Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_F09
(896 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.008
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.096
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 32 0.13
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.17
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 30 0.51
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 1.2
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 23 4.4
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 8.4
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.9 bits (79), Expect = 0.008
Identities = 18/42 (42%), Positives = 18/42 (42%)
Frame = +2
Query: 449 PPPPPXGXGXFXFPPPXPPPXKXNPPPXXFXXGGPRXXXPPP 574
PPPPP G PP PP PPP GG R P P
Sbjct: 761 PPPPPPPPGVAGAGPPPPP-----PPPPAVSAGGSRYYAPAP 797
Score = 33.9 bits (74), Expect = 0.032
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = +2
Query: 443 KXPPPPPXGXGXFXFPPPXPPPXKXNPPPXXFXXGGPRXXXPPPXGGXXXXP 598
K PPPPP P P P P PPP G P PP G P
Sbjct: 730 KSPPPPPPAV---IVPTPAPAPIPV-PPPAPIMGGPPPPPPPPGVAGAGPPP 777
Score = 33.5 bits (73), Expect = 0.042
Identities = 14/41 (34%), Positives = 17/41 (41%)
Frame = +2
Query: 449 PPPPPXGXGXFXFPPPXPPPXKXNPPPXXFXXGGPRXXXPP 571
PPPPP G PPP PPP + + P+ P
Sbjct: 763 PPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEP 803
Score = 30.3 bits (65), Expect = 0.39
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +1
Query: 748 PPPPXXXGPPPPPP 789
PP P GPPPPPP
Sbjct: 753 PPAPIMGGPPPPPP 766
Score = 28.3 bits (60), Expect = 1.6
Identities = 11/16 (68%), Positives = 11/16 (68%), Gaps = 2/16 (12%)
Frame = +1
Query: 748 PPPPXX--XGPPPPPP 789
PPPP GPPPPPP
Sbjct: 765 PPPPGVAGAGPPPPPP 780
Score = 26.6 bits (56), Expect = 4.8
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 748 PPPPXXXGPPPPPP 789
PPP G PPPPP
Sbjct: 752 PPPAPIMGGPPPPP 765
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.3 bits (70), Expect = 0.096
Identities = 29/120 (24%), Positives = 32/120 (26%), Gaps = 4/120 (3%)
Frame = +3
Query: 438 PXKXPPPPPXEXGXXLFPPPXPXPXXQTPRRXXFXGG----ARXXXXPPHXXGXXXPPXX 605
P PP P G PPP P P + P G A P PP
Sbjct: 1046 PTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVP 1105
Query: 606 RGXTAXKKXFPPTRXPXXXPXPKXRXPXGAXXXTHXXXXXXXXXXXXPPPPXXXGXPPPP 785
+ A P+ P P PK PP P G PP P
Sbjct: 1106 KPSVAVPPVPAPSGAP---PVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP 1162
Score = 26.6 bits (56), Expect = 4.8
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +3
Query: 438 PXKXPPPPPXEXGXXLFPPPXPXPXXQTP 524
P + PP P G PPP P TP
Sbjct: 1194 PSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 25.8 bits (54), Expect = 8.4
Identities = 22/78 (28%), Positives = 23/78 (29%), Gaps = 6/78 (7%)
Frame = +1
Query: 589 PXPPXXGGXPPXKKXF----PPPAXQXXXPP-PKXGXLXGXXXXHTXXXXXXXXXXXXPP 753
P P G PP K P PA PP PK + PP
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 754 -PPXXXGPPPPPPXXXTP 804
PP PP P P P
Sbjct: 1210 VPPPSTAPPVPTPSAGLP 1227
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.9 bits (69), Expect = 0.13
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +2
Query: 449 PPPPPXGXGXFXFPPPXPPP 508
PPPPP G PPP PPP
Sbjct: 11 PPPPPPGFEPPSQPPPPPPP 30
Score = 29.1 bits (62), Expect = 0.90
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +2
Query: 437 PXKXPPPPPXGXGXFXFPPPXPPPXKXNPPP 529
P PPPPP G F PP PP PPP
Sbjct: 5 PPGNPPPPPPPPG---FEPPSQPPPP--PPP 30
Score = 26.2 bits (55), Expect = 6.3
Identities = 11/31 (35%), Positives = 12/31 (38%)
Frame = +3
Query: 438 PXKXPPPPPXEXGXXLFPPPXPXPXXQTPRR 530
P PPPPP PP P P +R
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPPGYVKKR 36
Score = 25.8 bits (54), Expect = 8.4
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1
Query: 754 PPXXXGPPPPPPXXXTP 804
PP PPPPPP P
Sbjct: 5 PPGNPPPPPPPPGFEPP 21
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.5 bits (68), Expect = 0.17
Identities = 16/31 (51%), Positives = 17/31 (54%)
Frame = -3
Query: 528 GGGFXXWGGGXGGGKXKXPXPXGGGGGXFXG 436
GGGF +GGG GG P P GG G F G
Sbjct: 187 GGGFGGFGGGSGG-----PPPGPGGFGGFGG 212
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 5/51 (9%)
Frame = -3
Query: 573 GGGXXXRGPPXXXXXGGGFXXWGG-----GXGGGKXKXPXPXGGGGGXFXG 436
G G GPP GGF +GG G GG P GG G F G
Sbjct: 192 GFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGG 242
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -3
Query: 573 GGGXXXRGPPXXXXXGGGFXXWGGGXGGGKXKXPXPXGGGGG 448
G G GP GGF GG GGG GG GG
Sbjct: 222 GHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGG 263
Score = 27.9 bits (59), Expect = 2.1
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -3
Query: 573 GGGXXXRGPPXXXXXGGGFXXWGGGXGGGKXKXPXPXGGGGG 448
G G GP GGF GG GGG GG GG
Sbjct: 229 GPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -3
Query: 525 GGFXXWGGGXGGGKXKXPXPXGGGGGXFXG 436
GGF GG GGG P GGG G F G
Sbjct: 231 GGFEGGPGGFGGG----PGGFGGGLGGFGG 256
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 29.9 bits (64), Expect = 0.51
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = +2
Query: 449 PPPPPXGXGXFXFPPPXPPPXKXNPPPXXFXXGGPRXXXPPP 574
PPPPP P PP + PPP PPP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +2
Query: 488 PPPXPPPXKXNPPPXXFXXGGPRXXXPPP 574
PPP PPP + N G PPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPP 339
Score = 27.9 bits (59), Expect = 2.1
Identities = 19/68 (27%), Positives = 20/68 (29%), Gaps = 11/68 (16%)
Frame = +2
Query: 404 PXRGGGGXXFXPXKXPPPPPXGXGXFXFPP-----PXPPPXK------XNPPPXXFXXGG 550
P G P PPP G PP P PPP + PPP
Sbjct: 326 PIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAV 385
Query: 551 PRXXXPPP 574
PPP
Sbjct: 386 SNPPAPPP 393
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/56 (25%), Positives = 16/56 (28%)
Frame = +1
Query: 637 PPPAXQXXXPPPKXGXLXGXXXXHTXXXXXXXXXXXXPPPPXXXGPPPPPPXXXTP 804
PPP+ + PP P PP PPPPP P
Sbjct: 315 PPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +2
Query: 452 PPPPXGXGXFXFPPPXPPPXKXNPPPXXFXXGGPRXXXPPP 574
PP G PPP PPP G PPP
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPP 365
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 28.7 bits (61), Expect = 1.2
Identities = 17/56 (30%), Positives = 18/56 (32%), Gaps = 3/56 (5%)
Frame = +2
Query: 416 GGGXXFXPXKXPPPPPXGXGXFXFPPPXPPPXKXNPPPXXF---XXGGPRXXXPPP 574
GG P PP P P PPP + PP GP PPP
Sbjct: 1679 GGMAPAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 23.0 bits (47), Expect(2) = 2.6
Identities = 11/18 (61%), Positives = 11/18 (61%), Gaps = 4/18 (22%)
Frame = +1
Query: 748 PP--PPXXXGPP--PPPP 789
PP PP GPP PPPP
Sbjct: 1717 PPSAPPMPAGPPSAPPPP 1734
Score = 22.6 bits (46), Expect(2) = 2.6
Identities = 9/28 (32%), Positives = 9/28 (32%)
Frame = +1
Query: 589 PXPPXXGGXPPXKKXFPPPAXQXXXPPP 672
P P P PPP PPP
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPP 1718
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 22.6 bits (46), Expect(2) = 4.4
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +1
Query: 751 PPPXXXGPPPPPP 789
PPP PPPPPP
Sbjct: 189 PPP----PPPPPP 197
Score = 22.2 bits (45), Expect(2) = 4.4
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 772 PPPPPPXXXTP 804
PPPPPP P
Sbjct: 238 PPPPPPPTLPP 248
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 25.8 bits (54), Expect = 8.4
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = +2
Query: 437 PXKXPPPPPX--GXGXFXFPPP-XPPPXKXNPPPXXFXXGGPRXXXPP 571
P + PPPP G PPP P + PPP G PP
Sbjct: 203 PGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 25.8 bits (54), Expect = 8.4
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = +2
Query: 437 PXKXPPPPPX--GXGXFXFPPP-XPPPXKXNPPPXXFXXGGPRXXXPP 571
P + PPPP G PPP P + PPP G PP
Sbjct: 216 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 25.8 bits (54), Expect = 8.4
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = +2
Query: 437 PXKXPPPPPX--GXGXFXFPPP-XPPPXKXNPPPXXFXXGGPRXXXPP 571
P + PPPP G PPP P + PPP G PP
Sbjct: 229 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 25.8 bits (54), Expect = 8.4
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = +2
Query: 437 PXKXPPPPPX--GXGXFXFPPP-XPPPXKXNPPPXXFXXGGPRXXXPP 571
P + PPPP G PPP P + PPP G PP
Sbjct: 242 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 25.8 bits (54), Expect = 8.4
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = +2
Query: 437 PXKXPPPPPX--GXGXFXFPPP-XPPPXKXNPPPXXFXXGGPRXXXPP 571
P + PPPP G PPP P + PPP G PP
Sbjct: 255 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 25.8 bits (54), Expect = 8.4
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = +2
Query: 437 PXKXPPPPPX--GXGXFXFPPP-XPPPXKXNPPPXXFXXGGPRXXXPP 571
P + PPPP G PPP P + PPP G PP
Sbjct: 268 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 25.8 bits (54), Expect = 8.4
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = +2
Query: 437 PXKXPPPPPX--GXGXFXFPPP-XPPPXKXNPPPXXFXXGGPRXXXPP 571
P + PPPP G PPP P + PPP G PP
Sbjct: 281 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 25.8 bits (54), Expect = 8.4
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = +2
Query: 437 PXKXPPPPPX--GXGXFXFPPP-XPPPXKXNPPPXXFXXGGPRXXXPP 571
P + PPPP G PPP P + PPP G PP
Sbjct: 294 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,687,199
Number of Sequences: 5004
Number of extensions: 27718
Number of successful extensions: 292
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 181
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 452494940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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