Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_F17
(883 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 235 4e-62
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 235 4e-62
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 235 4e-62
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 235 4e-62
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 235 4e-62
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 235 4e-62
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 235 4e-62
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 235 4e-62
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 235 4e-62
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 231 7e-61
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 229 2e-60
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 137 8e-33
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 110 1e-24
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 108 6e-24
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 100 3e-21
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 100 3e-21
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 100 3e-21
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 94 1e-19
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 69 3e-12
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 36 0.029
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 36 0.029
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 32 0.47
U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protei... 31 1.4
U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protei... 29 4.4
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 29 4.4
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 29 5.8
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 235 bits (574), Expect = 4e-62
Identities = 121/160 (75%), Positives = 123/160 (76%)
Frame = +2
Query: 275 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 454
P +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 455 PEEHPVLLTEAPLNPKANREXMXXIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXXX 634
PEEHPVLLTEAPLNPKANRE M IMFETFNTPAMYVAIQAVLSLYAS
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Query: 635 KVXPTPWPIXEGYPLPPXHPGVWT*PGRXLXDYLMNIXTE 754
V T PI EGY LP + GR L DYLM I TE
Sbjct: 159 GVTHTV-PIYEGYALPHAILRL-DLAGRDLTDYLMKILTE 196
Score = 95.5 bits (227), Expect = 4e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 160 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 288
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 235 bits (574), Expect = 4e-62
Identities = 121/160 (75%), Positives = 123/160 (76%)
Frame = +2
Query: 275 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 454
P +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 455 PEEHPVLLTEAPLNPKANREXMXXIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXXX 634
PEEHPVLLTEAPLNPKANRE M IMFETFNTPAMYVAIQAVLSLYAS
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 158
Query: 635 KVXPTPWPIXEGYPLPPXHPGVWT*PGRXLXDYLMNIXTE 754
V T PI EGY LP + GR L DYLM I TE
Sbjct: 159 GVTHTV-PIYEGYALPHAILRL-DLAGRDLTDYLMKILTE 196
Score = 94.3 bits (224), Expect = 1e-19
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = +1
Query: 160 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 288
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 235 bits (574), Expect = 4e-62
Identities = 121/160 (75%), Positives = 123/160 (76%)
Frame = +2
Query: 275 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 454
P +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 455 PEEHPVLLTEAPLNPKANREXMXXIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXXX 634
PEEHPVLLTEAPLNPKANRE M IMFETFNTPAMYVAIQAVLSLYAS
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Query: 635 KVXPTPWPIXEGYPLPPXHPGVWT*PGRXLXDYLMNIXTE 754
V T PI EGY LP + GR L DYLM I TE
Sbjct: 159 GVTHTV-PIYEGYALPHAILRL-DLAGRDLTDYLMKILTE 196
Score = 95.5 bits (227), Expect = 4e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 160 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 288
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 235 bits (574), Expect = 4e-62
Identities = 121/160 (75%), Positives = 123/160 (76%)
Frame = +2
Query: 275 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 454
P +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 455 PEEHPVLLTEAPLNPKANREXMXXIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXXX 634
PEEHPVLLTEAPLNPKANRE M IMFETFNTPAMYVAIQAVLSLYAS
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Query: 635 KVXPTPWPIXEGYPLPPXHPGVWT*PGRXLXDYLMNIXTE 754
V T PI EGY LP + GR L DYLM I TE
Sbjct: 159 GVTHTV-PIYEGYALPHAILRL-DLAGRDLTDYLMKILTE 196
Score = 95.5 bits (227), Expect = 4e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 160 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 288
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 235 bits (574), Expect = 4e-62
Identities = 121/160 (75%), Positives = 123/160 (76%)
Frame = +2
Query: 275 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 454
P +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 455 PEEHPVLLTEAPLNPKANREXMXXIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXXX 634
PEEHPVLLTEAPLNPKANRE M IMFETFNTPAMYVAIQAVLSLYAS
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Query: 635 KVXPTPWPIXEGYPLPPXHPGVWT*PGRXLXDYLMNIXTE 754
V T PI EGY LP + GR L DYLM I TE
Sbjct: 159 GVTHTV-PIYEGYALPHAILRL-DLAGRDLTDYLMKILTE 196
Score = 95.5 bits (227), Expect = 4e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 160 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 288
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 235 bits (574), Expect = 4e-62
Identities = 121/160 (75%), Positives = 123/160 (76%)
Frame = +2
Query: 275 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 454
P +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 455 PEEHPVLLTEAPLNPKANREXMXXIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXXX 634
PEEHPVLLTEAPLNPKANRE M IMFETFNTPAMYVAIQAVLSLYAS
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 158
Query: 635 KVXPTPWPIXEGYPLPPXHPGVWT*PGRXLXDYLMNIXTE 754
V T PI EGY LP + GR L DYLM I TE
Sbjct: 159 GVTHTV-PIYEGYALPHAILRL-DLAGRDLTDYLMKILTE 196
Score = 92.7 bits (220), Expect = 3e-19
Identities = 39/43 (90%), Positives = 43/43 (100%)
Frame = +1
Query: 160 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 288
MCD++VAAL++DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALILDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 235 bits (574), Expect = 4e-62
Identities = 121/160 (75%), Positives = 123/160 (76%)
Frame = +2
Query: 275 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 454
P +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 455 PEEHPVLLTEAPLNPKANREXMXXIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXXX 634
PEEHPVLLTEAPLNPKANRE M IMFETFNTPAMYVAIQAVLSLYAS
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Query: 635 KVXPTPWPIXEGYPLPPXHPGVWT*PGRXLXDYLMNIXTE 754
V T PI EGY LP + GR L DYLM I TE
Sbjct: 159 GVTHTV-PIYEGYALPHAILRL-DLAGRDLTDYLMKILTE 196
Score = 95.5 bits (227), Expect = 4e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 160 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 288
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 235 bits (574), Expect = 4e-62
Identities = 121/160 (75%), Positives = 123/160 (76%)
Frame = +2
Query: 275 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 454
P +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 25 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 84
Query: 455 PEEHPVLLTEAPLNPKANREXMXXIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXXX 634
PEEHPVLLTEAPLNPKANRE M IMFETFNTPAMYVAIQAVLSLYAS
Sbjct: 85 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 144
Query: 635 KVXPTPWPIXEGYPLPPXHPGVWT*PGRXLXDYLMNIXTE 754
V T PI EGY LP + GR L DYLM I TE
Sbjct: 145 GVTHTV-PIYEGYALPHAILRL-DLAGRDLTDYLMKILTE 182
Score = 56.8 bits (131), Expect = 2e-08
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +1
Query: 214 KAGFAGDDAPRAVFPSIVGRPRHQG 288
+AGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 5 RAGFAGDDAPRAVFPSIVGRPRHQG 29
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 235 bits (574), Expect = 4e-62
Identities = 121/160 (75%), Positives = 123/160 (76%)
Frame = +2
Query: 275 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 454
P +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 98
Query: 455 PEEHPVLLTEAPLNPKANREXMXXIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXXX 634
PEEHPVLLTEAPLNPKANRE M IMFETFNTPAMYVAIQAVLSLYAS
Sbjct: 99 PEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGD 158
Query: 635 KVXPTPWPIXEGYPLPPXHPGVWT*PGRXLXDYLMNIXTE 754
V T PI EGY LP + GR L DYLM I TE
Sbjct: 159 GVTHTV-PIYEGYALPHAILRL-DLAGRDLTDYLMKILTE 196
Score = 95.5 bits (227), Expect = 4e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 160 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 288
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 231 bits (564), Expect = 7e-61
Identities = 117/160 (73%), Positives = 122/160 (76%)
Frame = +2
Query: 275 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVA 454
P +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+A
Sbjct: 38 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIA 97
Query: 455 PEEHPVLLTEAPLNPKANREXMXXIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXXX 634
PEEHPVLLTEAPLNPK+NRE M IMFETFNTPAMYV IQAVLSLYAS
Sbjct: 98 PEEHPVLLTEAPLNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGD 157
Query: 635 KVXPTPWPIXEGYPLPPXHPGVWT*PGRXLXDYLMNIXTE 754
V T PI EGY LP + GR L DY+M I TE
Sbjct: 158 GVTHTV-PIYEGYALPHAIQRL-DLAGRDLTDYMMKILTE 195
Score = 89.0 bits (211), Expect = 4e-18
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +1
Query: 166 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 288
+EE+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 2 EEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 42
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 229 bits (560), Expect = 2e-60
Identities = 118/154 (76%), Positives = 119/154 (77%)
Frame = +2
Query: 293 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 472
MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV
Sbjct: 1 MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 60
Query: 473 LLTEAPLNPKANREXMXXIMFETFNTPAMYVAIQAVLSLYASXXXXXXXXXXXXKVXPTP 652
LLTEAPLNPKANRE M IMFETFNTPAMYVAIQAVLSLYAS V T
Sbjct: 61 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTV 120
Query: 653 WPIXEGYPLPPXHPGVWT*PGRXLXDYLMNIXTE 754
PI EGY LP + GR L DYLM I TE
Sbjct: 121 -PIYEGYALPHAILRL-DLAGRDLTDYLMKILTE 152
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 137 bits (332), Expect = 8e-33
Identities = 61/109 (55%), Positives = 80/109 (73%), Gaps = 1/109 (0%)
Frame = +2
Query: 275 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRV 451
P VM G D ++G +A+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++
Sbjct: 41 PKYHRVMAGGLDGDIFIGPKAESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKI 100
Query: 452 APEEHPVLLTEAPLNPKANREXMXXIMFETFNTPAMYVAIQAVLSLYAS 598
PEEHPVLLT+APLNP NRE I FETFN PA+Y+ +QAVLSLYA+
Sbjct: 101 FPEEHPVLLTDAPLNPLKNRERSAEIFFETFNVPALYIQMQAVLSLYAT 149
Score = 46.8 bits (106), Expect = 2e-05
Identities = 18/33 (54%), Positives = 26/33 (78%)
Frame = +1
Query: 184 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRH 282
+V+DNGSG+ KAGFAG+ P+ F + VGRP++
Sbjct: 11 VVIDNGSGVIKAGFAGEQQPKVRFANFVGRPKY 43
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 110 bits (264), Expect = 1e-24
Identities = 53/104 (50%), Positives = 66/104 (63%), Gaps = 1/104 (0%)
Frame = +2
Query: 290 VMVGMGQKDSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEH 466
V G+ D ++GDEA S T+KYPI HGIV +WD ME+ W + LR PE+H
Sbjct: 56 VGAGIDDLDFFIGDEALSPAATNYTVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDH 115
Query: 467 PVLLTEAPLNPKANREXMXXIMFETFNTPAMYVAIQAVLSLYAS 598
LLTE PLN NRE IMFE+FN P +Y+A+QAVL+L AS
Sbjct: 116 FFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALTAS 159
Score = 36.7 bits (81), Expect = 0.022
Identities = 14/36 (38%), Positives = 23/36 (63%)
Frame = +1
Query: 160 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 267
M ++ A V+DNG+G K G+AG+ P+ + PS +
Sbjct: 1 MSAHQLPACVIDNGTGYTKLGYAGNTEPQFIIPSAI 36
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 108 bits (259), Expect = 6e-24
Identities = 50/96 (52%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
Frame = +2
Query: 311 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEA 487
KD VG+E R +L + YP+++GIV NWDDM +W HTF E L + P+E +LLTE
Sbjct: 53 KDLMVGEECSQLRQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEP 112
Query: 488 PLNPKANREXMXXIMFETFNTPAMYVAIQAVLSLYA 595
PLNP +NRE M +MFE + ++YVA+QAVL+LYA
Sbjct: 113 PLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYA 148
Score = 45.6 bits (103), Expect = 5e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +1
Query: 184 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 276
+VVDNG+G K G+AG + P +FPS+VGRP
Sbjct: 9 IVVDNGTGFVKCGYAGTNFPAHIFPSMVGRP 39
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 99.5 bits (237), Expect = 3e-21
Identities = 45/48 (93%), Positives = 46/48 (95%)
Frame = +2
Query: 275 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 418
P +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 94.3 bits (224), Expect = 1e-19
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = +1
Query: 160 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 288
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 99.5 bits (237), Expect = 3e-21
Identities = 45/48 (93%), Positives = 46/48 (95%)
Frame = +2
Query: 275 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 418
P +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 95.5 bits (227), Expect = 4e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 160 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 288
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 99.5 bits (237), Expect = 3e-21
Identities = 45/48 (93%), Positives = 46/48 (95%)
Frame = +2
Query: 275 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 418
P +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKI 86
Score = 95.5 bits (227), Expect = 4e-20
Identities = 42/43 (97%), Positives = 43/43 (100%)
Frame = +1
Query: 160 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 288
MCD+EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 94.3 bits (224), Expect = 1e-19
Identities = 41/43 (95%), Positives = 43/43 (100%)
Frame = +1
Query: 160 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 288
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQG 43
Score = 93.9 bits (223), Expect = 1e-19
Identities = 42/45 (93%), Positives = 43/45 (95%)
Frame = +2
Query: 275 PAIRGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 409
P +GVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 39 PRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDM 83
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 69.3 bits (162), Expect = 3e-12
Identities = 31/74 (41%), Positives = 46/74 (62%)
Frame = +2
Query: 374 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREXMXXIMFETFNTP 553
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A RE + IMFE F P
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQVP 153
Query: 554 AMYVAIQAVLSLYA 595
A Y++ VLS +A
Sbjct: 154 AYYLSKNVVLSCFA 167
Score = 33.5 bits (73), Expect = 0.20
Identities = 14/33 (42%), Positives = 21/33 (63%)
Frame = +1
Query: 169 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIV 267
+EV+ LV D GS + GFAG++ P+ PS +
Sbjct: 9 DEVSGLVFDAGSQSFRVGFAGEEYPKGDIPSYI 41
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 36.3 bits (80), Expect = 0.029
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = +2
Query: 308 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 481
+K +V E + +L Y PIE G V NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 482 EAPLNPKANREXMXXIMFETF 544
+ A + I+F+ F
Sbjct: 98 DNNYLIPALPDVSSEILFDYF 118
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 36.3 bits (80), Expect = 0.029
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
Frame = +2
Query: 308 QKDSYVGDEAQSKRGILTLKY--PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLT 481
+K +V E + +L Y PIE G V NWD ++IW TF + V + LT
Sbjct: 39 KKRVFVAHEQEECSDKFSLFYVRPIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALT 97
Query: 482 EAPLNPKANREXMXXIMFETF 544
+ A + I+F+ F
Sbjct: 98 DNNYLIPALPDVSSEILFDYF 118
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 32.3 bits (70), Expect = 0.47
Identities = 18/59 (30%), Positives = 22/59 (37%), Gaps = 2/59 (3%)
Frame = +3
Query: 441 SCVSPPRNTQSCSLRLPSTPRPTERX*XXSCSKHS--TRPPCTSPSKPCSRCTRPVVPP 611
+C PR + SC +P P P C S P C P P + C P PP
Sbjct: 69 NCCGAPRPSPSCCPYVPPAPLPPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPP 127
>U80444-2|AAB37788.1| 305|Caenorhabditis elegans Collagen protein
58 protein.
Length = 305
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
Frame = +1
Query: 169 EEVAALVVDNGS-GMCKAGFAGDDAPRAV--FPSIVGRPRHQGRDGRYGTEG 315
++++ L D G C AG G PR P I G P G GR+GT G
Sbjct: 146 DDISVLRHDPGRCAQCPAGPMGPPGPRGPPGVPGITGAPGLDGIPGRHGTPG 197
>U70849-7|AAF99925.2| 332|Caenorhabditis elegans Collagen protein
111 protein.
Length = 332
Score = 29.1 bits (62), Expect = 4.4
Identities = 16/34 (47%), Positives = 17/34 (50%)
Frame = +1
Query: 226 AGDDAPRAVFPSIVGRPRHQGRDGRYGTEGLLCR 327
AG PR P VG P QGRDG G G + R
Sbjct: 147 AGPPGPRGA-PGSVGEPGPQGRDGMGGRPGNMGR 179
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 29.1 bits (62), Expect = 4.4
Identities = 24/86 (27%), Positives = 33/86 (38%), Gaps = 6/86 (6%)
Frame = +3
Query: 444 CVSPPRNTQSCSLRLPSTPRPTERX*XXSCSKHSTRPPCTSPSKP----C-SRCTRPVVP 608
CV Q C+ + +PT + C + P C PS P C S C PVV
Sbjct: 212 CVQQQFPVQQCTQQCTLECQPTCQQAVPQCQQQCA-PQCQQPSAPQCQQCQSACQSPVVA 270
Query: 609 PGIV-LGLRGRCXPHRGPSXKDTHFP 683
P I+ L + +C P + P
Sbjct: 271 PQIITLEVVPQCQQQCAPQCQQPAAP 296
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 28.7 bits (61), Expect = 5.8
Identities = 15/57 (26%), Positives = 23/57 (40%)
Frame = +3
Query: 429 PSTMSCVSPPRNTQSCSLRLPSTPRPTERX*XXSCSKHSTRPPCTSPSKPCSRCTRP 599
P+T +P T + R P P P R ++ T P T+ +P + RP
Sbjct: 313 PTTPRATTPLATTPLATTRAPLPPSPPPRTSKRPVTQAPTTPRATTTRRPTTTTPRP 369
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,632,899
Number of Sequences: 27780
Number of extensions: 404140
Number of successful extensions: 1454
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1244
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1435
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2223883816
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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