2
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 283 TTTLMETATNLSTTVHITWTVPKADLTSSLPLS 381
TTT M T T ST + T T P+ ++P S
Sbjct: 294 TTTTMTTTTRTSTAIPTTTTTPRQISLQTIPFS 326
>M80650-1|AAA27985.1| 298|Caenorhabditis elegans alpha-collagen
protein.
Length = 298
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/55 (27%), Positives = 16/55 (29%)
Frame = +3
Query: 603 PXXXXPXXPPGPPPPLXXXXXTXXLXXXXKSXXXXXPPSPPPXNPXTXPXXPNPP 767
P P PPGPP P + P P P P P P P
Sbjct: 144 PWKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPKGPPGAPGAP 198
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular
collagen RAM-4 protein.
Length = 299
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/55 (27%), Positives = 16/55 (29%)
Frame = +3
Query: 603 PXXXXPXXPPGPPPPLXXXXXTXXLXXXXKSXXXXXPPSPPPXNPXTXPXXPNPP 767
P P PPGPP P + P P P P P P P
Sbjct: 144 PCKPCPQGPPGPPGPPGPPGDSGEPGSPGLPGQDAAPGEPGPKGPPGPPGAPGAP 198
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,061,909
Number of Sequences: 27780
Number of extensions: 342605
Number of successful extensions: 3028
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 1262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2488
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2370744068
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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