Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_F10
         (888 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF525673-1|AAM82611.1|   60|Anopheles gambiae cecropin CecB prot...    35   0.003
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.3  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    26   1.8  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    25   4.1  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    25   4.1  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    25   4.1  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   5.4  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   5.4  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    23   9.4  

>AF525673-1|AAM82611.1|   60|Anopheles gambiae cecropin CecB
           protein.
          Length = 60

 Score = 35.1 bits (77), Expect = 0.003
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = +3

Query: 195 PRWKLFKKIEKVGRNVRDGLIKAGPAIA 278
           PRWK  K++EK+GRNV     KA P IA
Sbjct: 27  PRWKFGKRLEKLGRNVFRAAKKALPVIA 54


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 14/35 (40%), Positives = 14/35 (40%)
 Frame = +1

Query: 661 PPXPPPPPXPPXXPXXPXPPXXXXXXXXPGGXLSP 765
           PP  PPPP PP  P  P  P        P G   P
Sbjct: 581 PPPAPPPP-PPMGP--PPSPLAGGPLGGPAGSRPP 612



 Score = 25.4 bits (53), Expect = 2.3
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +2

Query: 662 PXXXPPPXXPXPXPXXXPP 718
           P   PPP  P P P   PP
Sbjct: 577 PNAQPPPAPPPPPPMGPPP 595



 Score = 25.0 bits (52), Expect = 3.1
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +1

Query: 664 PXPPPPPXPPXXPXXPXPP 720
           P   PPP PP  P    PP
Sbjct: 577 PNAQPPPAPPPPPPMGPPP 595



 Score = 24.6 bits (51), Expect = 4.1
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +1

Query: 664 PXPPPPPXPPXXPXXPXPP 720
           P  PPPP PP       PP
Sbjct: 527 PLGPPPPPPPGGAVLNIPP 545


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 25.8 bits (54), Expect = 1.8
 Identities = 15/44 (34%), Positives = 15/44 (34%)
 Frame = +1

Query: 661 PPXPPPPPXPPXXPXXPXPPXXXXXXXXPGGXLSPXXGGXXXPP 792
           PP    PP P   P  P  P        P G L P   G   PP
Sbjct: 80  PPTMNMPPRPGMIPGMPGAPPLLMG---PNGPLPPPMMGMRPPP 120


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 4/56 (7%)
 Frame = -3

Query: 805 CXXXGGGXXPXXKXGRXXPPGXXXXXXGXGGXXXXXXX----GXXGGGXXXGGGXG 650
           C   GGG       G     G      G GG           G  GGG   GGG G
Sbjct: 811 CGGNGGGGGAGASGGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAGGGSSGGGGSG 866



 Score = 24.6 bits (51), Expect = 4.1
 Identities = 14/44 (31%), Positives = 14/44 (31%)
 Frame = -2

Query: 794 GGGXXXPPXXGEXXPPGXXXXXXXXGGXGXXGXXGGXGGGGGXG 663
           GGG       G     G        GG G  G   G  GG G G
Sbjct: 815 GGGGGAGASGGGFLITGDPSDTIGAGGGGAGGPLRGSSGGAGGG 858


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 12/35 (34%), Positives = 13/35 (37%)
 Frame = -2

Query: 764 GEXXPPGXXXXXXXXGGXGXXGXXGGXGGGGGXGG 660
           G+  P G        G  G  G  G  GGG G  G
Sbjct: 377 GQSGPKGEPGRDGIPGQPGIAGPAGAPGGGEGRPG 411


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 12/31 (38%), Positives = 13/31 (41%)
 Frame = -2

Query: 719  GGXGXXGXXGGXGGGGGXGGXXXXXXXXXWK 627
            GG G     G  GGGGG GG         W+
Sbjct: 1484 GGYGGSPTKGA-GGGGGGGGGKGAAGRSNWR 1513


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +1

Query: 661 PPXPPPPPXPPXXP 702
           PP PPPPP     P
Sbjct: 783 PPPPPPPPPSSLSP 796



 Score = 24.2 bits (50), Expect = 5.4
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = +1

Query: 670 PPPPPXPPXXPXXP 711
           PPPPP PP     P
Sbjct: 783 PPPPPPPPPSSLSP 796



 Score = 24.2 bits (50), Expect = 5.4
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +1

Query: 661 PPXPPPPPXPPXXPXXPXP 717
           PP PPPPP        P P
Sbjct: 784 PPPPPPPPSSLSPGGVPRP 802


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 17/76 (22%), Positives = 17/76 (22%)
 Frame = +1

Query: 661 PPXPPPPPXPPXXPXXPXPPXXXXXXXXPGGXLSPXXGGXXXPPPXXNTPXXAXXXPXPP 840
           P  P PP      P  P  P        PG       G    PP              PP
Sbjct: 206 PTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPP 265

Query: 841 XTPXXXXXRXLPPXXP 888
             P        P   P
Sbjct: 266 IRPPNPMGGPRPQISP 281



 Score = 23.8 bits (49), Expect = 7.1
 Identities = 13/41 (31%), Positives = 13/41 (31%)
 Frame = +1

Query: 673 PPPPXPPXXPXXPXPPXXXXXXXXPGGXLSPXXGGXXXPPP 795
           PPP  PP     P P          GG  S   G    P P
Sbjct: 263 PPPIRPPNPMGGPRPQISPQNSNLSGGMPSGMVGPPRPPMP 303


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 10/37 (27%), Positives = 19/37 (51%)
 Frame = -2

Query: 227 FLNFLEEFPPGLRSSADRAESQHQREDEAQNTYEIHF 117
           F + + + P G+R + +R E + QR   A     +H+
Sbjct: 304 FDSIITDPPYGIREATERIEFKTQRRATAMTEDAVHY 340


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 743,166
Number of Sequences: 2352
Number of extensions: 14115
Number of successful extensions: 88
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 72
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95507181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)