Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_F10
         (888 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    23   3.2  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    22   7.4  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.8  

>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 13/52 (25%), Positives = 23/52 (44%)
 Frame = +3

Query: 378 SLNDLRSYLNSIRHFYIYYVTLCYVVPRLY**YLTYHSHCLSQSDRVHILLY 533
           SL +L+     I+     Y ++ ++   L    +TY  H L     VH+ +Y
Sbjct: 40  SLQELKYMERCIKEVLRLYPSVPFIARSLGEDIVTYSGHKLKAGSMVHLHIY 91


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 16/57 (28%), Positives = 17/57 (29%), Gaps = 4/57 (7%)
 Frame = +1

Query: 691 PXXPXXPXPPXXXXXXXXPGGXLSPXX----GGXXXPPPXXNTPXXAXXXPXPPXTP 849
           P  P    P         P G  SP      G      P  NTP  +   P PP  P
Sbjct: 22  PQSPLDMKPDASTLGQFSPQGPNSPVSFSMGGHGSLLSPSGNTPNKSSTSPYPPNHP 78


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +2

Query: 410 HKAFLYLLCHIMLCGSSIILVIFDI 484
           HK F+     ++ C  +I L+ FDI
Sbjct: 7   HKKFINTTKLLLWCDQTIGLITFDI 31


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,109
Number of Sequences: 336
Number of extensions: 3760
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24617054
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)