Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_F06
         (898 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    31   1.5  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    31   1.5  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    31   1.5  
Z83112-1|CAB05538.1|  742|Caenorhabditis elegans Hypothetical pr...    29   6.0  
Z66567-3|CAA91489.1|  444|Caenorhabditis elegans Hypothetical pr...    28   7.9  

>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoformb protein.
          Length = 1437

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 23/76 (30%), Positives = 24/76 (31%), Gaps = 2/76 (2%)
 Frame = +1

Query: 502 PLXGGXXXPPXXKXTXGXXXPPPXXXGEKXSFFXXHXXXLXLFXXPP--XXPXKXPPPPX 675
           P+ GG   PP      G   PPP   G                  PP    P   PPPP 
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGG-LPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766

Query: 676 XXXPFFFXXPPGGXXG 723
              P     PPGG  G
Sbjct: 767 GCPPPPPPPPPGGFKG 782


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
           protein 1, isoforma protein.
          Length = 1435

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 23/76 (30%), Positives = 24/76 (31%), Gaps = 2/76 (2%)
 Frame = +1

Query: 502 PLXGGXXXPPXXKXTXGXXXPPPXXXGEKXSFFXXHXXXLXLFXXPP--XXPXKXPPPPX 675
           P+ GG   PP      G   PPP   G                  PP    P   PPPP 
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGG-LPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 766

Query: 676 XXXPFFFXXPPGGXXG 723
              P     PPGG  G
Sbjct: 767 GCPPPPPPPPPGGFKG 782


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 23/76 (30%), Positives = 24/76 (31%), Gaps = 2/76 (2%)
 Frame = +1

Query: 502 PLXGGXXXPPXXKXTXGXXXPPPXXXGEKXSFFXXHXXXLXLFXXPP--XXPXKXPPPPX 675
           P+ GG   PP      G   PPP   G                  PP    P   PPPP 
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGG-LPPITGGPPPPPPPGGLPPISGGPPPPPPPPG 349

Query: 676 XXXPFFFXXPPGGXXG 723
              P     PPGG  G
Sbjct: 350 GCPPPPPPPPPGGFKG 365


>Z83112-1|CAB05538.1|  742|Caenorhabditis elegans Hypothetical
           protein K02B7.1 protein.
          Length = 742

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +1

Query: 178 PSWSPLGRGCCQLQNGFVERYHVPIYLVLSNC 273
           P +SP G G C  QN ++   H+  +L    C
Sbjct: 429 PHYSPKGNGICSRQNRWIFHQHLRFHLDFVRC 460


>Z66567-3|CAA91489.1|  444|Caenorhabditis elegans Hypothetical
           protein ZK455.3 protein.
          Length = 444

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = +3

Query: 96  LRN*TSAILCQVGYSPIAFRVGLHPSAAILVAAGAWLLPATKWVCRTVS 242
           +RN T+ ++  +  S + F +   P  A+  AA  W+ P  +W C  ++
Sbjct: 73  MRNSTNTLIIGLAISDLMFLLLCVPFTAVDYAAPTWIFP--EWTCSMIN 119


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,643,804
Number of Sequences: 27780
Number of extensions: 274816
Number of successful extensions: 689
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)