Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_F23
(879 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.36
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.36
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 33 0.36
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.82
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.82
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.82
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.4
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.4
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 3.3
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/64 (29%), Positives = 19/64 (29%), Gaps = 4/64 (6%)
Frame = +2
Query: 698 PPXXXXXKXLPXAPXSPXXGXXXPPPPTXNXXXGXXXXXPXXXXPXXP----PPXXXXXX 865
PP P P P G PPPP P P P PP
Sbjct: 275 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMP 334
Query: 866 PPPP 877
PPPP
Sbjct: 335 PPPP 338
Score = 31.5 bits (68), Expect = 0.82
Identities = 18/62 (29%), Positives = 19/62 (30%)
Frame = +3
Query: 690 PXXPPXXXXXKXXPXPXXPPXXGXXXPPPQXKTXXXGXXXXPPXXXXXXXPPPXGTXXXP 869
P PP P P P PPP + G PP P P G P
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSS---GMWPPPPPPPPGRTPGPPGMPGMP 317
Query: 870 PP 875
PP
Sbjct: 318 PP 319
Score = 31.5 bits (68), Expect = 0.82
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = +1
Query: 700 PPXXXXXKXXPGPXXPXXXGXXXPPPNXKPXXGXXXXXPXXXXXXXXPPXXXXXGPPPP 876
PP P P G PPP P G P PP PPPP
Sbjct: 327 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 385
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/66 (28%), Positives = 19/66 (28%), Gaps = 4/66 (6%)
Frame = +3
Query: 690 PXXPPXXXXXKXXPXPXXPPXXGXXXPPPQXKTXXX----GXXXXPPXXXXXXXPPPXGT 857
P PP P P PP G PPP G PP PP
Sbjct: 272 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMG 331
Query: 858 XXXPPP 875
PPP
Sbjct: 332 GMPPPP 337
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +2
Query: 767 PPPPTXNXXXGXXXXXPXXXXPXXPPPXXXXXXPPPP 877
PPPP+ P PPP PPPP
Sbjct: 265 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPP 301
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +2
Query: 755 GXXXPPPPTXNXXXGXXXXXPXXXXPXXPPPXXXXXXPPPP 877
G PPPP P P PP PPPP
Sbjct: 346 GMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 386
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.36
Identities = 19/64 (29%), Positives = 19/64 (29%), Gaps = 4/64 (6%)
Frame = +2
Query: 698 PPXXXXXKXLPXAPXSPXXGXXXPPPPTXNXXXGXXXXXPXXXXPXXP----PPXXXXXX 865
PP P P P G PPPP P P P PP
Sbjct: 285 PPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMP 344
Query: 866 PPPP 877
PPPP
Sbjct: 345 PPPP 348
Score = 31.5 bits (68), Expect = 0.82
Identities = 18/62 (29%), Positives = 19/62 (30%)
Frame = +3
Query: 690 PXXPPXXXXXKXXPXPXXPPXXGXXXPPPQXKTXXXGXXXXPPXXXXXXXPPPXGTXXXP 869
P PP P P P PPP + G PP P P G P
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSS---GMWPPPPPPPPGRTPGPPGMPGMP 327
Query: 870 PP 875
PP
Sbjct: 328 PP 329
Score = 31.5 bits (68), Expect = 0.82
Identities = 17/59 (28%), Positives = 17/59 (28%)
Frame = +1
Query: 700 PPXXXXXKXXPGPXXPXXXGXXXPPPNXKPXXGXXXXXPXXXXXXXXPPXXXXXGPPPP 876
PP P P G PPP P G P PP PPPP
Sbjct: 337 PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 395
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/66 (28%), Positives = 19/66 (28%), Gaps = 4/66 (6%)
Frame = +3
Query: 690 PXXPPXXXXXKXXPXPXXPPXXGXXXPPPQXKTXXX----GXXXXPPXXXXXXXPPPXGT 857
P PP P P PP G PPP G PP PP
Sbjct: 282 PMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMG 341
Query: 858 XXXPPP 875
PPP
Sbjct: 342 GMPPPP 347
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +2
Query: 767 PPPPTXNXXXGXXXXXPXXXXPXXPPPXXXXXXPPPP 877
PPPP+ P PPP PPPP
Sbjct: 275 PPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPP 311
Score = 28.3 bits (60), Expect = 7.7
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +2
Query: 755 GXXXPPPPTXNXXXGXXXXXPXXXXPXXPPPXXXXXXPPPP 877
G PPPP P P PP PPPP
Sbjct: 356 GMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 396
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 32.7 bits (71), Expect = 0.36
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +2
Query: 728 PXAPXSPXXGXXXPPPPTXNXXXGXXXXXPXXXXPXXPPPXXXXXXPPPP 877
P P P PPPP P P P P PPPP
Sbjct: 530 PPRPAPPPVSSIPPPPPIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPP 579
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.5 bits (68), Expect = 0.82
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +3
Query: 744 PPXXGXXXPPPQXKTXXXGXXXXPPXXXXXXXPPPXGTXXXPPP 875
PP PPP + PP PPP T PPP
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP 275
Score = 31.5 bits (68), Expect = 0.82
Identities = 16/62 (25%), Positives = 18/62 (29%)
Frame = +3
Query: 690 PXXPPXXXXXKXXPXPXXPPXXGXXXPPPQXKTXXXGXXXXPPXXXXXXXPPPXGTXXXP 869
P PP PP PPP+ + PP PPP P
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 298
Query: 870 PP 875
PP
Sbjct: 299 PP 300
Score = 31.5 bits (68), Expect = 0.82
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +3
Query: 690 PXXPPXXXXXKXXPXPXXPPXXGXXXPPPQXKTXXXGXXXXPPXXXXXXXPPPXGTXXXP 869
P PP PP PPP PP PPP GT P
Sbjct: 272 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP-PQAGGSPPPAGTGSPP 330
Query: 870 PP 875
PP
Sbjct: 331 PP 332
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/58 (29%), Positives = 18/58 (31%)
Frame = +3
Query: 699 PPXXXXXKXXPXPXXPPXXGXXXPPPQXKTXXXGXXXXPPXXXXXXXPPPXGTXXXPP 872
PP P PP G PPP PP PPP G+ PP
Sbjct: 232 PPAGSPPPPPPPKGSPPLAGSGSPPP-----PPAAGSPPPPRTGSPPPPPTGSPPPPP 284
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/44 (29%), Positives = 14/44 (31%)
Frame = +2
Query: 746 PXXGXXXPPPPTXNXXXGXXXXXPXXXXPXXPPPXXXXXXPPPP 877
P PPPP + P PPP PPPP
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 276
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/48 (29%), Positives = 16/48 (33%)
Frame = +2
Query: 734 APXSPXXGXXXPPPPTXNXXXGXXXXXPXXXXPXXPPPXXXXXXPPPP 877
+P P PPP T + P PPP PPPP
Sbjct: 254 SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 301
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +2
Query: 734 APXSPXXGXXXPPPPTXNXXXGXXXXXPXXXXPXXPPPXXXXXXPPPP 877
+P P G PPPP P PPP PPPP
Sbjct: 288 SPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGS--PPPAGTGSPPPPP 333
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/62 (27%), Positives = 17/62 (27%), Gaps = 4/62 (6%)
Frame = +3
Query: 699 PPXXXXXKXXPXPXX----PPXXGXXXPPPQXKTXXXGXXXXPPXXXXXXXPPPXGTXXX 866
PP P P PP G PPP PP PPP
Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 306
Query: 867 PP 872
PP
Sbjct: 307 PP 308
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.5 bits (68), Expect = 0.82
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +3
Query: 744 PPXXGXXXPPPQXKTXXXGXXXXPPXXXXXXXPPPXGTXXXPPP 875
PP PPP + PP PPP T PPP
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP 296
Score = 31.5 bits (68), Expect = 0.82
Identities = 16/62 (25%), Positives = 18/62 (29%)
Frame = +3
Query: 690 PXXPPXXXXXKXXPXPXXPPXXGXXXPPPQXKTXXXGXXXXPPXXXXXXXPPPXGTXXXP 869
P PP PP PPP+ + PP PPP P
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 319
Query: 870 PP 875
PP
Sbjct: 320 PP 321
Score = 31.5 bits (68), Expect = 0.82
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +3
Query: 690 PXXPPXXXXXKXXPXPXXPPXXGXXXPPPQXKTXXXGXXXXPPXXXXXXXPPPXGTXXXP 869
P PP PP PPP PP PPP GT P
Sbjct: 293 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP-PQAGGSPPPAGTGSPP 351
Query: 870 PP 875
PP
Sbjct: 352 PP 353
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/58 (29%), Positives = 18/58 (31%)
Frame = +3
Query: 699 PPXXXXXKXXPXPXXPPXXGXXXPPPQXKTXXXGXXXXPPXXXXXXXPPPXGTXXXPP 872
PP P PP G PPP PP PPP G+ PP
Sbjct: 253 PPAGSPPPPPPPKGSPPLAGSGSPPP-----PPAAGSPPPPRTGSPPPPPTGSPPPPP 305
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/44 (29%), Positives = 14/44 (31%)
Frame = +2
Query: 746 PXXGXXXPPPPTXNXXXGXXXXXPXXXXPXXPPPXXXXXXPPPP 877
P PPPP + P PPP PPPP
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 297
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/48 (29%), Positives = 16/48 (33%)
Frame = +2
Query: 734 APXSPXXGXXXPPPPTXNXXXGXXXXXPXXXXPXXPPPXXXXXXPPPP 877
+P P PPP T + P PPP PPPP
Sbjct: 275 SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 322
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +2
Query: 734 APXSPXXGXXXPPPPTXNXXXGXXXXXPXXXXPXXPPPXXXXXXPPPP 877
+P P G PPPP P PPP PPPP
Sbjct: 309 SPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGS--PPPAGTGSPPPPP 354
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/62 (27%), Positives = 17/62 (27%), Gaps = 4/62 (6%)
Frame = +3
Query: 699 PPXXXXXKXXPXPXX----PPXXGXXXPPPQXKTXXXGXXXXPPXXXXXXXPPPXGTXXX 866
PP P P PP G PPP PP PPP
Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 327
Query: 867 PP 872
PP
Sbjct: 328 PP 329
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.5 bits (68), Expect = 0.82
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +3
Query: 744 PPXXGXXXPPPQXKTXXXGXXXXPPXXXXXXXPPPXGTXXXPPP 875
PP PPP + PP PPP T PPP
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPP 281
Score = 31.5 bits (68), Expect = 0.82
Identities = 16/62 (25%), Positives = 18/62 (29%)
Frame = +3
Query: 690 PXXPPXXXXXKXXPXPXXPPXXGXXXPPPQXKTXXXGXXXXPPXXXXXXXPPPXGTXXXP 869
P PP PP PPP+ + PP PPP P
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 304
Query: 870 PP 875
PP
Sbjct: 305 PP 306
Score = 31.5 bits (68), Expect = 0.82
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +3
Query: 690 PXXPPXXXXXKXXPXPXXPPXXGXXXPPPQXKTXXXGXXXXPPXXXXXXXPPPXGTXXXP 869
P PP PP PPP PP PPP GT P
Sbjct: 278 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP-PQAGGSPPPAGTGSPP 336
Query: 870 PP 875
PP
Sbjct: 337 PP 338
Score = 30.3 bits (65), Expect = 1.9
Identities = 17/58 (29%), Positives = 18/58 (31%)
Frame = +3
Query: 699 PPXXXXXKXXPXPXXPPXXGXXXPPPQXKTXXXGXXXXPPXXXXXXXPPPXGTXXXPP 872
PP P PP G PPP PP PPP G+ PP
Sbjct: 238 PPAGSPPPPPPPKGSPPLAGSGSPPP-----PPAAGSPPPPRTGSPPPPPTGSPPPPP 290
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/44 (29%), Positives = 14/44 (31%)
Frame = +2
Query: 746 PXXGXXXPPPPTXNXXXGXXXXXPXXXXPXXPPPXXXXXXPPPP 877
P PPPP + P PPP PPPP
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 282
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/48 (29%), Positives = 16/48 (33%)
Frame = +2
Query: 734 APXSPXXGXXXPPPPTXNXXXGXXXXXPXXXXPXXPPPXXXXXXPPPP 877
+P P PPP T + P PPP PPPP
Sbjct: 260 SPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPP 307
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +2
Query: 734 APXSPXXGXXXPPPPTXNXXXGXXXXXPXXXXPXXPPPXXXXXXPPPP 877
+P P G PPPP P PPP PPPP
Sbjct: 294 SPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGS--PPPAGTGSPPPPP 339
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/62 (27%), Positives = 17/62 (27%), Gaps = 4/62 (6%)
Frame = +3
Query: 699 PPXXXXXKXXPXPXX----PPXXGXXXPPPQXKTXXXGXXXXPPXXXXXXXPPPXGTXXX 866
PP P P PP G PPP PP PPP
Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGS 312
Query: 867 PP 872
PP
Sbjct: 313 PP 314
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 1.4
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = +2
Query: 737 PXSPXXGXXXPPPPTXNXXXGXXXXXPXXXXPXXPPPXXXXXXPPPP 877
P P G PPPP G P PPP PPPP
Sbjct: 75 PPPPGPGGIPPPPPMF--AGGIPPPPPMMGGIPPPPPMFGAPPPPPP 119
Score = 29.5 bits (63), Expect = 3.3
Identities = 15/49 (30%), Positives = 15/49 (30%)
Frame = +3
Query: 729 PXPXXPPXXGXXXPPPQXKTXXXGXXXXPPXXXXXXXPPPXGTXXXPPP 875
P PP G PP G PP PPP PPP
Sbjct: 70 PNGFIPPPPGPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPP 118
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +2
Query: 728 PXAPXSPXXGXXXPPPPTXNXXXGXXXXXPXXXXPXXPPPXXXXXXPPPP 877
P P P PPPP P P PP PPPP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +3
Query: 690 PXXPPXXXXXKXXPXPXXPPXXGXXXPPPQXKTXXXGXXXXPPXXXXXXXPPPXGTXXXP 869
P PP P P P PPP PP PPP G P
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP----PPPPPPGGCPPPP 772
Query: 870 PP 875
PP
Sbjct: 773 PP 774
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 728 PXAPXSPXXGXXXPPPPTXNXXXGXXXXXPXXXXPXXPPPXXXXXXPPPP 877
P P G PPPP G P PPP PPPP
Sbjct: 731 PPGGLPPITGGPPPPPPP-----GGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/60 (26%), Positives = 16/60 (26%)
Frame = +1
Query: 697 PPPXXXXXKXXPGPXXPXXXGXXXPPPNXKPXXGXXXXXPXXXXXXXXPPXXXXXGPPPP 876
PPP GP P G P P P PP PPPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +2
Query: 728 PXAPXSPXXGXXXPPPPTXNXXXGXXXXXPXXXXPXXPPPXXXXXXPPPP 877
P P P PPPP P P PP PPPP
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +3
Query: 690 PXXPPXXXXXKXXPXPXXPPXXGXXXPPPQXKTXXXGXXXXPPXXXXXXXPPPXGTXXXP 869
P PP P P P PPP PP PPP G P
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP----PPPPPPGGCPPPP 772
Query: 870 PP 875
PP
Sbjct: 773 PP 774
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 728 PXAPXSPXXGXXXPPPPTXNXXXGXXXXXPXXXXPXXPPPXXXXXXPPPP 877
P P G PPPP G P PPP PPPP
Sbjct: 731 PPGGLPPITGGPPPPPPP-----GGLPPISGGPPPPPPPPGGCPPPPPPP 775
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/60 (26%), Positives = 16/60 (26%)
Frame = +1
Query: 697 PPPXXXXXKXXPGPXXPXXXGXXXPPPNXKPXXGXXXXXPXXXXXXXXPPXXXXXGPPPP 876
PPP GP P G P P P PP PPPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +2
Query: 728 PXAPXSPXXGXXXPPPPTXNXXXGXXXXXPXXXXPXXPPPXXXXXXPPPP 877
P P P PPPP P P PP PPPP
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPP 346
Score = 29.5 bits (63), Expect = 3.3
Identities = 18/62 (29%), Positives = 18/62 (29%)
Frame = +3
Query: 690 PXXPPXXXXXKXXPXPXXPPXXGXXXPPPQXKTXXXGXXXXPPXXXXXXXPPPXGTXXXP 869
P PP P P P PPP PP PPP G P
Sbjct: 300 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPP----PPPPPPGGCPPPP 355
Query: 870 PP 875
PP
Sbjct: 356 PP 357
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 728 PXAPXSPXXGXXXPPPPTXNXXXGXXXXXPXXXXPXXPPPXXXXXXPPPP 877
P P G PPPP G P PPP PPPP
Sbjct: 314 PPGGLPPITGGPPPPPPP-----GGLPPISGGPPPPPPPPGGCPPPPPPP 358
Score = 28.7 bits (61), Expect = 5.8
Identities = 16/60 (26%), Positives = 16/60 (26%)
Frame = +1
Query: 697 PPPXXXXXKXXPGPXXPXXXGXXXPPPNXKPXXGXXXXXPXXXXXXXXPPXXXXXGPPPP 876
PPP GP P G P P P PP PPPP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +2
Query: 737 PXSPXXGXXXPPPPTXNXXXGXXXXXPXXXXPXXPPPXXXXXXPPPP 877
P P G PPPP PPP PPPP
Sbjct: 64 PPPPPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPPPP 110
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +2
Query: 737 PXSPXXGXXXPPPPTXNXXXGXXXXXPXXXXPXXPPPXXXXXXPPPP 877
P P G PPPP P PPP PPPP
Sbjct: 33 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPP-PPPKGTGTPPPPP 78
Score = 29.1 bits (62), Expect = 4.4
Identities = 14/44 (31%), Positives = 14/44 (31%)
Frame = +3
Query: 744 PPXXGXXXPPPQXKTXXXGXXXXPPXXXXXXXPPPXGTXXXPPP 875
PP G PPP PPP GT PPP
Sbjct: 66 PPPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGTGTPPPP 109
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +2
Query: 737 PXSPXXGXXXPPPPTXNXXXGXXXXXPXXXXPXXPPPXXXXXXPPPP 877
P P G PPPP P PPP PPPP
Sbjct: 96 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPP-PPPKGTGSPPPPP 141
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +2
Query: 737 PXSPXXGXXXPPPPTXNXXXGXXXXXPXXXXPXXPPPXXXXXXPPPP 877
P P G PPPP P PPP PPPP
Sbjct: 127 PPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPP-PPPKGTGSPPPPP 172
Score = 29.1 bits (62), Expect = 4.4
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +2
Query: 737 PXSPXXGXXXPPPPTXNXXXGXXXXXPXXXXPXXPPPXXXXXXPPPP 877
P P G PPPP P PPP PPPP
Sbjct: 158 PPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPP-PPPKGTGTPPPPP 203
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +2
Query: 737 PXSPXXGXXXPPPPTXNXXXGXXXXXPXXXXPXXPPPXXXXXXPPPP 877
P P G PPPP P PPP PPPP
Sbjct: 251 PPPPPKGTGSPPPPPTGEPQDLSGEGNASRRP--PPPPKGTGTPPPP 295
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,033,519
Number of Sequences: 27780
Number of extensions: 300301
Number of successful extensions: 1446
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2213393798
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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