Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_F16
(931 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 42 9e-05
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 38 0.002
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 37 0.004
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 36 0.006
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.18
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 31 0.18
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.31
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.40
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 1.2
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 28 1.6
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 27 2.8
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 27 2.8
SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 27 5.0
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 24 5.9
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 26 6.6
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 6.6
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 26 6.6
SPBP8B7.16c |dbp2||ATP-dependent RNA helicase Dbp2|Schizosacchar... 26 8.7
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 42.3 bits (95), Expect = 9e-05
Identities = 20/59 (33%), Positives = 21/59 (35%)
Frame = +2
Query: 479 KKXXFXXPPPPPXXSXXXGXXXXPPKXPXPGSXXFFXKTPPPPPXXKXXXPPPXPPXXP 655
+K PPPPP P P P PPPPP PPP PP P
Sbjct: 725 QKLLLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 33.9 bits (74), Expect = 0.033
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 773 PXPPPPXXXXPPPPXPPXPXPTQNQXXGXGGXXPQXXXXXXXXXPXPPXP 922
P PPPP P P P P P G P P PP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 33.5 bits (73), Expect = 0.043
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 770 PPXPPPPXXXXPPPPXPPXPXP 835
PP PPPP PP PP P P
Sbjct: 762 PPPPPPPGVAGAGPPPPPPPPP 783
Score = 31.9 bits (69), Expect = 0.13
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 3/23 (13%)
Frame = +2
Query: 770 PPXPPPP---XXXXPPPPXPPXP 829
PP PPPP PPPP PP P
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.3 bits (65), Expect = 0.40
Identities = 16/54 (29%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Frame = +2
Query: 767 NPPXPPPPXXXXPPPPXP-PXPXPTQNQXXGXGGXXPQXXXXXXXXXPXPPXPS 925
+PP PPP P P P P P P P P PP P+
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784
Score = 29.9 bits (64), Expect = 0.53
Identities = 24/79 (30%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Frame = +3
Query: 627 RPPPPPPPXXXXXXXSPXXKKXXXPPGGXLXXFFXXAGXGGGGAXGXTPXXPPPP--XXX 800
+ PPPPPP +P PP + G P PPPP
Sbjct: 730 KSPPPPPPAVIVPTPAPAP--IPVPPPAPIM--------------GGPPPPPPPPGVAGA 773
Query: 801 XPPPPXPPXXXPPKTKXXG 857
PPPP PP PP G
Sbjct: 774 GPPPPPPP---PPAVSAGG 789
Score = 26.6 bits (56), Expect = 5.0
Identities = 13/42 (30%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Frame = +2
Query: 500 PPPPPXXSXXXGXXXXPPKXP--XPGSXXFFXKTPPPPPXXK 619
PPPPP G PP P G ++ P P K
Sbjct: 763 PPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEPK 804
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 37.9 bits (84), Expect = 0.002
Identities = 35/107 (32%), Positives = 35/107 (32%), Gaps = 1/107 (0%)
Frame = -1
Query: 820 GXGGGGXXXXGGGGXXGVXPXAPPPPXPAXXKXKXRXPPGGXXFFXXXGXXXXXXXXGGG 641
G GGG GGG PPP P GG F G GG
Sbjct: 184 GHNGGGFGGFGGGSGG-------PPPGP-----------GGFGGFGGFGGEGHHHGGHGG 225
Query: 640 GGGGRXXFXXGGGGGGFXKKXXGXXXRXFGGG-GXXXXXXGXXGGGG 503
GGG F G GG G G FGGG G G GG G
Sbjct: 226 FGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 29.5 bits (63), Expect = 0.71
Identities = 14/24 (58%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -2
Query: 834 GXGXGGXGGG-GXXXXGGGGXGGF 766
G G GG GGG G G GG GGF
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGF 210
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 4/44 (9%)
Frame = -2
Query: 873 GXXPPXPXXWFWVGXGXGGXGGGGXXXXG----GGGXGGFXXXP 754
G PP P + G GG GG G G GGG GGF P
Sbjct: 198 GGPPPGPGGF----GGFGGFGGEGHHHGGHGGFGGGPGGFEGGP 237
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -2
Query: 834 GXGXGGXGGGGXXXXGGGGXGGFXXXP 754
G G G G GG GGG GGF P
Sbjct: 239 GFGGGPGGFGGGLGGFGGGPGGFGGGP 265
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/28 (50%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Frame = -2
Query: 834 GXGXGGXGGGGXXXXG-GGGXGGFXXXP 754
G GG GG G G GGG GGF P
Sbjct: 231 GGFEGGPGGFGGGPGGFGGGLGGFGGGP 258
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 37.1 bits (82), Expect = 0.004
Identities = 39/149 (26%), Positives = 45/149 (30%), Gaps = 6/149 (4%)
Frame = +2
Query: 500 PPPPPXXSXXXGXXXXPPKX------PXPGSXXFFXKTPPPPPXXKXXXPPPXPPXXPXX 661
PPPPP S G PP+ P P S + PPP + PP PP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPP----- 392
Query: 662 XXXXPXXXKKXXPPRGXSXFXFXXRXXGGXGGXXXNPPXPPPPXXXXPPPPXPPXPXPTQ 841
P PP G + PP P PP PP PP P+
Sbjct: 393 -PAIPGRSAPALPPLGNA-------------SRTSTPPVPTPPSL---PPSAPPSLPPSA 435
Query: 842 NQXXGXGGXXPQXXXXXXXXXPXPPXPSG 928
G P PP P+G
Sbjct: 436 PPSLPMGA--PAAPPLPPSAPIAPPLPAG 462
Score = 32.7 bits (71), Expect = 0.076
Identities = 31/135 (22%), Positives = 34/135 (25%), Gaps = 12/135 (8%)
Frame = +2
Query: 470 PXXKKXXFXXPPPPPXXSXXXGXXXXPPKXPXPGSXXFFXKTPPPPPXXKXXXPPPXPPX 649
P + P PPP G PP P P PP PP
Sbjct: 241 PPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRP----IAPVSMNPAINSTSKPPLPPPS 296
Query: 650 XPXXXXXXPXXXKKXXPPRGXSXFXFXXRXXGGXGGXXXNPPXPPPPXXXXP-------- 805
K+ PP S G PP PPPP
Sbjct: 297 SRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQ 356
Query: 806 ----PPPXPPXPXPT 838
PPP PP P+
Sbjct: 357 GRSAPPPPPPRSAPS 371
Score = 29.9 bits (64), Expect = 0.53
Identities = 28/101 (27%), Positives = 28/101 (27%)
Frame = +3
Query: 627 RPPPPPPPXXXXXXXSPXXKKXXXPPGGXLXXFFXXAGXGGGGAXGXTPXXPPPPXXXXP 806
RPPPPPPP P G A G P PP
Sbjct: 310 RPPPPPPPSRRNRGKPPIGN------GSSNSSLPPPPPPPRSNAAGSIPL---PPQGRSA 360
Query: 807 PPPXPPXXXPPKTKXXGXGGXXHXXXRXXXXXHPPPPXXPG 929
PPP PP P G R PPP PG
Sbjct: 361 PPPPPPRSAP----STGRQPPPLSSSRAVSNPPAPPPAIPG 397
Score = 29.1 bits (62), Expect = 0.93
Identities = 30/113 (26%), Positives = 31/113 (27%), Gaps = 1/113 (0%)
Frame = +2
Query: 500 PPPPPXXSXXXGXXXXPPKXPXPGSXXFFXKTPPP-PPXXKXXXPPPXPPXXPXXXXXXP 676
PP PP PP + TPP PP PP PP P P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 677 XXXKKXXPPRGXSXFXFXXRXXGGXGGXXXNPPXPPPPXXXXPPPPXPPXPXP 835
PP G PP PP P PP P P P
Sbjct: 448 PL-----PPSAPIAPPLP-------AGMPAAPPLPPAA----PAPPPAPAPAP 484
Score = 27.9 bits (59), Expect = 2.2
Identities = 20/77 (25%), Positives = 21/77 (27%), Gaps = 7/77 (9%)
Frame = +3
Query: 630 PPPPPPPXXXXXXXSPXX-------KKXXXPPGGXLXXFFXXAGXGGGGAXGXTPXXPPP 788
PPPPPP P PP G + TP P P
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420
Query: 789 PXXXXPPPPXPPXXXPP 839
P PP P PP
Sbjct: 421 PSLPPSAPPSLPPSAPP 437
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 36.3 bits (80), Expect = 0.006
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +2
Query: 767 NPPXPPPPXXXXPPPPXPPXPXP 835
NPP PPPP PP PP P P
Sbjct: 8 NPPPPPPPPGFEPPSQPPPPPPP 30
Score = 29.9 bits (64), Expect = 0.53
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Frame = +3
Query: 762 GXTPXXPPPPXXXXP--PPPXPPXXXPPKTK 848
G P PPPP P PPP PP K K
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPPGYVKKRK 37
Score = 28.3 bits (60), Expect = 1.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 596 PPPPPXXKXXXPPPXPPXXP 655
PPPPP PP PP P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPP 28
Score = 27.5 bits (58), Expect = 2.8
Identities = 12/25 (48%), Positives = 12/25 (48%), Gaps = 3/25 (12%)
Frame = +2
Query: 770 PPXPPPPXXXXP---PPPXPPXPXP 835
PP PPP P PP PP P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 26.2 bits (55), Expect = 6.6
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 789 PXXXXPPPPXPPXXXPP 839
P PPPP PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPP 21
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 501 PPPPPXXPXXXXXXPPPP 554
PPPPP P PPP
Sbjct: 9 PPPPPPPPGFEPPSQPPP 26
Score = 25.8 bits (54), Expect(2) = 0.16
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 501 PPPPPXXPXXXXXXPPPP 554
PPPPP PPPP
Sbjct: 12 PPPPPGFEPPSQPPPPPP 29
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 596 PPPPPXXKXXXPPPXPP 646
PPPP PPP PP
Sbjct: 13 PPPPGFEPPSQPPPPPP 29
Score = 24.2 bits (50), Expect(2) = 0.16
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +3
Query: 627 RPPPPPPP 650
+PPPPPPP
Sbjct: 23 QPPPPPPP 30
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 31.5 bits (68), Expect = 0.18
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +2
Query: 770 PPXPPPPXXXXPPPPXPPXP 829
P PPPP PPP PP P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMP 1724
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/25 (40%), Positives = 11/25 (44%)
Frame = +2
Query: 770 PPXPPPPXXXXPPPPXPPXPXPTQN 844
PP P P PP PP P P +
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLPASS 1739
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/33 (33%), Positives = 12/33 (36%)
Frame = +2
Query: 548 PPKXPXPGSXXFFXKTPPPPPXXKXXXPPPXPP 646
PP P + PPPP PP PP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPP 1722
Score = 27.1 bits (57), Expect = 3.8
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +3
Query: 771 PXXPPPPXXXXPPPPXPPXXXPP 839
P PP P PP PP PP
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPP 1716
Score = 26.2 bits (55), Expect(2) = 0.75
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 593 TPPPPPXXKXXXPPPXPPXXPXXXXXXP 676
TPPPPP PPP P P P
Sbjct: 1706 TPPPPPM--SVPPPPSAPPMPAGPPSAP 1731
Score = 26.2 bits (55), Expect = 6.6
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +3
Query: 771 PXXPPPPXXXXPPPPXPPXXXPP 839
P PPP P P PP PP
Sbjct: 1711 PMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 21.4 bits (43), Expect(2) = 0.75
Identities = 8/20 (40%), Positives = 8/20 (40%)
Frame = +2
Query: 770 PPXPPPPXXXXPPPPXPPXP 829
PP PPP P P P
Sbjct: 1727 PPSAPPPPLPASSAPSVPNP 1746
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 31.5 bits (68), Expect = 0.18
Identities = 22/62 (35%), Positives = 24/62 (38%), Gaps = 6/62 (9%)
Frame = -1
Query: 649 GGGGGGGRXXFXXGGGG-----GGFXKKXXGXXXRX-FGGGGXXXXXXGXXGGGGGXXKX 488
G G GGR F G GG GG + G R FGGG G GG G +
Sbjct: 133 GPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGGFRG 192
Query: 487 XF 482
F
Sbjct: 193 RF 194
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = -2
Query: 834 GXGXGGXGGGGXXXXGGGGXGGF 766
G GG GG GGG GGF
Sbjct: 148 GGSRGGFGGNSRGGFGGGSRGGF 170
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -2
Query: 834 GXGXGGXGGGGXXXXGGGGXGG 769
G GG GGG GGG GG
Sbjct: 156 GNSRGGFGGGSRGGFGGGSRGG 177
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 30.7 bits (66), Expect = 0.31
Identities = 20/52 (38%), Positives = 20/52 (38%)
Frame = -1
Query: 646 GGGGGGRXXFXXGGGGGGFXKKXXGXXXRXFGGGGXXXXXXGXXGGGGGXXK 491
GG GGR F GGG GG G GG G G GG G K
Sbjct: 19 GGFNGGRGGF--GGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAK 68
Score = 29.5 bits (63), Expect = 0.71
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 2/51 (3%)
Frame = -1
Query: 646 GGGGGGRXXFXXG--GGGGGFXKKXXGXXXRXFGGGGXXXXXXGXXGGGGG 500
GG GGR F G G GGG G GG G G GG G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSG 62
Score = 28.3 bits (60), Expect = 1.6
Identities = 18/46 (39%), Positives = 18/46 (39%)
Frame = -1
Query: 646 GGGGGGRXXFXXGGGGGGFXKKXXGXXXRXFGGGGXXXXXXGXXGG 509
GG GGGR GGG GG G G GG G GG
Sbjct: 26 GGFGGGRGG-ARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.3 bits (65), Expect = 0.40
Identities = 42/201 (20%), Positives = 45/201 (22%), Gaps = 2/201 (0%)
Frame = +3
Query: 243 VPQXXPPXWGGXLGXIXXPPPXXGXXXXFP--PKFFRXXQIXPPEXGXX*TPXXFVGGPP 416
+P PP G PPP P P + P G P V PP
Sbjct: 1045 IPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPS-GIPPVPKPSVAAPP 1103
Query: 417 XXKXGAXPPPPXXKXXXXXGXKXXXFXXPPPPPXXPXXXXXXPPPPKXLXXXXXXXXXXX 596
K PP K P P P PP PK
Sbjct: 1104 VPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGA------PPVPKPSVAAPPVPAPSG 1157
Query: 597 XXXXXXXKXXRPPPPPPPXXXXXXXSPXXKKXXXPPGGXLXXFFXXAGXGGGGAXGXTPX 776
PP P P P PP + T
Sbjct: 1158 APPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAP 1217
Query: 777 XPPPPXXXXPPPPXPPXXXPP 839
P P PP P P PP
Sbjct: 1218 PVPTPSAGLPPVPVPTAKAPP 1238
Score = 26.6 bits (56), Expect = 5.0
Identities = 26/118 (22%), Positives = 27/118 (22%), Gaps = 6/118 (5%)
Frame = +2
Query: 503 PPPPXXSXXXGXXXXPPKXPXPGSXXFFXKTPPPPPXXKXXXPPPXP---PXXPXXXXXX 673
PP S P P K PP P P P P P P
Sbjct: 991 PPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTP 1050
Query: 674 PXXXKKXXPPRGXSXFXFXXRXXGGXGGXXXNPPXPPP---PXXXXPPPPXPPXPXPT 838
P P PP P P P P PP P P+
Sbjct: 1051 PVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPS 1108
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/26 (46%), Positives = 12/26 (46%), Gaps = 3/26 (11%)
Frame = +2
Query: 770 PPXPPPPXXXXPPPPX---PPXPXPT 838
PP PPP P P PP P PT
Sbjct: 1208 PPVPPPSTAPPVPTPSAGLPPVPVPT 1233
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.7 bits (61), Expect = 1.2
Identities = 22/94 (23%), Positives = 26/94 (27%)
Frame = +2
Query: 548 PPKXPXPGSXXFFXKTPPPPPXXKXXXPPPXPPXXPXXXXXXPXXXKKXXPPRGXSXFXF 727
PP P P + + P P + PPP P P P PP +
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPP-RPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPA---- 178
Query: 728 XXRXXGGXGGXXXNPPXPPPPXXXXPPPPXPPXP 829
P PP PPPP P
Sbjct: 179 --APVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
Score = 26.6 bits (56), Expect = 5.0
Identities = 18/69 (26%), Positives = 19/69 (27%), Gaps = 3/69 (4%)
Frame = +2
Query: 503 PPPPXXSXXXGXXXXPP---KXPXPGSXXFFXKTPPPPPXXKXXXPPPXPPXXPXXXXXX 673
PPP S PP P P K+PP P PP P P
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQA 209
Query: 674 PXXXKKXXP 700
P P
Sbjct: 210 PVANTSSRP 218
Score = 25.8 bits (54), Expect = 8.7
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +3
Query: 501 PPPPPXXPXXXXXXPPPP 554
PPPPP P P PP
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 822 GGXGGGGXXXXGGGGXGGF 766
GG GG G GG G GGF
Sbjct: 226 GGLGGAGLGGLGGAGLGGF 244
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 767 NPPXPPPPXXXXPPPPXPPXPXPTQN 844
N P P PPP PP P P N
Sbjct: 343 NQVMPTPQVQGSRPPPPPPMPAPIYN 368
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 27.5 bits (58), Expect = 2.8
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = -1
Query: 649 GGGGGGGRXXFXXGGGGGGFXKKXXGXXXRXFGGGG 542
GGG GGR F GG GGF + R G GG
Sbjct: 446 GGGSRGGRGGF---GGRGGFGGRGGFGGGRGRGRGG 478
>SPBC902.04 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 589
Score = 26.6 bits (56), Expect = 5.0
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 755 GXXXNPPXPPPPXXXXPPPPXPPXPXP 835
G NP PP P P PP P P
Sbjct: 161 GNLPNPAMPPIPFLPFNPAAQPPFPPP 187
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 23.8 bits (49), Expect(2) = 5.9
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 630 PPPPPPP 650
PPPPPPP
Sbjct: 238 PPPPPPP 244
Score = 20.6 bits (41), Expect(2) = 5.9
Identities = 6/11 (54%), Positives = 7/11 (63%)
Frame = +3
Query: 492 FXXPPPPPXXP 524
+ PPPPP P
Sbjct: 187 YNPPPPPPPPP 197
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 26.2 bits (55), Expect = 6.6
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 504 PPPPXXPXXXXXXPPPP 554
PPPP P PPPP
Sbjct: 139 PPPPVRPNVMSQMPPPP 155
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.2 bits (55), Expect = 6.6
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +2
Query: 734 RXXGGXGGXXXNPPXPPPPXXXXPPPPXPPXPXPT 838
R G N PPPP P PP PT
Sbjct: 1867 RWVNDDGSDLSNQAAPPPPPPMALPKAGPPSAAPT 1901
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 26.2 bits (55), Expect = 6.6
Identities = 21/71 (29%), Positives = 21/71 (29%), Gaps = 3/71 (4%)
Frame = -1
Query: 706 PGGXXFFXXXGXXXXXXXXGG---GGGGGRXXFXXGGGGGGFXKKXXGXXXRXFGGGGXX 536
PGG FF G GGGG G GG G GGG
Sbjct: 110 PGGAQFFSASDPNDIFERVFGHAFAGGGGMGGGMGGMGGMDDDMDMDGGFGTRTRGGGMP 169
Query: 535 XXXXGXXGGGG 503
GGGG
Sbjct: 170 GGFANMFGGGG 180
>SPBP8B7.16c |dbp2||ATP-dependent RNA helicase
Dbp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 550
Score = 25.8 bits (54), Expect = 8.7
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -1
Query: 649 GGGGGGGRXXFXXGGGGGGF 590
G GGG R + GGG GGF
Sbjct: 23 GRYGGGYRNNYSRGGGRGGF 42
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,617,480
Number of Sequences: 5004
Number of extensions: 50472
Number of successful extensions: 663
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 64
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 322
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 471335896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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