Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_F01
         (1377 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY225516-1|AAO74853.1|  153|Homo sapiens acetylcholinesterase me...    26   4.8  
AY225517-1|AAO74854.1|  124|Homo sapiens acetylcholinesterase me...    26   5.0  
AL078621-10|CAB81647.1|  232|Homo sapiens protein ( G islands.  ...    26   7.7  
AB005297-1|BAA23647.1| 1584|Homo sapiens BAI 1 protein.                31   9.8  

>AY225516-1|AAO74853.1|  153|Homo sapiens acetylcholinesterase
          membrane anchor precursor PRiMA variant I protein.
          Length = 153

 Score = 25.8 bits (54), Expect(2) = 4.8
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 5  PPPPXPXPPP 34
          PPPP P PPP
Sbjct: 56 PPPPLPPPPP 65



 Score = 25.0 bits (52), Expect(2) = 4.8
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +2

Query: 8   PPPXPXPPPXXXXXXXPPN 64
           PPP P PPP        PN
Sbjct: 61  PPPPPPPPPPRLLSAPAPN 79


>AY225517-1|AAO74854.1|  124|Homo sapiens acetylcholinesterase
          membrane anchor precursor PRiMA variant II protein.
          Length = 124

 Score = 25.8 bits (54), Expect(2) = 5.0
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 5  PPPPXPXPPP 34
          PPPP P PPP
Sbjct: 56 PPPPLPPPPP 65



 Score = 25.0 bits (52), Expect(2) = 5.0
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +2

Query: 8   PPPXPXPPPXXXXXXXPPN 64
           PPP P PPP        PN
Sbjct: 61  PPPPPPPPPPRLLSAPAPN 79


>AL078621-10|CAB81647.1|  232|Homo sapiens protein ( G islands.
           ).).
          Length = 232

 Score = 25.8 bits (54), Expect(2) = 7.7
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +2

Query: 5   PPPPXPXPPP 34
           PPPP P PPP
Sbjct: 166 PPPPSPLPPP 175



 Score = 24.2 bits (50), Expect(2) = 7.7
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +2

Query: 8   PPPXPXPPPXXXXXXXPPNG 67
           PPP P PPP        P G
Sbjct: 173 PPPPPPPPPTPSSTTKLPQG 192


>AB005297-1|BAA23647.1| 1584|Homo sapiens BAI 1 protein.
          Length = 1584

 Score = 31.1 bits (67), Expect = 9.8
 Identities = 11/20 (55%), Positives = 11/20 (55%)
 Frame = +2

Query: 5    PPPPXPXPPPXXXXXXXPPN 64
            PPPP P PPP       PPN
Sbjct: 1412 PPPPPPPPPPPQQPLPPPPN 1431


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,646,580
Number of Sequences: 237096
Number of extensions: 1333052
Number of successful extensions: 9550
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2711
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7750
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 20005333910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)