Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_F13
(1153 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family ... 33 0.38
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 33 0.50
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 33 0.50
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 33 0.50
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 32 0.88
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical ... 31 1.5
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.5
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.5
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.5
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 31 2.0
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 31 2.0
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 31 2.0
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 31 2.0
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 25 2.5
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 25 2.5
U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical pr... 30 2.7
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 2.7
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.2
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 6.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 6.2
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 6.2
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 29 6.2
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 8.2
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 8.2
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 8.2
>L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family
protein 1, isoform a protein.
Length = 780
Score = 33.1 bits (72), Expect = 0.38
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = -2
Query: 999 KKXXGLFXXKKNVGGGGXXK*GGGGGGXXFFXXGG 895
KK + N GGGG + GGGGGG F GG
Sbjct: 115 KKEQDNYGGGGNYGGGGGNQGGGGGGGFNFNDIGG 149
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 32.7 bits (71), Expect = 0.50
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +3
Query: 825 FXPPPRXXXLXXPXKXPXXXXFXPPPXKKKXXXXPPPPIXXXPPP 959
F PPP P P PPP PPPP+ PPP
Sbjct: 73 FIPPPPGPG-GIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPP 116
Score = 30.3 bits (65), Expect = 2.7
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = +3
Query: 825 FXPPPRXXXLXXPXKXPXXXXFXPPPXKKKXXXXPPPPIXXXPPPQHFFXXKTNP 989
F PPP P P PPP PPP + PPP F P
Sbjct: 64 FIPPPVPNGFIPPPPGPGGIP-PPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPP 117
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 32.7 bits (71), Expect = 0.50
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -2
Query: 966 NVGGGGXXK*GGGGGGXXFFXXGG 895
N GGGG + GGGGGG F GG
Sbjct: 80 NYGGGGGNQGGGGGGGFNFNDIGG 103
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 32.7 bits (71), Expect = 0.50
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -2
Query: 966 NVGGGGXXK*GGGGGGXXFFXXGG 895
N GGGG + GGGGGG F GG
Sbjct: 105 NYGGGGGNQGGGGGGGFNFNDIGG 128
Score = 29.5 bits (63), Expect = 4.7
Identities = 22/82 (26%), Positives = 25/82 (30%)
Frame = -2
Query: 1137 GXXPXAGGGXXXEGGXXPXVXGGXRPPXFFXGGEXXXXXXXXXXXPKKXXGLFXXKKNVG 958
G GGG G + GG + GG G G
Sbjct: 77 GGGSGGGGGGNNIGSLVGSLIGGGGGGGNYGGGGGNQGGGGGGGFNFNDIGGLINSMGGG 136
Query: 957 GGGXXK*GGGGGGXXFFXXGGG 892
GGG + GGGGGG G G
Sbjct: 137 GGGGQRQGGGGGGFGDILGGIG 158
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 31.9 bits (69), Expect = 0.88
Identities = 14/24 (58%), Positives = 15/24 (62%)
Frame = -2
Query: 960 GGGGXXK*GGGGGGXXFFXXGGGR 889
GGGG + GGGGGG GGGR
Sbjct: 105 GGGGGGRGGGGGGGGGRGGGGGGR 128
Score = 29.5 bits (63), Expect = 4.7
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 960 GGGGXXK*GGGGGGXXFFXXGGGR 889
G GG + GGGGGG GGGR
Sbjct: 88 GNGGGGRGGGGGGGGGRGGGGGGR 111
Score = 28.7 bits (61), Expect = 8.2
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 960 GGGGXXK*GGGGGGXXFFXXGGGR 889
GGGG + GGGGG GGGR
Sbjct: 98 GGGGGGRGGGGGGRGGGGGGGGGR 121
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 31.5 bits (68), Expect = 1.2
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = -2
Query: 972 KKNVGGGGXXK*GGGGGGXXFFXXGGG 892
K+ G GG GGGGGG F GGG
Sbjct: 469 KEFAGAGGFGSFGGGGGGGGFGGGGGG 495
Score = 29.1 bits (62), Expect = 6.2
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -2
Query: 1002 PKKXXGLFXXKKNVGGGGXXK*GGGGGGXXFFXXGGG 892
PK+ G GGGG GGGGGG F GGG
Sbjct: 468 PKEFAGAGGFGSFGGGGGGGGFGGGGGG---FGGGGG 501
>AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical
protein C02B10.5 protein.
Length = 698
Score = 31.1 bits (67), Expect = 1.5
Identities = 18/43 (41%), Positives = 18/43 (41%)
Frame = +1
Query: 769 PPXGGGFSPXPXGXXXXPGFXPPXXGXXXGAPXXXPXGXXSXP 897
PP GG F P P G PG P G AP P G S P
Sbjct: 428 PPMGGPFPPNPYG--MHPGMTP--GGYPMSAPGKMPFGSPSFP 466
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +2
Query: 1037 SPPXKKXGGRXPPXTXGXXPPSFXXPPPAXGXXP 1138
SPP + G PP PP+ PPP G P
Sbjct: 288 SPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 321
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +2
Query: 1037 SPPXKKXGGRXPPXTXGXXPPSFXXPPPAXGXXP 1138
SPP GG PP G PP PPP G P
Sbjct: 279 SPPPPPAGGSPPPPRAGSPPP----PPPPRGSPP 308
Score = 28.7 bits (61), Expect = 8.2
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +2
Query: 1037 SPPXKKXGGRXPPXTXGXXPP--SFXXPPPAXGXXP 1138
SPP + G PP T PP PPP G P
Sbjct: 263 SPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 298
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +2
Query: 1037 SPPXKKXGGRXPPXTXGXXPPSFXXPPPAXGXXP 1138
SPP + G PP PP+ PPP G P
Sbjct: 309 SPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 342
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +2
Query: 1037 SPPXKKXGGRXPPXTXGXXPPSFXXPPPAXGXXP 1138
SPP GG PP G PP PPP G P
Sbjct: 300 SPPPPPAGGSPPPPRAGSPPP----PPPPRGSPP 329
Score = 28.7 bits (61), Expect = 8.2
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +2
Query: 1037 SPPXKKXGGRXPPXTXGXXPP--SFXXPPPAXGXXP 1138
SPP + G PP T PP PPP G P
Sbjct: 284 SPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 319
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 1.5
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +2
Query: 1037 SPPXKKXGGRXPPXTXGXXPPSFXXPPPAXGXXP 1138
SPP + G PP PP+ PPP G P
Sbjct: 294 SPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSP 327
Score = 30.7 bits (66), Expect = 2.0
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +2
Query: 1037 SPPXKKXGGRXPPXTXGXXPPSFXXPPPAXGXXP 1138
SPP GG PP G PP PPP G P
Sbjct: 285 SPPPPPAGGSPPPPRAGSPPP----PPPPRGSPP 314
Score = 28.7 bits (61), Expect = 8.2
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +2
Query: 1037 SPPXKKXGGRXPPXTXGXXPP--SFXXPPPAXGXXP 1138
SPP + G PP T PP PPP G P
Sbjct: 269 SPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 304
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 861 PXKXPXXXXFXPPPXKKKXXXXPPPPIXXXPPP 959
P P PPP PPPPI PPP
Sbjct: 44 PMPMPMPMPVCPPPPPCPAQFCPPPPICPPPPP 76
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -2
Query: 960 GGGGXXK*GGGGGGXXFFXXGGG 892
GGGG GGGGGG + GGG
Sbjct: 249 GGGGGRGYGGGGGGGGYGYGGGG 271
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/23 (56%), Positives = 14/23 (60%)
Frame = -2
Query: 960 GGGGXXK*GGGGGGXXFFXXGGG 892
GGGG GGGGGG + GGG
Sbjct: 250 GGGGRGYGGGGGGGGYGYGGGGG 272
Score = 29.5 bits (63), Expect = 4.7
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -2
Query: 960 GGGGXXK*GGGGGGXXFFXXGGGR 889
GGG GGGGGG + GGGR
Sbjct: 251 GGGRGYGGGGGGGGYGYGGGGGGR 274
Score = 28.7 bits (61), Expect = 8.2
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 960 GGGGXXK*GGGGGGXXFFXXGGG 892
GGGG + GGGGG + GGG
Sbjct: 248 GGGGGGRGYGGGGGGGGYGYGGG 270
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 30.7 bits (66), Expect = 2.0
Identities = 18/55 (32%), Positives = 20/55 (36%)
Frame = +3
Query: 825 FXPPPRXXXLXXPXKXPXXXXFXPPPXKKKXXXXPPPPIXXXPPPQHFFXXKTNP 989
F PPP + P F PPP P PP PPP HF + P
Sbjct: 320 FMPPPPHFGMGPPR------GFMPPPHPMMFRGGPYPPFF-PPPPPHFMRPSSPP 367
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 30.7 bits (66), Expect = 2.0
Identities = 18/55 (32%), Positives = 20/55 (36%)
Frame = +3
Query: 825 FXPPPRXXXLXXPXKXPXXXXFXPPPXKKKXXXXPPPPIXXXPPPQHFFXXKTNP 989
F PPP + P F PPP P PP PPP HF + P
Sbjct: 320 FMPPPPHFGMGPPR------GFMPPPHPMMFRGGPYPPFF-PPPPPHFMRPSSPP 367
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 25.0 bits (52), Expect(2) = 2.5
Identities = 17/58 (29%), Positives = 20/58 (34%)
Frame = +3
Query: 540 TPXXTPXXXXKKSPXXFXXXXXXXPXFTPGGXVLEFXXKFQPXPXLYXFGPPXLGRAP 713
TP TP S + P TPG + P P FGPP +G P
Sbjct: 290 TPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMP---GMPPPPPPSRFGPPGMGGMP 344
Score = 23.8 bits (49), Expect(2) = 2.5
Identities = 11/36 (30%), Positives = 11/36 (30%)
Frame = +3
Query: 831 PPPRXXXLXXPXKXPXXXXFXPPPXKKKXXXXPPPP 938
PPP P P PP PPPP
Sbjct: 360 PPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 395
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 25.0 bits (52), Expect(2) = 2.5
Identities = 17/58 (29%), Positives = 20/58 (34%)
Frame = +3
Query: 540 TPXXTPXXXXKKSPXXFXXXXXXXPXFTPGGXVLEFXXKFQPXPXLYXFGPPXLGRAP 713
TP TP S + P TPG + P P FGPP +G P
Sbjct: 280 TPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMP---GMPPPPPPSRFGPPGMGGMP 334
Score = 23.8 bits (49), Expect(2) = 2.5
Identities = 11/36 (30%), Positives = 11/36 (30%)
Frame = +3
Query: 831 PPPRXXXLXXPXKXPXXXXFXPPPXKKKXXXXPPPP 938
PPP P P PP PPPP
Sbjct: 350 PPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPP 385
>U97015-9|AAB52349.1| 343|Caenorhabditis elegans Hypothetical
protein F48C1.8 protein.
Length = 343
Score = 30.3 bits (65), Expect = 2.7
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -2
Query: 960 GGGGXXK*GGGGGGXXFFXXGGG 892
GGGG GGGGGG GGG
Sbjct: 181 GGGGSHHHGGGGGGGGHHHHGGG 203
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.3 bits (65), Expect = 2.7
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Frame = +3
Query: 831 PPPRXXXLXXPXKXPXXXX--FXPPPXKKKXXXXPPPPIXXXPPP 959
PPP P P F PPP PPPP PPP
Sbjct: 34 PPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPP 78
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 29.1 bits (62), Expect = 6.2
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +3
Query: 831 PPPRXXXLXXPXKXPXXXXFXPPPXKKKXXXXPPPPIXXXPPPQ 962
PP + P P PP PPPP PPPQ
Sbjct: 328 PPMKLDPSPQPAATPVEITEIPPIISPPAPPPPPPPPPPPPPPQ 371
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical protein
C18D11.4 protein.
Length = 309
Score = 29.1 bits (62), Expect = 6.2
Identities = 24/78 (30%), Positives = 29/78 (37%)
Frame = -2
Query: 1152 GXKKXGXXPXAGGGXXXEGGXXPXVXGGXRPPXFFXGGEXXXXXXXXXXXPKKXXGLFXX 973
G + G GGG GG GG R GG+ P + G
Sbjct: 195 GGDRYGGDRRGGGGGG--GGDRYGGGGGDR-----YGGDRYGGGGGRRGSPDRRGGF--- 244
Query: 972 KKNVGGGGXXK*GGGGGG 919
+ GGGG + GGGGGG
Sbjct: 245 RSGGGGGGYMRSGGGGGG 262
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 29.1 bits (62), Expect = 6.2
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -2
Query: 960 GGGGXXK*GGGGGGXXFFXXGGG 892
GGGG GGGGGG GGG
Sbjct: 89 GGGGYGAGGGGGGGGGEAAGGGG 111
Score = 28.7 bits (61), Expect = 8.2
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -2
Query: 960 GGGGXXK*GGGGGGXXFFXXGGGRXXT 880
GGGG GGGGGG GGG T
Sbjct: 88 GGGGGYGAGGGGGGGGGEAAGGGGGCT 114
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 6.2
Identities = 21/73 (28%), Positives = 22/73 (30%)
Frame = -2
Query: 1137 GXXPXAGGGXXXEGGXXPXVXGGXRPPXFFXGGEXXXXXXXXXXXPKKXXGLFXXKKNVG 958
G GGG GG GG GG G + G
Sbjct: 208 GGGGCGGGGSSGGGGYASAPSGGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGGGYSTG 267
Query: 957 GGGXXK*GGGGGG 919
GGG GGGGGG
Sbjct: 268 GGGGYAGGGGGGG 280
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 6.2
Identities = 21/73 (28%), Positives = 22/73 (30%)
Frame = -2
Query: 1137 GXXPXAGGGXXXEGGXXPXVXGGXRPPXFFXGGEXXXXXXXXXXXPKKXXGLFXXKKNVG 958
G GGG GG GG GG G + G
Sbjct: 208 GGGGCGGGGSSGGGGYASAPSGGGGYATSGGGGSGGYATGGSSGGGYSSGGSSGGGYSTG 267
Query: 957 GGGXXK*GGGGGG 919
GGG GGGGGG
Sbjct: 268 GGGGYAGGGGGGG 280
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 6.2
Identities = 13/42 (30%), Positives = 15/42 (35%)
Frame = +3
Query: 831 PPPRXXXLXXPXKXPXXXXFXPPPXKKKXXXXPPPPIXXXPP 956
PPPR + P P P + PP PI PP
Sbjct: 155 PPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPP 196
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.1 bits (62), Expect = 6.2
Identities = 16/46 (34%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Frame = +1
Query: 769 PPXGGGFSPXPXGXXXXPG-FXPPXXG-XXXGAPXXXPXGXXSXPP 900
P GG+ P P G PG + PP G G P G PP
Sbjct: 403 PGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPP 448
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 29.1 bits (62), Expect = 6.2
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +2
Query: 1040 PPXKKXGGRXPPXTXGXXPPSFXXPPPAXGXXPFFXXP 1153
PP G PP PP F PPPA P F P
Sbjct: 24 PPCFGIGCNQPPIVIAGPPPCFDCPPPA----PIFVAP 57
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 28.7 bits (61), Expect = 8.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -2
Query: 960 GGGGXXK*GGGGGGXXFFXXGGG 892
GGGG GGGGGG + G G
Sbjct: 119 GGGGGCGGGGGGGGGGYASGGSG 141
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical protein
C33B4.3b protein.
Length = 993
Score = 28.7 bits (61), Expect = 8.2
Identities = 17/56 (30%), Positives = 21/56 (37%)
Frame = +3
Query: 894 PPPXKKKXXXXPPPPIXXXPPPQHFFXXKTNPXFFLXXTXXXXXXXXXLPPXKXGA 1061
P P +++ PPPP PPP H + F T LPP GA
Sbjct: 754 PQPIQQQQSSIPPPPP--PPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGA 807
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical protein
C33B4.3a protein.
Length = 1110
Score = 28.7 bits (61), Expect = 8.2
Identities = 17/56 (30%), Positives = 21/56 (37%)
Frame = +3
Query: 894 PPPXKKKXXXXPPPPIXXXPPPQHFFXXKTNPXFFLXXTXXXXXXXXXLPPXKXGA 1061
P P +++ PPPP PPP H + F T LPP GA
Sbjct: 754 PQPIQQQQSSIPPPPP--PPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGA 807
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,365,507
Number of Sequences: 27780
Number of extensions: 242689
Number of successful extensions: 1990
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1430
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3130337400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -