Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_F08
(913 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 38 0.013
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.040
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.040
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.040
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 35 0.093
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 35 0.093
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 33 0.37
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.65
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.65
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 0.86
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 0.86
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 0.86
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 30 2.6
AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like ... 30 2.6
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 29 3.5
Z68106-4|CAA92128.1| 112|Caenorhabditis elegans Hypothetical pr... 29 4.6
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 4.6
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 29 6.1
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 29 6.1
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 29 6.1
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 29 6.1
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 6.1
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 28 8.1
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 28 8.1
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 37.5 bits (83), Expect = 0.013
Identities = 30/94 (31%), Positives = 30/94 (31%), Gaps = 1/94 (1%)
Frame = -1
Query: 673 GGGXVGXGXXXXGGCPGGGGXXXVVAPLXGXXEXXXXXGXXAXGXXGFXGGRENGXXGXX 494
GGG G G GGC GGGG AP G G G GG G G
Sbjct: 28 GGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGG-GGGGCGGGGGCG 86
Query: 493 XXKXALXPXGGG-GXXX*FXKKTXPXPFPPRXPG 395
GGG G P P PP G
Sbjct: 87 GGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGG 120
Score = 33.1 bits (72), Expect = 0.28
Identities = 25/73 (34%), Positives = 25/73 (34%)
Frame = -1
Query: 673 GGGXVGXGXXXXGGCPGGGGXXXVVAPLXGXXEXXXXXGXXAXGXXGFXGGRENGXXGXX 494
GGG G G GGC GGGG AP G G G GG G G
Sbjct: 88 GGGGCGGGG---GGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGCGGGGGGGCGGG 144
Query: 493 XXKXALXPXGGGG 455
GGGG
Sbjct: 145 GGGGC---GGGGG 154
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1
Query: 673 GGGXVGXGXXXXGGCPGGGG 614
GGG G G GGC GGGG
Sbjct: 164 GGGGGGCGGGGGGGCGGGGG 183
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = -3
Query: 749 GGGGRXXXXXXXXXXXXXXXXXXAXGGGXCGXRGXXXGXVPRGGXEXXGGGPPXGGXXGX 570
GGGG GGG CG G G GG GGG GG G
Sbjct: 43 GGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGG---GGGCGGGGGGCGGGGGGC 99
Query: 569 G 567
G
Sbjct: 100 G 100
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -3
Query: 674 GGGXCGXRGXXXGXVPRGGXEXXGGGPPXGGXXGXG 567
GGG CG G G GG GGG GG G G
Sbjct: 145 GGGGCGGGGGGCGG---GGGGCGGGGGGCGGGGGGG 177
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = -3
Query: 674 GGGXCGXRGXXXGXVPRGGXEXXGGGPPXGGXXGXGXXRXRXXR 543
GGG CG G G G GGG GG G G R R
Sbjct: 152 GGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGGCGGGCGRKKR 195
Score = 29.1 bits (62), Expect = 4.6
Identities = 23/74 (31%), Positives = 23/74 (31%), Gaps = 2/74 (2%)
Frame = -1
Query: 670 GGXVGXGXXXXGGCPGGGGXXXVVAPLXG--XXEXXXXXGXXAXGXXGFXGGRENGXXGX 497
GG G G GGC GGGG G G G G GG G G
Sbjct: 23 GGGGGGGGGCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGGGGGCGGGGGGCGGG 82
Query: 496 XXXKXALXPXGGGG 455
GGGG
Sbjct: 83 GGCGGGGGGCGGGG 96
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -3
Query: 674 GGGXCGXRGXXXGXVPRGGXEXXGGGPPXGGXXGXG 567
GGG CG G G GG GGG GG G G
Sbjct: 75 GGGGCGGGGGCGGG--GGGCGGGGGGCGGGGGCGGG 108
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.9 bits (79), Expect = 0.040
Identities = 22/62 (35%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Frame = +1
Query: 568 PXPXLPPX-GGPPPXXSXPPRGTXPXXXPLXPHXPPPXAXXXXXXXXXXXXXXXXXXRPP 744
P P LPP GGPPP PP G P P PPP PP
Sbjct: 715 PPPGLPPITGGPPP---PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 745 PP 750
PP
Sbjct: 772 PP 773
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +1
Query: 568 PXPXLPPXGGPPPXXSXPPRGTXPXXXPLXPHXPPP 675
P P PP G PP PP P P P PPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 32.3 bits (70), Expect = 0.49
Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 4/65 (6%)
Frame = +1
Query: 568 PXPXLPPXGGPP----PXXSXPPRGTXPXXXPLXPHXPPPXAXXXXXXXXXXXXXXXXXX 735
P P PP G PP P PP G P P PPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Query: 736 RPPPP 750
PPPP
Sbjct: 786 PPPPP 790
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Frame = +1
Query: 580 LPPX-GGPPPXXSXPPRGTXPXXXPLXPHXPPPXAXXXXXXXXXXXXXXXXXXRPPPP 750
LPP GGPPP PP P P P PP PPPP
Sbjct: 706 LPPITGGPPPPPGLPPITGGPPPPP-PPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.9 bits (79), Expect = 0.040
Identities = 22/62 (35%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Frame = +1
Query: 568 PXPXLPPX-GGPPPXXSXPPRGTXPXXXPLXPHXPPPXAXXXXXXXXXXXXXXXXXXRPP 744
P P LPP GGPPP PP G P P PPP PP
Sbjct: 715 PPPGLPPITGGPPP---PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Query: 745 PP 750
PP
Sbjct: 772 PP 773
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +1
Query: 568 PXPXLPPXGGPPPXXSXPPRGTXPXXXPLXPHXPPP 675
P P PP G PP PP P P P PPP
Sbjct: 742 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 32.3 bits (70), Expect = 0.49
Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 4/65 (6%)
Frame = +1
Query: 568 PXPXLPPXGGPP----PXXSXPPRGTXPXXXPLXPHXPPPXAXXXXXXXXXXXXXXXXXX 735
P P PP G PP P PP G P P PPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Query: 736 RPPPP 750
PPPP
Sbjct: 786 PPPPP 790
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Frame = +1
Query: 580 LPPX-GGPPPXXSXPPRGTXPXXXPLXPHXPPPXAXXXXXXXXXXXXXXXXXXRPPPP 750
LPP GGPPP PP P P P PP PPPP
Sbjct: 706 LPPITGGPPPPPGLPPITGGPPPPP-PPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.9 bits (79), Expect = 0.040
Identities = 22/62 (35%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Frame = +1
Query: 568 PXPXLPPX-GGPPPXXSXPPRGTXPXXXPLXPHXPPPXAXXXXXXXXXXXXXXXXXXRPP 744
P P LPP GGPPP PP G P P PPP PP
Sbjct: 298 PPPGLPPITGGPPP---PPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
Query: 745 PP 750
PP
Sbjct: 355 PP 356
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +1
Query: 568 PXPXLPPXGGPPPXXSXPPRGTXPXXXPLXPHXPPP 675
P P PP G PP PP P P P PPP
Sbjct: 325 PPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
Score = 32.3 bits (70), Expect = 0.49
Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 4/65 (6%)
Frame = +1
Query: 568 PXPXLPPXGGPP----PXXSXPPRGTXPXXXPLXPHXPPPXAXXXXXXXXXXXXXXXXXX 735
P P PP G PP P PP G P P PPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Query: 736 RPPPP 750
PPPP
Sbjct: 369 PPPPP 373
Score = 29.5 bits (63), Expect = 3.5
Identities = 19/58 (32%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Frame = +1
Query: 580 LPPX-GGPPPXXSXPPRGTXPXXXPLXPHXPPPXAXXXXXXXXXXXXXXXXXXRPPPP 750
LPP GGPPP PP P P P PP PPPP
Sbjct: 289 LPPITGGPPPPPGLPPITGGPPPPP-PPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 345
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 34.7 bits (76), Expect = 0.093
Identities = 28/80 (35%), Positives = 30/80 (37%), Gaps = 7/80 (8%)
Frame = -1
Query: 673 GGGXVGXGXXXXGGCPGG--GGXXXVVAPLXGXXEXXXXXGXXAXGXXGFX-----GGRE 515
GGG G G GGC GG GG VAP G G + G G+ GG
Sbjct: 157 GGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGG----CGGGGSSGGGGYAVAPSGGGGC 212
Query: 514 NGXXGXXXXKXALXPXGGGG 455
G A P GGGG
Sbjct: 213 GGGGSSGGGGYASAPSGGGG 232
Score = 33.9 bits (74), Expect = 0.16
Identities = 24/73 (32%), Positives = 25/73 (34%)
Frame = -1
Query: 673 GGGXVGXGXXXXGGCPGGGGXXXVVAPLXGXXEXXXXXGXXAXGXXGFXGGRENGXXGXX 494
GG G G GGC GGGG G G A G GG G
Sbjct: 141 GGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSG--GGGCGGGGSSG 198
Query: 493 XXKXALXPXGGGG 455
A+ P GGGG
Sbjct: 199 GGGYAVAPSGGGG 211
Score = 33.5 bits (73), Expect = 0.21
Identities = 24/72 (33%), Positives = 24/72 (33%)
Frame = -1
Query: 673 GGGXVGXGXXXXGGCPGGGGXXXVVAPLXGXXEXXXXXGXXAXGXXGFXGGRENGXXGXX 494
GGG G G GGC GGGG AP G G G GG G G
Sbjct: 56 GGGCGGGG----GGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCG 111
Query: 493 XXKXALXPXGGG 458
GGG
Sbjct: 112 GGGGGCGGGGGG 123
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -1
Query: 673 GGGXVGXGXXXXGGCPGGGGXXXVVAPLXG 584
GGG G G GGC GGGG AP G
Sbjct: 28 GGGGGGCGGGCGGGCGGGGGCAPPPAPCGG 57
Score = 31.5 bits (68), Expect = 0.86
Identities = 24/73 (32%), Positives = 26/73 (35%)
Frame = -1
Query: 673 GGGXVGXGXXXXGGCPGGGGXXXVVAPLXGXXEXXXXXGXXAXGXXGFXGGRENGXXGXX 494
GGG G G GG GGGG + G G G G GG G
Sbjct: 120 GGGGCGGGGGGCGG-GGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGG-GGGGGCGGGSSG 177
Query: 493 XXKXALXPXGGGG 455
A+ P GGGG
Sbjct: 178 GGGYAVAPSGGGG 190
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = -3
Query: 749 GGGGRXXXXXXXXXXXXXXXXXXAXGGGXCGXRGXXXGXVPRGGXEXXGGGPPXGGXXGX 570
GGGG GGG CG G G GG GGG GG G
Sbjct: 61 GGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGG---GGGCGGGGGGCGGGGGGC 117
Query: 569 G 567
G
Sbjct: 118 G 118
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = -3
Query: 749 GGGGRXXXXXXXXXXXXXXXXXXAXGGGXCGXRGXXXGXVPRGGXEXXGGGPPXGGXXGX 570
GGGG GGG CG G G GG GGG GG G
Sbjct: 68 GGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGG---GGGCGGGGGGCGGGGGGC 124
Query: 569 G 567
G
Sbjct: 125 G 125
Score = 28.7 bits (61), Expect = 6.1
Identities = 22/73 (30%), Positives = 22/73 (30%)
Frame = -1
Query: 673 GGGXVGXGXXXXGGCPGGGGXXXVVAPLXGXXEXXXXXGXXAXGXXGFXGGRENGXXGXX 494
GGG GGC GGGG G G G G GG G G
Sbjct: 45 GGGCAPPPAPCGGGCGGGGGG---CGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGG 101
Query: 493 XXKXALXPXGGGG 455
GGGG
Sbjct: 102 GCGGGGGGCGGGG 114
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -3
Query: 674 GGGXCGXRGXXXGXVPRGGXEXXGGGPPXGGXXGXG 567
GGG CG G G GG GGG GG G G
Sbjct: 99 GGGGCGGGGGGCGG--GGGGCGGGGGGCGGGGGGCG 132
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Frame = -3
Query: 674 GGGXCGXRGXXXG----XVPRGGXEXXGGGPPXGG 582
GGG CG G G P GG GGG GG
Sbjct: 187 GGGGCGGGGSSGGGGYAVAPSGGGGCGGGGSSGGG 221
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 34.7 bits (76), Expect = 0.093
Identities = 28/80 (35%), Positives = 30/80 (37%), Gaps = 7/80 (8%)
Frame = -1
Query: 673 GGGXVGXGXXXXGGCPGG--GGXXXVVAPLXGXXEXXXXXGXXAXGXXGFX-----GGRE 515
GGG G G GGC GG GG VAP G G + G G+ GG
Sbjct: 157 GGGGGGCGGGGGGGCGGGSSGGGGYAVAPSGGGG----CGGGGSSGGGGYAVAPSGGGGC 212
Query: 514 NGXXGXXXXKXALXPXGGGG 455
G A P GGGG
Sbjct: 213 GGGGSSGGGGYASAPSGGGG 232
Score = 33.9 bits (74), Expect = 0.16
Identities = 24/73 (32%), Positives = 25/73 (34%)
Frame = -1
Query: 673 GGGXVGXGXXXXGGCPGGGGXXXVVAPLXGXXEXXXXXGXXAXGXXGFXGGRENGXXGXX 494
GG G G GGC GGGG G G A G GG G
Sbjct: 141 GGSSGGCGGGSSGGCGGGGGGGCGGGGGGGCGGGSSGGGGYAVAPSG--GGGCGGGGSSG 198
Query: 493 XXKXALXPXGGGG 455
A+ P GGGG
Sbjct: 199 GGGYAVAPSGGGG 211
Score = 33.5 bits (73), Expect = 0.21
Identities = 24/72 (33%), Positives = 24/72 (33%)
Frame = -1
Query: 673 GGGXVGXGXXXXGGCPGGGGXXXVVAPLXGXXEXXXXXGXXAXGXXGFXGGRENGXXGXX 494
GGG G G GGC GGGG AP G G G GG G G
Sbjct: 56 GGGCGGGG----GGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGGGGGCG 111
Query: 493 XXKXALXPXGGG 458
GGG
Sbjct: 112 GGGGGCGGGGGG 123
Score = 33.1 bits (72), Expect = 0.28
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = -1
Query: 673 GGGXVGXGXXXXGGCPGGGGXXXVVAPLXG 584
GGG G G GGC GGGG AP G
Sbjct: 28 GGGGGGCGGGCGGGCGGGGGCAPPPAPCGG 57
Score = 31.5 bits (68), Expect = 0.86
Identities = 24/73 (32%), Positives = 26/73 (35%)
Frame = -1
Query: 673 GGGXVGXGXXXXGGCPGGGGXXXVVAPLXGXXEXXXXXGXXAXGXXGFXGGRENGXXGXX 494
GGG G G GG GGGG + G G G G GG G
Sbjct: 120 GGGGCGGGGGGCGG-GGGGGCGGGSSGGCGGGSSGGCGGGGGGGCGG-GGGGGCGGGSSG 177
Query: 493 XXKXALXPXGGGG 455
A+ P GGGG
Sbjct: 178 GGGYAVAPSGGGG 190
Score = 29.5 bits (63), Expect = 3.5
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = -3
Query: 749 GGGGRXXXXXXXXXXXXXXXXXXAXGGGXCGXRGXXXGXVPRGGXEXXGGGPPXGGXXGX 570
GGGG GGG CG G G GG GGG GG G
Sbjct: 61 GGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGG---GGGCGGGGGGCGGGGGGC 117
Query: 569 G 567
G
Sbjct: 118 G 118
Score = 29.1 bits (62), Expect = 4.6
Identities = 20/61 (32%), Positives = 20/61 (32%)
Frame = -3
Query: 749 GGGGRXXXXXXXXXXXXXXXXXXAXGGGXCGXRGXXXGXVPRGGXEXXGGGPPXGGXXGX 570
GGGG GGG CG G G GG GGG GG G
Sbjct: 68 GGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGGGCGGG---GGGCGGGGGGCGGGGGGC 124
Query: 569 G 567
G
Sbjct: 125 G 125
Score = 28.7 bits (61), Expect = 6.1
Identities = 22/73 (30%), Positives = 22/73 (30%)
Frame = -1
Query: 673 GGGXVGXGXXXXGGCPGGGGXXXVVAPLXGXXEXXXXXGXXAXGXXGFXGGRENGXXGXX 494
GGG GGC GGGG G G G G GG G G
Sbjct: 45 GGGCAPPPAPCGGGCGGGGGG---CGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGCGGGG 101
Query: 493 XXKXALXPXGGGG 455
GGGG
Sbjct: 102 GCGGGGGGCGGGG 114
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -3
Query: 674 GGGXCGXRGXXXGXVPRGGXEXXGGGPPXGGXXGXG 567
GGG CG G G GG GGG GG G G
Sbjct: 99 GGGGCGGGGGGCGG--GGGGCGGGGGGCGGGGGGCG 132
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Frame = -3
Query: 674 GGGXCGXRGXXXG----XVPRGGXEXXGGGPPXGG 582
GGG CG G G P GG GGG GG
Sbjct: 187 GGGGCGGGGSSGGGGYAVAPSGGGGCGGGGSSGGG 221
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 32.7 bits (71), Expect = 0.37
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +1
Query: 568 PXPXLPPXGGPPPXXSXPPRGTXPXXXPLXPHXPPP 675
P P PP PPP PP P P+ P PPP
Sbjct: 47 PPPICPPQFCPPPPMCPPP--PPPPPPPMCPPPPPP 80
Score = 31.5 bits (68), Expect = 0.86
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 574 PXLPPXGGPPPXXSXPPRGTXPXXXPLXPHXPPP 675
P PP PPP PP P P P PPP
Sbjct: 32 PPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPP 65
Score = 29.9 bits (64), Expect = 2.6
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 568 PXPXLPPXGGPPPXXSXPPRGTXPXXXPLXPHXPPP 675
P P PP PP PP P P P PPP
Sbjct: 42 PLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPP 77
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 31.9 bits (69), Expect = 0.65
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Frame = +1
Query: 568 PXPXLPPXGG--PPPXXSXPPRGTXPXXXPLXPHXPPP 675
P P PP G PPP P R P P P PPP
Sbjct: 285 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 322
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 31.9 bits (69), Expect = 0.65
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Frame = +1
Query: 568 PXPXLPPXGG--PPPXXSXPPRGTXPXXXPLXPHXPPP 675
P P PP G PPP P R P P P PPP
Sbjct: 295 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPP 332
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.5 bits (68), Expect = 0.86
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Frame = +1
Query: 574 PXLPPXGG--PPPXXSXPPRGTXPXXXPLXPHXPPPXA 681
P PP GG PPP PP P P PPP A
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA 317
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/64 (29%), Positives = 19/64 (29%), Gaps = 3/64 (4%)
Frame = +1
Query: 574 PXLPPXGGPPPX---XSXPPRGTXPXXXPLXPHXPPPXAXXXXXXXXXXXXXXXXXXRPP 744
P PP G PPP S PP P P PP PP
Sbjct: 272 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 331
Query: 745 PPXQ 756
PP Q
Sbjct: 332 PPRQ 335
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/64 (28%), Positives = 18/64 (28%), Gaps = 3/64 (4%)
Frame = +1
Query: 568 PXPXLPPXGGPPPXXS---XPPRGTXPXXXPLXPHXPPPXAXXXXXXXXXXXXXXXXXXR 738
P P PP G PP S PP P PPP
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 296
Query: 739 PPPP 750
PPPP
Sbjct: 297 PPPP 300
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Frame = +1
Query: 568 PXPXLPPXGGPPPXXSXPPR--GTXPXXXPLXPHXPP 672
P P PP G PP PP+ G+ P P PP
Sbjct: 297 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 333
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.5 bits (68), Expect = 0.86
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Frame = +1
Query: 574 PXLPPXGG--PPPXXSXPPRGTXPXXXPLXPHXPPPXA 681
P PP GG PPP PP P P PPP A
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA 338
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/64 (29%), Positives = 19/64 (29%), Gaps = 3/64 (4%)
Frame = +1
Query: 574 PXLPPXGGPPPX---XSXPPRGTXPXXXPLXPHXPPPXAXXXXXXXXXXXXXXXXXXRPP 744
P PP G PPP S PP P P PP PP
Sbjct: 293 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 352
Query: 745 PPXQ 756
PP Q
Sbjct: 353 PPRQ 356
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/64 (28%), Positives = 18/64 (28%), Gaps = 3/64 (4%)
Frame = +1
Query: 568 PXPXLPPXGGPPPXXS---XPPRGTXPXXXPLXPHXPPPXAXXXXXXXXXXXXXXXXXXR 738
P P PP G PP S PP P PPP
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 317
Query: 739 PPPP 750
PPPP
Sbjct: 318 PPPP 321
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Frame = +1
Query: 568 PXPXLPPXGGPPPXXSXPPR--GTXPXXXPLXPHXPP 672
P P PP G PP PP+ G+ P P PP
Sbjct: 318 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 354
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.5 bits (68), Expect = 0.86
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Frame = +1
Query: 574 PXLPPXGG--PPPXXSXPPRGTXPXXXPLXPHXPPPXA 681
P PP GG PPP PP P P PPP A
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQA 323
Score = 31.1 bits (67), Expect = 1.1
Identities = 19/64 (29%), Positives = 19/64 (29%), Gaps = 3/64 (4%)
Frame = +1
Query: 574 PXLPPXGGPPPX---XSXPPRGTXPXXXPLXPHXPPPXAXXXXXXXXXXXXXXXXXXRPP 744
P PP G PPP S PP P P PP PP
Sbjct: 278 PPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPP 337
Query: 745 PPXQ 756
PP Q
Sbjct: 338 PPRQ 341
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/64 (28%), Positives = 18/64 (28%), Gaps = 3/64 (4%)
Frame = +1
Query: 568 PXPXLPPXGGPPPXXS---XPPRGTXPXXXPLXPHXPPPXAXXXXXXXXXXXXXXXXXXR 738
P P PP G PP S PP P PPP
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 302
Query: 739 PPPP 750
PPPP
Sbjct: 303 PPPP 306
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Frame = +1
Query: 568 PXPXLPPXGGPPPXXSXPPR--GTXPXXXPLXPHXPP 672
P P PP G PP PP+ G+ P P PP
Sbjct: 303 PPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPP 339
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 30.7 bits (66), Expect = 1.5
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -3
Query: 749 GGGGRXXXXXXXXXXXXXXXXXXAXGGGXCGXRGXXXGXVPRGGXEXXGGGPPXGGXXGX 570
GGGG GGG G G G GG GGG GG G
Sbjct: 76 GGGGNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGGRGR 135
Query: 569 G 567
G
Sbjct: 136 G 136
Score = 30.3 bits (65), Expect = 2.0
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = -3
Query: 674 GGGXCGXRGXXXGXVPRGGXEXXGGGPPXGGXXGXGXXRXR 552
GGG G G G RGG GGG GG G R R
Sbjct: 95 GGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGGGGRGR 135
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -3
Query: 674 GGGXCGXRGXXXGXVPRGGXEXXGGGPPXGGXXGXGXXR 558
GGG G G G GG GGG GG G G R
Sbjct: 90 GGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGR 128
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1
Query: 673 GGGXVGXGXXXXGGCPGGGG 614
GGG G G GGC GGGG
Sbjct: 110 GGGGGGCGGGGGGGCGGGGG 129
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -3
Query: 674 GGGXCGXRGXXXGXVPRGGXEXXGGGPPXGGXXGXG 567
GGG CG G G GG GGG GG G G
Sbjct: 98 GGGGCGGGGGCGGG-GGGGCGGGGGGGCGGGGGGGG 132
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -3
Query: 674 GGGXCGXRGXXXGXVPRGGXEXXGGGPPXGGXXGXG 567
GGG CG G G GG GGG GG G G
Sbjct: 86 GGGGCGGGGCGGGGGGCGGGGGCGGG--GGGGCGGG 119
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -3
Query: 674 GGGXCGXRGXXXGXVPRGGXEXXGGGPPXGGXXGXG 567
GGG CG G G GG GGG GG G G
Sbjct: 91 GGGGCGGGGGGCGG---GGGCGGGGGGGCGGGGGGG 123
>AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like
(grd related) protein20 protein.
Length = 163
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -1
Query: 673 GGGXVGXGXXXXGGCPGGGG 614
GGG G G GGC GGGG
Sbjct: 22 GGGGGGCGGGCGGGCGGGGG 41
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +2
Query: 584 PPXGGHHXXXPXPPGAPXPXXXPXXHTAPPXKP 682
PP +H P P G P P +T PP P
Sbjct: 78 PPHHQYHLQYPPPHGLGPPPPPPHYYTQPPPPP 110
>Z68106-4|CAA92128.1| 112|Caenorhabditis elegans Hypothetical
protein F41E7.5 protein.
Length = 112
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 674 GGGXCGXRGXXXGXVPRGGXEXXGGGPPXGGXXG 573
G G G G G GG GGGP GG G
Sbjct: 66 GNGGFGGNGGFGGGPSYGGRGGFGGGPGFGGRGG 99
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = +1
Query: 574 PXLPPXG-GPPPXXSXPPRGTXPXXXP 651
P PP G GPPP PP G P P
Sbjct: 717 PAPPPPGVGPPPPQGIPPMGFDPNKPP 743
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +1
Query: 574 PXLPPXGGPPPXXSXPPRGTXPXXXPLXPHXPPP 675
P PP PP PP+G P P+ PPP
Sbjct: 713 PGYPPAPPPPGVGPPPPQGIPPMG--FDPNKPPP 744
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 674 GGGXCGXRGXXXGXVPRGGXEXXGGGPPXGGXXGXG 567
GGG G G G GG GGG GG G G
Sbjct: 30 GGGGGGYSGGRGGGYGGGGGGGYGGGGYGGGGRGGG 65
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 674 GGGXCGXRGXXXGXVPRGGXEXXGGGPPXGGXXGXG 567
GGG G G G GG GGG GG G G
Sbjct: 60 GGGGGGFGGGNGGFGGGGGGNYGGGGGNQGGGGGGG 95
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -3
Query: 674 GGGXCGXRGXXXGXVPRGGXEXXGGGPPXGGXXGXG 567
GGG G RG G RGG GG GG G G
Sbjct: 10 GGGFRGGRGGGGGGGFRGGRGGDRGGGFRGGRGGFG 45
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -3
Query: 674 GGGXCGXRGXXXGXVPRGGXEXXGGG 597
GGG G RG G PRGG GG
Sbjct: 11 GGGFRGGRGGGSGFTPRGGGGGFRGG 36
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 28.7 bits (61), Expect = 6.1
Identities = 22/76 (28%), Positives = 25/76 (32%), Gaps = 1/76 (1%)
Frame = -1
Query: 679 LXGGGXVGXGXXXXGGCP-GGGGXXXVVAPLXGXXEXXXXXGXXAXGXXGFXGGRENGXX 503
+ GGG G G GG GGGG + G G G G G +G
Sbjct: 170 MGGGGYGGGGDGGYGGGGFGGGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDGGYGPSGGY 229
Query: 502 GXXXXKXALXPXGGGG 455
G GGGG
Sbjct: 230 GGGYGPGGGYGMGGGG 245
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 674 GGGXCGXRGXXXGXVPRGGXEXXGGGPPXGGXXGXG 567
GGG G G G GG GGG GG G G
Sbjct: 189 GGGGMGGYGGGMGGGGYGGGGMGGGGYGGGGDGGYG 224
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 28.3 bits (60), Expect = 8.1
Identities = 22/73 (30%), Positives = 24/73 (32%)
Frame = -1
Query: 673 GGGXVGXGXXXXGGCPGGGGXXXVVAPLXGXXEXXXXXGXXAXGXXGFXGGRENGXXGXX 494
G G G G GG GGGG + L G G G G GG G
Sbjct: 69 GNGGFGGGGGGSGG--GGGGNN--IGSLVGSLIGGGGGGGNYGGGGGNQGGGGGGGFNFN 124
Query: 493 XXKXALXPXGGGG 455
+ GGGG
Sbjct: 125 DIGGLINSMGGGG 137
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 28.3 bits (60), Expect = 8.1
Identities = 16/58 (27%), Positives = 18/58 (31%), Gaps = 2/58 (3%)
Frame = +1
Query: 583 PPXGGPPPXXSXPPRGTXPXXXPLXP--HXPPPXAXXXXXXXXXXXXXXXXXXRPPPP 750
PP GPP + PP P P + PPP PPPP
Sbjct: 381 PPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPP 438
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,965,412
Number of Sequences: 27780
Number of extensions: 212388
Number of successful extensions: 1516
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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