Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_F22
         (861 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC100766-1|AAI00767.1|  180|Homo sapiens Xg blood group protein.       31   4.1  
U82130-1|AAC52083.1|  390|Homo sapiens tumor susceptibility prot...    31   7.1  
BC002487-1|AAH02487.1|  390|Homo sapiens tumor susceptibility ge...    31   7.1  
AK075231-1|BAC11488.1|  169|Homo sapiens protein ( Homo sapiens ...    30   9.4  

>BC100766-1|AAI00767.1|  180|Homo sapiens Xg blood group protein.
          Length = 180

 Score = 31.5 bits (68), Expect = 4.1
 Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
 Frame = +2

Query: 128 MANAQDPVRVVENADSVVINDPDP-FFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYE 304
           +A+A D     +  +S +   P P ++ QP   N    I  RP    P     P  +G  
Sbjct: 27  LADALDDPEPTKKPNSDIYPKPKPPYYPQPENPNSGGNIYPRP---KPRPQPQPGNSG-- 81

Query: 305 PIDNGAYY--VDRPQGRPYFKPTPFPGARGG 391
             ++G Y+  VDR  GR   +P P P A GG
Sbjct: 82  --NSGGYFNDVDRDDGRYPPRPRPRPPAGGG 110


>U82130-1|AAC52083.1|  390|Homo sapiens tumor susceptibility protein
           protein.
          Length = 390

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
 Frame = +2

Query: 176 VVINDPDPFFAQPTVGNGYEPID-----NRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRP 340
           VV  D  P F++P +   Y P       N  Y+   P   +P  +GY P  +G      P
Sbjct: 133 VVFGDEPPVFSRP-ISASYPPYQATGPPNTSYMPGMPGGISPYPSGYPPNPSGYPGCPYP 191

Query: 341 QGRPY 355
            G PY
Sbjct: 192 PGGPY 196


>BC002487-1|AAH02487.1|  390|Homo sapiens tumor susceptibility gene
           101 protein.
          Length = 390

 Score = 30.7 bits (66), Expect = 7.1
 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
 Frame = +2

Query: 176 VVINDPDPFFAQPTVGNGYEPID-----NRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRP 340
           VV  D  P F++P +   Y P       N  Y+   P   +P  +GY P  +G      P
Sbjct: 133 VVFGDEPPVFSRP-ISASYPPYQATGPPNTSYMPGMPGGISPYPSGYPPNPSGYPGCPYP 191

Query: 341 QGRPY 355
            G PY
Sbjct: 192 PGGPY 196


>AK075231-1|BAC11488.1|  169|Homo sapiens protein ( Homo sapiens
           cDNA FLJ90750 fis, clone PLACE2000118, weakly similar to
           WISKOTT-ALDRICH SYNDROME PROTEIN HOMOLOG. ).
          Length = 169

 Score = 30.3 bits (65), Expect = 9.4
 Identities = 15/48 (31%), Positives = 17/48 (35%)
 Frame = +1

Query: 700 FLAXXXPPPPGXTXFAXWGPXPVSPPHXXXXPXXSXXAXXXPXPPKXG 843
           F A   PPPP    +    P P+S P     P         P PP  G
Sbjct: 33  FAAPPPPPPPPAADYPTLPPPPLSQPTGGAPPPPPPPPPGPPPPPFTG 80


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,434,674
Number of Sequences: 237096
Number of extensions: 2481996
Number of successful extensions: 13787
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13751
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)