Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_F22
(861 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF002198-10|AAF99937.1| 471|Caenorhabditis elegans Hypothetical... 32 0.46
U00063-5|AAK18963.1| 182|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical p... 30 2.4
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 7.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 7.4
U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical pr... 28 7.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 7.4
U40029-3|AAA81124.1| 269|Caenorhabditis elegans Hypothetical pr... 28 9.8
>AF002198-10|AAF99937.1| 471|Caenorhabditis elegans Hypothetical
protein F35F10.12 protein.
Length = 471
Score = 32.3 bits (70), Expect = 0.46
Identities = 26/70 (37%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +2
Query: 188 DPDPFFAQPT-VGNGYEPIDNRPYIVNPPKDYN--PNGNGYEPIDNGAYYVDRPQGRPYF 358
DP+ +QPT +G G P P V PP Y P +G DNGA P G PY
Sbjct: 345 DPNLPPSQPTPIGGGVAPAGVAPAGVVPPPGYGFLPMTDG---TDNGAGDTPYPVGPPYP 401
Query: 359 KPTPFPGARG 388
P P G
Sbjct: 402 SDVPAPYPSG 411
>U00063-5|AAK18963.1| 182|Caenorhabditis elegans Hypothetical
protein F56C9.8 protein.
Length = 182
Score = 30.3 bits (65), Expect = 1.8
Identities = 22/100 (22%), Positives = 38/100 (38%), Gaps = 2/100 (2%)
Frame = +2
Query: 50 LIFSPVITRDHIKMKFFMIFVLALLAMANAQDPVRVVENADSVVINDPDPFFA--QPTVG 223
++F+ VI + F + A++ + D R+ +S N P + QP
Sbjct: 22 VVFAIVIGGVLLLAAFIYVIYAAVVRSMRSDDKQRLHSGRNSAQWNQPQQQYREQQPASD 81
Query: 224 NGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQ 343
Y P + Y N P N + P+ + Y +PQ
Sbjct: 82 FPYNPAPTQNYDYNAPIRTPVNPTSFTPVPSVTQYSTQPQ 121
>Z81103-7|CAB03211.3| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +2
Query: 167 ADSVVINDPDPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 307
+ SV+ P QP VGN Y+P P +PP Y GY P
Sbjct: 80 SQSVLFEQPQ---IQPLVGNSYDP----PVRFDPPYAYRATATGYMP 119
>Z81103-5|CAD56592.2| 550|Caenorhabditis elegans Hypothetical
protein M04G12.4b protein.
Length = 550
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +2
Query: 167 ADSVVINDPDPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 307
+ SV+ P QP VGN Y+P P +PP Y GY P
Sbjct: 51 SQSVLFEQPQ---IQPLVGNSYDP----PVRFDPPYAYRATATGYMP 90
>Z81088-12|CAD56587.2| 579|Caenorhabditis elegans Hypothetical
protein M04G12.4a protein.
Length = 579
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +2
Query: 167 ADSVVINDPDPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEP 307
+ SV+ P QP VGN Y+P P +PP Y GY P
Sbjct: 80 SQSVLFEQPQ---IQPLVGNSYDP----PVRFDPPYAYRATATGYMP 119
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +1
Query: 718 PPPPGXTXFAXWGPXPVSPPHXXXXPXXSXXAXXXPXPP 834
PPPPG GP P PP P S P PP
Sbjct: 729 PPPPGGLPPITGGPPP--PPPPGGLPPISGGPPPPPPPP 765
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +1
Query: 718 PPPPGXTXFAXWGPXPVSPPHXXXXPXXSXXAXXXPXPP 834
PPPPG GP P PP P S P PP
Sbjct: 729 PPPPGGLPPITGGPPP--PPPPGGLPPISGGPPPPPPPP 765
>U21319-7|AAL16307.1| 469|Caenorhabditis elegans Hypothetical
protein C30G12.1 protein.
Length = 469
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 276 TTTLMETATNLSTTVHITWTVPKADLTSSLPLS 374
TTT M T T ST + T T P+ ++P S
Sbjct: 294 TTTTMTTTTRTSTAIPTTTTTPRQISLQTIPFS 326
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +1
Query: 718 PPPPGXTXFAXWGPXPVSPPHXXXXPXXSXXAXXXPXPP 834
PPPPG GP P PP P S P PP
Sbjct: 312 PPPPGGLPPITGGPPP--PPPPGGLPPISGGPPPPPPPP 348
>U40029-3|AAA81124.1| 269|Caenorhabditis elegans Hypothetical
protein F10G7.6 protein.
Length = 269
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +2
Query: 233 EPIDNRPYI-VNPPKDYNPNGNGYEPIDNG 319
EP D P + V PP + PN NG P NG
Sbjct: 239 EPDDPAPPLPVAPPPLHGPNNNGNGPAQNG 268
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,263,986
Number of Sequences: 27780
Number of extensions: 339407
Number of successful extensions: 897
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 885
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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