Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_F04
(1386 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 38 0.022
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 36 0.068
Z50858-2|CAD44134.1| 467|Caenorhabditis elegans Hypothetical pr... 36 0.089
Z50858-1|CAA90721.1| 453|Caenorhabditis elegans Hypothetical pr... 36 0.089
AF408757-1|AAO27836.1| 456|Caenorhabditis elegans nucleobindin ... 36 0.089
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 36 0.089
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 36 0.089
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 36 0.089
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 34 0.21
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 34 0.21
AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical... 33 0.48
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 33 0.63
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 32 1.1
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 32 1.1
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 32 1.1
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 32 1.1
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.5
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.5
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical... 31 1.9
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 31 2.5
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 2.5
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 31 2.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 31 2.5
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 31 2.5
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 31 2.5
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 31 2.5
Z70266-6|CAD57691.1| 795|Caenorhabditis elegans Hypothetical pr... 30 3.4
Z70266-5|CAA94208.1| 798|Caenorhabditis elegans Hypothetical pr... 30 3.4
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 30 3.4
AL023827-4|CAD57709.1| 795|Caenorhabditis elegans Hypothetical ... 30 3.4
AL023827-3|CAA19446.1| 798|Caenorhabditis elegans Hypothetical ... 30 3.4
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 3.4
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 30 4.4
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 30 4.4
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 30 4.4
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 30 4.4
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 4.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 4.4
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 30 4.4
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 30 4.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 4.4
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 4.4
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 29 7.8
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 29 7.8
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 7.8
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical protein
Y49E10.10 protein.
Length = 425
Score = 37.5 bits (83), Expect = 0.022
Identities = 22/71 (30%), Positives = 24/71 (33%)
Frame = +3
Query: 1173 PPPHTKSQXXQXTHXASXPAHXTXXTRXXXTQAPPPXXQPXXPPXPPPPXXTRPRXXXXP 1352
PPP TK+ T P T P P P P PP P T +
Sbjct: 192 PPPTTKAPPPPTTKAPPPPTTNKEVTTVAPVPKPAPVTAPA--PNPPAPENTTAKVETTK 249
Query: 1353 PXHHXPPAXTP 1385
P PPA TP
Sbjct: 250 PTKAAPPAPTP 260
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 35.9 bits (79), Expect = 0.068
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = +3
Query: 1269 APPPXXQPXXPPXPPPPXXTRPRXXXXPPXHHXPPAXTP 1385
APPP P PP PPPP P PP P P
Sbjct: 706 APPPPGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPP 744
>Z50858-2|CAD44134.1| 467|Caenorhabditis elegans Hypothetical protein
F44A6.1b protein.
Length = 467
Score = 35.5 bits (78), Expect = 0.089
Identities = 19/59 (32%), Positives = 20/59 (33%)
Frame = +3
Query: 1194 QXXQXTHXASXPAHXTXXTRXXXTQAPPPXXQPXXPPXPPPPXXTRPRXXXXPPXHHXP 1370
Q Q H A P A PP Q PP PP +P PP HH P
Sbjct: 400 QAQQQVHPAQQPIQPVNANPPPVQNAQPPVQQQQQPPQQPP---QQPPQQNLPPVHHEP 455
>Z50858-1|CAA90721.1| 453|Caenorhabditis elegans Hypothetical protein
F44A6.1a protein.
Length = 453
Score = 35.5 bits (78), Expect = 0.089
Identities = 19/59 (32%), Positives = 20/59 (33%)
Frame = +3
Query: 1194 QXXQXTHXASXPAHXTXXTRXXXTQAPPPXXQPXXPPXPPPPXXTRPRXXXXPPXHHXP 1370
Q Q H A P A PP Q PP PP +P PP HH P
Sbjct: 386 QAQQQVHPAQQPIQPVNANPPPVQNAQPPVQQQQQPPQQPP---QQPPQQNLPPVHHEP 441
>AF408757-1|AAO27836.1| 456|Caenorhabditis elegans nucleobindin
protein.
Length = 456
Score = 35.5 bits (78), Expect = 0.089
Identities = 19/59 (32%), Positives = 20/59 (33%)
Frame = +3
Query: 1194 QXXQXTHXASXPAHXTXXTRXXXTQAPPPXXQPXXPPXPPPPXXTRPRXXXXPPXHHXP 1370
Q Q H A P A PP Q PP PP +P PP HH P
Sbjct: 389 QAQQQVHPAQQPIQPVNANPPPVQNAQPPVQQQQQPPQQPP---QQPPQQNLPPVHHEP 444
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 35.5 bits (78), Expect = 0.089
Identities = 21/72 (29%), Positives = 24/72 (33%), Gaps = 2/72 (2%)
Frame = +3
Query: 1173 PPPHTKSQXXQXTHXASXPAHXTXXTRXXXTQAPPPXXQPXXPPXPPPPXXTRPRXXXXP 1352
PPP + S P T PP + PP PPPP + P P
Sbjct: 255 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
Query: 1353 P--XHHXPPAXT 1382
P PPA T
Sbjct: 315 PQAGGSPPPAGT 326
Score = 29.5 bits (63), Expect = 5.9
Identities = 19/71 (26%), Positives = 22/71 (30%)
Frame = +3
Query: 1173 PPPHTKSQXXQXTHXASXPAHXTXXTRXXXTQAPPPXXQPXXPPXPPPPXXTRPRXXXXP 1352
PPP K + P T +PPP PP P PR P
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 298
Query: 1353 PXHHXPPAXTP 1385
P PP +P
Sbjct: 299 PP--PPPRGSP 307
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 35.5 bits (78), Expect = 0.089
Identities = 21/72 (29%), Positives = 24/72 (33%), Gaps = 2/72 (2%)
Frame = +3
Query: 1173 PPPHTKSQXXQXTHXASXPAHXTXXTRXXXTQAPPPXXQPXXPPXPPPPXXTRPRXXXXP 1352
PPP + S P T PP + PP PPPP + P P
Sbjct: 276 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
Query: 1353 P--XHHXPPAXT 1382
P PPA T
Sbjct: 336 PQAGGSPPPAGT 347
Score = 29.5 bits (63), Expect = 5.9
Identities = 19/71 (26%), Positives = 22/71 (30%)
Frame = +3
Query: 1173 PPPHTKSQXXQXTHXASXPAHXTXXTRXXXTQAPPPXXQPXXPPXPPPPXXTRPRXXXXP 1352
PPP K + P T +PPP PP P PR P
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 319
Query: 1353 PXHHXPPAXTP 1385
P PP +P
Sbjct: 320 PP--PPPRGSP 328
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 35.5 bits (78), Expect = 0.089
Identities = 21/72 (29%), Positives = 24/72 (33%), Gaps = 2/72 (2%)
Frame = +3
Query: 1173 PPPHTKSQXXQXTHXASXPAHXTXXTRXXXTQAPPPXXQPXXPPXPPPPXXTRPRXXXXP 1352
PPP + S P T PP + PP PPPP + P P
Sbjct: 261 PPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
Query: 1353 P--XHHXPPAXT 1382
P PPA T
Sbjct: 321 PQAGGSPPPAGT 332
Score = 29.5 bits (63), Expect = 5.9
Identities = 19/71 (26%), Positives = 22/71 (30%)
Frame = +3
Query: 1173 PPPHTKSQXXQXTHXASXPAHXTXXTRXXXTQAPPPXXQPXXPPXPPPPXXTRPRXXXXP 1352
PPP K + P T +PPP PP P PR P
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 304
Query: 1353 PXHHXPPAXTP 1385
P PP +P
Sbjct: 305 PP--PPPRGSP 313
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical protein
Y48E1B.1 protein.
Length = 497
Score = 34.3 bits (75), Expect = 0.21
Identities = 18/52 (34%), Positives = 20/52 (38%)
Frame = +3
Query: 1173 PPPHTKSQXXQXTHXASXPAHXTXXTRXXXTQAPPPXXQPXXPPXPPPPXXT 1328
PPP + A+ P T APPP P PP PPPP T
Sbjct: 324 PPPPPPMKLDPSPQPAATPVEITEIPPIISPPAPPP---PPPPPPPPPPPQT 372
Score = 29.9 bits (64), Expect = 4.4
Identities = 13/36 (36%), Positives = 15/36 (41%)
Frame = +3
Query: 1227 PAHXTXXTRXXXTQAPPPXXQPXXPPXPPPPXXTRP 1334
P+ T T+ PP P PP PPPP P
Sbjct: 334 PSPQPAATPVEITEIPPIISPPAPPPPPPPPPPPPP 369
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 34.3 bits (75), Expect = 0.21
Identities = 19/70 (27%), Positives = 22/70 (31%)
Frame = +3
Query: 1176 PPHTKSQXXQXTHXASXPAHXTXXTRXXXTQAPPPXXQPXXPPXPPPPXXTRPRXXXXPP 1355
PP Q H + P + AP PP PPPP +R PP
Sbjct: 81 PPPAHPHHLQHPHPYAYPGYPVPGQEGHQVPAPQHGDHEASPPPPPPPRKSRAGGSSPPP 140
Query: 1356 XHHXPPAXTP 1385
PP P
Sbjct: 141 ---PPPPRVP 147
Score = 33.5 bits (73), Expect = 0.36
Identities = 18/58 (31%), Positives = 19/58 (32%)
Frame = +3
Query: 1212 HXASXPAHXTXXTRXXXTQAPPPXXQPXXPPXPPPPXXTRPRXXXXPPXHHXPPAXTP 1385
H AS P +PPP P P PPP R PP P TP
Sbjct: 118 HEASPPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTP 175
Score = 31.1 bits (67), Expect = 1.9
Identities = 20/72 (27%), Positives = 25/72 (34%), Gaps = 5/72 (6%)
Frame = +3
Query: 1173 PPPHTKSQXXQXTHXASXPAHXTXXTRXXXTQAPPPXXQPXXPPXP---PP--PXXTRPR 1337
PPP + + + P R ++PPP P PP P PP P PR
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPR 181
Query: 1338 XXXXPPXHHXPP 1373
P PP
Sbjct: 182 NPPRTPPSPIPP 193
Score = 29.1 bits (62), Expect = 7.8
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 1272 PPPXXQPXXPPXPPPPXXTRPRXXXXPPXHHXPPAXTP 1385
PP P PP PP RP P PP P
Sbjct: 151 PPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPP 188
>AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical
protein Y51H4A.12 protein.
Length = 1677
Score = 33.1 bits (72), Expect = 0.48
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = +3
Query: 1176 PPHTKSQXXQXTHXASXPAHXTXXTRXXXTQAPPPXXQPXXPPXPPPPXXTRP 1334
PPH +Q + H A T P P PP PPPP RP
Sbjct: 587 PPHRMTQEEKNAHFARLTTDKEKPTSSASI-LPQDAAPPHVPPPPPPPLVLRP 638
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 32.7 bits (71), Expect = 0.63
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = +3
Query: 1266 QAPPPXXQPXXPPXPPPP 1319
+APPP P PP PPPP
Sbjct: 132 EAPPPPPSPPPPPPPPPP 149
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.9 bits (69), Expect = 1.1
Identities = 31/120 (25%), Positives = 33/120 (27%), Gaps = 2/120 (1%)
Frame = +3
Query: 1032 TVXAPXPPCYXPXXXXXXXTPXATXPXX--PPRXXXLTAXXA*XKXXDXPPPHTKSQXXQ 1205
T P P Y P A P P L + PPP Q
Sbjct: 48 TAPPPPPAPYPQQAVPAPAPPPAPYPQHAVPAPAPPLASYPQNAVPVPAPPPAPYPQ--- 104
Query: 1206 XTHXASXPAHXTXXTRXXXTQAPPPXXQPXXPPXPPPPXXTRPRXXXXPPXHHXPPAXTP 1385
H PA AP P Q PP PPP PP H+ PP P
Sbjct: 105 --HAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPP-------HYPPPPPHYPPPPPAP 155
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.9 bits (69), Expect = 1.1
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +3
Query: 1272 PPPXXQPXXPPXPPPPXXTRPRXXXXPPXHHXPPAXTP 1385
PPP P P PPPP P+ PP PP P
Sbjct: 34 PPPMCAPPPLPCPPPPICP-PQFCPPPPMCPPPPPPPP 70
Score = 29.9 bits (64), Expect = 4.4
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 1272 PPPXXQPXXPPXPPPPXXTRP 1334
PPP P PP PPPP P
Sbjct: 57 PPPPMCPPPPPPPPPPMCPPP 77
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 3/42 (7%)
Frame = +3
Query: 1269 APPPXXQPXXPPXPP---PPXXTRPRXXXXPPXHHXPPAXTP 1385
APPP P P PP PP P PP PP P
Sbjct: 39 APPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPP 80
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical protein
R144.4a protein.
Length = 360
Score = 31.9 bits (69), Expect = 1.1
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 1272 PPPXXQPXXPPXPPPPXXTRP 1334
PPP P PP PPPP + P
Sbjct: 2 PPPPPPPPPPPPPPPPAASAP 22
Score = 29.1 bits (62), Expect = 7.8
Identities = 13/49 (26%), Positives = 17/49 (34%)
Frame = +3
Query: 1173 PPPHTKSQXXQXTHXASXPAHXTXXTRXXXTQAPPPXXQPXXPPXPPPP 1319
P P + + +S H + PPP P P PPPP
Sbjct: 128 PVPAVEGKKPSIVSSSSFSHHGATSSAPPPPPPPPPVSVPSSKPTPPPP 176
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical protein
R144.4b protein.
Length = 362
Score = 31.9 bits (69), Expect = 1.1
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 1272 PPPXXQPXXPPXPPPPXXTRP 1334
PPP P PP PPPP + P
Sbjct: 2 PPPPPPPPPPPPPPPPAASAP 22
Score = 29.1 bits (62), Expect = 7.8
Identities = 13/49 (26%), Positives = 17/49 (34%)
Frame = +3
Query: 1173 PPPHTKSQXXQXTHXASXPAHXTXXTRXXXTQAPPPXXQPXXPPXPPPP 1319
P P + + +S H + PPP P P PPPP
Sbjct: 128 PVPAVEGKKPSIVSSSSFSHHGATSSAPPPPPPPPPVSVPSSKPTPPPP 176
Score = 26.6 bits (56), Expect(2) = 2.4
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 1299 PPXPPPPXXTRPRXXXXPPXHHXPPA 1376
PP PPPP + P PP PPA
Sbjct: 156 PPPPPPPPVSVPSSKPTPPP--PPPA 179
Score = 22.6 bits (46), Expect(2) = 2.4
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +3
Query: 1251 RXXXTQAPPPXXQPXXPPXPPP 1316
R T PP PP PPP
Sbjct: 105 RRATTSIGPPPTASSAPPVPPP 126
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical protein
E02A10.2 protein.
Length = 385
Score = 31.5 bits (68), Expect = 1.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -3
Query: 1339 CRGRVXXGGGGXGGXXG*XXGGGAC 1265
C G GGGG GG G GGG C
Sbjct: 61 CGGGCGGGGGGCGGGGGGCGGGGGC 85
Score = 29.1 bits (62), Expect = 7.8
Identities = 26/97 (26%), Positives = 26/97 (26%)
Frame = -3
Query: 1333 GRVXXGGGGXGGXXG*XXGGGACVXXXRVXCVXXAGXEAXCVXXXXXDFVXGGGXSSXLX 1154
G GGGG GG G GGG C C G C GGG
Sbjct: 70 GGCGGGGGGCGGGGGCGGGGGGC-GGGGGGCGGGGGCGGGCAPPPPPP-ACGGGCGGGGG 127
Query: 1153 HAXXAVXXXXRGGIXGXVAXGVXXXXFXXGX*XGGXG 1043
GG G G G GG G
Sbjct: 128 GCGGGCGGGGGGGCGGGGGGGCGGGGGGCGGGGGGCG 164
Score = 29.1 bits (62), Expect = 7.8
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 1385 GCXGGGXVVXXGGXXXSGSGXXGRGGXRG 1299
GC GGG GG G G G GG G
Sbjct: 78 GCGGGGGCGGGGGGCGGGGGGCGGGGGCG 106
Score = 29.1 bits (62), Expect = 7.8
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 1385 GCXGGGXVVXXGGXXXSGSGXXGRGGXRG 1299
GC GGG GG G G G GG G
Sbjct: 155 GCGGGGGGCGGGGGGCGGGGGGGCGGGGG 183
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 1.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -3
Query: 1339 CRGRVXXGGGGXGGXXG*XXGGGAC 1265
C G GGGG GG G GGG C
Sbjct: 79 CGGGCGGGGGGCGGGGGGCGGGGGC 103
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = -1
Query: 756 GRXGGVXXG-AGVSXXGXXCAAXXAXXPSPPPXPP 655
G GG G AG S G A A P PPP PP
Sbjct: 277 GGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPP 311
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 31.5 bits (68), Expect = 1.5
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = -3
Query: 1339 CRGRVXXGGGGXGGXXG*XXGGGAC 1265
C G GGGG GG G GGG C
Sbjct: 79 CGGGCGGGGGGCGGGGGGCGGGGGC 103
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 1/35 (2%)
Frame = -1
Query: 756 GRXGGVXXG-AGVSXXGXXCAAXXAXXPSPPPXPP 655
G GG G AG S G A A P PPP PP
Sbjct: 277 GGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPPPP 311
>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
protein F15E6.1 protein.
Length = 1655
Score = 31.1 bits (67), Expect = 1.9
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = +3
Query: 1176 PPHTKSQXXQXTHXASXPAHXTXXTRXXXTQAPPPXXQPXXPPXPPPPXXTRP 1334
PPH +Q + H A T T P P P PPPP RP
Sbjct: 582 PPHRMTQEEKNAHFARLTTDKEKPTSS--TSILPQDAAPPHVPPPPPPLVLRP 632
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical protein
ZK1010.5 protein.
Length = 756
Score = 30.7 bits (66), Expect = 2.5
Identities = 15/59 (25%), Positives = 20/59 (33%)
Frame = +3
Query: 1179 PHTKSQXXQXTHXASXPAHXTXXTRXXXTQAPPPXXQPXXPPXPPPPXXTRPRXXXXPP 1355
P + + + P T T+A P QP PP P P P+ PP
Sbjct: 602 PEPVTDGPNESQSTALPQQTTDAPVDPVTEASPLNPQPPPPPSPSPEPEPEPKPPVTPP 660
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 2.5
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 8 PXGXXPPXXGXXGGRFRPTPLXGXXPPPP 94
P G PP GG P P+ G PPPP
Sbjct: 80 PGGIPPPPPMFAGGIPPPPPMMGGIPPPP 108
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 30.7 bits (66), Expect = 2.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 1272 PPPXXQPXXPPXPPPPXXTRPRXXXXPPXHHXPP 1373
PPP PP PPPP P P PP
Sbjct: 288 PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 321
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +3
Query: 1272 PPPXXQ-PXXPPXPPPPXXTRPRXXXXPPXHHXPPAXTP 1385
PPP P PP PP P T PR P PP P
Sbjct: 265 PPPPSVTPMPPPMPPTPGMT-PRPPPPPSSGMWPPPPPP 302
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 30.7 bits (66), Expect = 2.5
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 1272 PPPXXQPXXPPXPPPPXXTRPRXXXXPPXHHXPP 1373
PPP PP PPPP P P PP
Sbjct: 298 PPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 331
Score = 29.1 bits (62), Expect = 7.8
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +3
Query: 1272 PPPXXQ-PXXPPXPPPPXXTRPRXXXXPPXHHXPPAXTP 1385
PPP P PP PP P T PR P PP P
Sbjct: 275 PPPPSVTPMPPPMPPTPGMT-PRPPPPPSSGMWPPPPPP 312
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 30.7 bits (66), Expect = 2.5
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 1266 QAPPPXXQPXXPPXPPPPXXTRP 1334
+ PPP PP PPPP T P
Sbjct: 782 ELPPPPRASEPPPPPPPPVATAP 804
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 30.7 bits (66), Expect = 2.5
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 1272 PPPXXQPXXPPXPPPPXXTRPRXXXXPPXHHXPP 1373
PPP QP PP PP RP P PP
Sbjct: 693 PPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPP 726
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like protein
protein.
Length = 789
Score = 30.7 bits (66), Expect = 2.5
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 1272 PPPXXQPXXPPXPPPPXXTRPRXXXXPPXHHXPP 1373
PPP QP PP PP RP P PP
Sbjct: 693 PPPPGQPYGPPGGYPPQQQRPPYQAQPYPGPPPP 726
>Z70266-6|CAD57691.1| 795|Caenorhabditis elegans Hypothetical protein
C40C9.5b protein.
Length = 795
Score = 30.3 bits (65), Expect = 3.4
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 1248 TRXXXTQAPPPXXQPXXPPXPPPPXXTRPRXXXXP 1352
TR + A P P PP PPP T+P+ P
Sbjct: 629 TRHFSSYANLPFPPPPMPPSPPPELTTKPKPSESP 663
>Z70266-5|CAA94208.1| 798|Caenorhabditis elegans Hypothetical protein
C40C9.5a protein.
Length = 798
Score = 30.3 bits (65), Expect = 3.4
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 1248 TRXXXTQAPPPXXQPXXPPXPPPPXXTRPRXXXXP 1352
TR + A P P PP PPP T+P+ P
Sbjct: 629 TRHFSSYANLPFPPPPMPPSPPPELTTKPKPSESP 663
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 30.3 bits (65), Expect = 3.4
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = +3
Query: 1272 PPPXXQPXXPPX-PPPPXXTR-PRXXXXPPXHHXPPAXTP 1385
PPP + PP PPP R P PP H PP P
Sbjct: 41 PPPWHRNRGPPPFGPPPPWDRPPPPWRRPPWHRRPPWGLP 80
Score = 29.9 bits (64), Expect = 4.4
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 1275 PPXXQPXXPPXPPPPXXTRPRXXXXPPXHHXPPAXTP 1385
PP P P PPP RP PP PP P
Sbjct: 50 PPPFGPPPPWDRPPPPWRRPPWHRRPPWGLPPPPPPP 86
>AL023827-4|CAD57709.1| 795|Caenorhabditis elegans Hypothetical
protein C40C9.5b protein.
Length = 795
Score = 30.3 bits (65), Expect = 3.4
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 1248 TRXXXTQAPPPXXQPXXPPXPPPPXXTRPRXXXXP 1352
TR + A P P PP PPP T+P+ P
Sbjct: 629 TRHFSSYANLPFPPPPMPPSPPPELTTKPKPSESP 663
>AL023827-3|CAA19446.1| 798|Caenorhabditis elegans Hypothetical
protein C40C9.5a protein.
Length = 798
Score = 30.3 bits (65), Expect = 3.4
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +3
Query: 1248 TRXXXTQAPPPXXQPXXPPXPPPPXXTRPRXXXXP 1352
TR + A P P PP PPP T+P+ P
Sbjct: 629 TRHFSSYANLPFPPPPMPPSPPPELTTKPKPSESP 663
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 30.3 bits (65), Expect = 3.4
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -1
Query: 747 GGVXXGAGVSXXGXXCAAXXAXXPSPPPXPP 655
GG G G G CAA + P+ PP PP
Sbjct: 112 GGGGGGGGGGGGGCHCAAQASGCPAGPPGPP 142
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical protein
F25H8.5c protein.
Length = 732
Score = 29.9 bits (64), Expect = 4.4
Identities = 15/46 (32%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = +3
Query: 1251 RXXXTQAPPPXXQPXXPPXPPPPXXTRPRXXXXPPXHH-XPPAXTP 1385
R T PPP PP PPP + + PP PP P
Sbjct: 87 RPQPTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQPQP 132
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical protein
F25H8.5b protein.
Length = 369
Score = 29.9 bits (64), Expect = 4.4
Identities = 15/46 (32%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = +3
Query: 1251 RXXXTQAPPPXXQPXXPPXPPPPXXTRPRXXXXPPXHH-XPPAXTP 1385
R T PPP PP PPP + + PP PP P
Sbjct: 87 RPQPTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQPQP 132
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical protein
F25H8.5a protein.
Length = 780
Score = 29.9 bits (64), Expect = 4.4
Identities = 15/46 (32%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = +3
Query: 1251 RXXXTQAPPPXXQPXXPPXPPPPXXTRPRXXXXPPXHH-XPPAXTP 1385
R T PPP PP PPP + + PP PP P
Sbjct: 87 RPQPTPGPPPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQPPQPQP 132
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical protein
C50F7.5 protein.
Length = 309
Score = 29.9 bits (64), Expect = 4.4
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = +3
Query: 1275 PPXXQPXXPPXPPPPXXTRPRXXXXPPXHHXPPAXTP 1385
P P PP PP P RP PP P P
Sbjct: 238 PSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGP 274
Score = 29.1 bits (62), Expect = 7.8
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 1275 PPXXQPXXPPXPPPPXXTRPRXXXXPPXHHXP 1370
PP PP PP P RP PP P
Sbjct: 249 PPGPPTRRPPGPPGPPTRRPPGPPGPPTRRPP 280
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 4.4
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = +3
Query: 1272 PPPXXQPXX--PPXPPPPXXTRPRXXXXPPXHHXPPAXTP 1385
PPP P PP PPPP P PP PP P
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPP--PPPGGLP 752
Score = 29.9 bits (64), Expect = 4.4
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Frame = +3
Query: 1272 PPPXXQPXXP--PXPPPPXXTRPRXXXXPPXHHXPPAXTP 1385
PPP P P PPPP P PP PP P
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 29.9 bits (64), Expect = 4.4
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +3
Query: 1272 PPPXXQPXXPPXPPPPXXTRPRXXXXPPXHHXPPAXTP 1385
PPP PP PPPP P P + PP P
Sbjct: 775 PPPGGFKGGPPPPPPPGMFAPMAPVIP--DYLPPKKVP 810
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 4.4
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = +3
Query: 1272 PPPXXQPXX--PPXPPPPXXTRPRXXXXPPXHHXPPAXTP 1385
PPP P PP PPPP P PP PP P
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPP--PPPGGLP 752
Score = 29.9 bits (64), Expect = 4.4
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Frame = +3
Query: 1272 PPPXXQPXXP--PXPPPPXXTRPRXXXXPPXHHXPPAXTP 1385
PPP P P PPPP P PP PP P
Sbjct: 730 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 769
Score = 29.9 bits (64), Expect = 4.4
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +3
Query: 1272 PPPXXQPXXPPXPPPPXXTRPRXXXXPPXHHXPPAXTP 1385
PPP PP PPPP P P + PP P
Sbjct: 775 PPPGGFKGGPPPPPPPGMFAPMAPVIP--DYLPPKKVP 810
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 29.9 bits (64), Expect = 4.4
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = -2
Query: 1385 GCXGGGXVVXXGGXXXSGSGXXGRGGXRGRXRLXRXXGG 1269
G GGG GG SG G G GG R R R GG
Sbjct: 213 GGSGGGGGGGGGGGYGSGGGWGGGGGGRDRDRGGWGGGG 251
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 29.9 bits (64), Expect = 4.4
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +3
Query: 1251 RXXXTQAPPPXXQPXXPPXPPPPXXTRPR 1337
R + P P +P P PPPP +PR
Sbjct: 553 REPTPREPTPEPEPVREPTPPPPPPAKPR 581
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 4.4
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = +3
Query: 1272 PPPXXQPXX--PPXPPPPXXTRPRXXXXPPXHHXPPAXTP 1385
PPP P PP PPPP P PP PP P
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPPP--PPPGGLP 335
Score = 29.9 bits (64), Expect = 4.4
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Frame = +3
Query: 1272 PPPXXQPXXP--PXPPPPXXTRPRXXXXPPXHHXPPAXTP 1385
PPP P P PPPP P PP PP P
Sbjct: 313 PPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCP 352
Score = 29.9 bits (64), Expect = 4.4
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +3
Query: 1272 PPPXXQPXXPPXPPPPXXTRPRXXXXPPXHHXPPAXTP 1385
PPP PP PPPP P P + PP P
Sbjct: 358 PPPGGFKGGPPPPPPPGMFAPMAPVIP--DYLPPKKVP 393
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.9 bits (64), Expect = 4.4
Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 2/40 (5%)
Frame = +3
Query: 1272 PPPXXQ--PXXPPXPPPPXXTRPRXXXXPPXHHXPPAXTP 1385
PPP P PP PPPP ++ P PP +P
Sbjct: 1346 PPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSP 1385
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 29.1 bits (62), Expect = 7.8
Identities = 15/50 (30%), Positives = 18/50 (36%)
Frame = +1
Query: 667 GRRXXXXGGGRTXPAXXXNXGXXXDPPXPPXTNPPXXXGXXXRXGPATPP 816
G R G R+ P+ G +P P P G R GP PP
Sbjct: 192 GGRPGQAGQTRSAPSPPGQPGQPGEPGSPGEPGPDGRAGHPGRNGPPGPP 241
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 29.1 bits (62), Expect = 7.8
Identities = 15/50 (30%), Positives = 18/50 (36%)
Frame = +1
Query: 667 GRRXXXXGGGRTXPAXXXNXGXXXDPPXPPXTNPPXXXGXXXRXGPATPP 816
G R G R+ P+ G +P P P G R GP PP
Sbjct: 192 GGRPGQAGQTRSAPSPPGQPGQPGEPGSPGEPGPDGRAGHPGRNGPPGPP 241
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical protein
C56A3.1 protein.
Length = 393
Score = 29.1 bits (62), Expect = 7.8
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = -2
Query: 1385 GCXGGGXVVXXGGXXXSGSGXXGRGGXRG 1299
GC GGG GG G G G GG G
Sbjct: 101 GCGGGGGCGGGGGGGCGGGGGGGCGGGGG 129
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.314 0.141 0.479
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,251,480
Number of Sequences: 27780
Number of extensions: 296763
Number of successful extensions: 3409
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2709
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3923317606
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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