Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_F23
         (879 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    25   1.0  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   3.2  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   3.2  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   3.2  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   7.3  

>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = +3

Query: 42  LIFFILLVICDKQHVPDQCI 101
           L  FIL  ICD+ H    C+
Sbjct: 327 LAIFILYFICDEAHYASNCL 346


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 641 SIXLQFITKDHTIIYV 594
           ++ LQFIT  HT I+V
Sbjct: 213 ALVLQFITLQHTFIWV 228


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 641 SIXLQFITKDHTIIYV 594
           ++ LQFIT  HT I+V
Sbjct: 213 ALVLQFITLQHTFIWV 228


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -2

Query: 641 SIXLQFITKDHTIIYV 594
           ++ LQFIT  HT I+V
Sbjct: 213 ALVLQFITLQHTFIWV 228


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 220 GPSRICSKFRQLPRGIN 270
           G S IC +FR L +GI+
Sbjct: 276 GSSFICPEFRYLMKGID 292


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,460
Number of Sequences: 336
Number of extensions: 3000
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)