Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_E22
(874 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y13582-1|CAA73909.1| 448|Homo sapiens TAP-associated protein, T... 34 0.77
BX248088-3|CAM25703.1| 504|Homo sapiens TAP binding protein (ta... 34 0.77
BX248088-2|CAI41784.1| 448|Homo sapiens TAP binding protein (ta... 34 0.77
BX248088-1|CAM25702.1| 466|Homo sapiens TAP binding protein (ta... 34 0.77
BC080574-1|AAH80574.1| 504|Homo sapiens TAPBP protein protein. 34 0.77
AL662827-10|CAM24888.1| 504|Homo sapiens TAP binding protein (t... 34 0.77
AL662827-9|CAI17523.1| 448|Homo sapiens TAP binding protein (ta... 34 0.77
AL662827-8|CAM24887.1| 466|Homo sapiens TAP binding protein (ta... 34 0.77
AL662820-10|CAM25472.1| 504|Homo sapiens TAP binding protein (t... 34 0.77
AL662820-9|CAI18120.1| 448|Homo sapiens TAP binding protein (ta... 34 0.77
AL662820-8|CAM25471.1| 466|Homo sapiens TAP binding protein (ta... 34 0.77
AF314222-1|AAG33061.1| 412|Homo sapiens tapasin protein. 34 0.77
AF029750-1|AAB82949.1| 448|Homo sapiens tapasin protein. 34 0.77
AF009510-1|AAC20076.1| 448|Homo sapiens tapasin protein. 34 0.77
AB010639-1|BAA28757.1| 448|Homo sapiens Tapasin*02 protein. 34 0.77
>Y13582-1|CAA73909.1| 448|Homo sapiens TAP-associated protein,
TAP-A protein.
Length = 448
Score = 33.9 bits (74), Expect = 0.77
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 370 PVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGG 212
P ++S P TL+RA+P EL+ +V P G V E +L+GGPGG
Sbjct: 291 PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEV-----EWELRGGPGG 338
>BX248088-3|CAM25703.1| 504|Homo sapiens TAP binding protein
(tapasin) protein.
Length = 504
Score = 33.9 bits (74), Expect = 0.77
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 370 PVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGG 212
P ++S P TL+RA+P EL+ +V P G V E +L+GGPGG
Sbjct: 291 PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEV-----EWELRGGPGG 338
>BX248088-2|CAI41784.1| 448|Homo sapiens TAP binding protein
(tapasin) protein.
Length = 448
Score = 33.9 bits (74), Expect = 0.77
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 370 PVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGG 212
P ++S P TL+RA+P EL+ +V P G V E +L+GGPGG
Sbjct: 291 PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEV-----EWELRGGPGG 338
>BX248088-1|CAM25702.1| 466|Homo sapiens TAP binding protein
(tapasin) protein.
Length = 466
Score = 33.9 bits (74), Expect = 0.77
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 370 PVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGG 212
P ++S P TL+RA+P EL+ +V P G V E +L+GGPGG
Sbjct: 309 PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEV-----EWELRGGPGG 356
>BC080574-1|AAH80574.1| 504|Homo sapiens TAPBP protein protein.
Length = 504
Score = 33.9 bits (74), Expect = 0.77
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 370 PVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGG 212
P ++S P TL+RA+P EL+ +V P G V E +L+GGPGG
Sbjct: 291 PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEV-----EWELRGGPGG 338
>AL662827-10|CAM24888.1| 504|Homo sapiens TAP binding protein
(tapasin) protein.
Length = 504
Score = 33.9 bits (74), Expect = 0.77
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 370 PVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGG 212
P ++S P TL+RA+P EL+ +V P G V E +L+GGPGG
Sbjct: 291 PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEV-----EWELRGGPGG 338
>AL662827-9|CAI17523.1| 448|Homo sapiens TAP binding protein
(tapasin) protein.
Length = 448
Score = 33.9 bits (74), Expect = 0.77
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 370 PVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGG 212
P ++S P TL+RA+P EL+ +V P G V E +L+GGPGG
Sbjct: 291 PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEV-----EWELRGGPGG 338
>AL662827-8|CAM24887.1| 466|Homo sapiens TAP binding protein
(tapasin) protein.
Length = 466
Score = 33.9 bits (74), Expect = 0.77
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 370 PVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGG 212
P ++S P TL+RA+P EL+ +V P G V E +L+GGPGG
Sbjct: 309 PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEV-----EWELRGGPGG 356
>AL662820-10|CAM25472.1| 504|Homo sapiens TAP binding protein
(tapasin) protein.
Length = 504
Score = 33.9 bits (74), Expect = 0.77
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 370 PVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGG 212
P ++S P TL+RA+P EL+ +V P G V E +L+GGPGG
Sbjct: 291 PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEV-----EWELRGGPGG 338
>AL662820-9|CAI18120.1| 448|Homo sapiens TAP binding protein
(tapasin) protein.
Length = 448
Score = 33.9 bits (74), Expect = 0.77
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 370 PVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGG 212
P ++S P TL+RA+P EL+ +V P G V E +L+GGPGG
Sbjct: 291 PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEV-----EWELRGGPGG 338
>AL662820-8|CAM25471.1| 466|Homo sapiens TAP binding protein
(tapasin) protein.
Length = 466
Score = 33.9 bits (74), Expect = 0.77
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 370 PVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGG 212
P ++S P TL+RA+P EL+ +V P G V E +L+GGPGG
Sbjct: 309 PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEV-----EWELRGGPGG 356
>AF314222-1|AAG33061.1| 412|Homo sapiens tapasin protein.
Length = 412
Score = 33.9 bits (74), Expect = 0.77
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 370 PVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGG 212
P ++S P TL+RA+P EL+ +V P G V E +L+GGPGG
Sbjct: 291 PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEV-----EWELRGGPGG 338
>AF029750-1|AAB82949.1| 448|Homo sapiens tapasin protein.
Length = 448
Score = 33.9 bits (74), Expect = 0.77
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 370 PVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGG 212
P ++S P TL+RA+P EL+ +V P G V E +L+GGPGG
Sbjct: 291 PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEV-----EWELRGGPGG 338
>AF009510-1|AAC20076.1| 448|Homo sapiens tapasin protein.
Length = 448
Score = 33.9 bits (74), Expect = 0.77
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 370 PVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGG 212
P ++S P TL+RA+P EL+ +V P G V E +L+GGPGG
Sbjct: 291 PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEV-----EWELRGGPGG 338
>AB010639-1|BAA28757.1| 448|Homo sapiens Tapasin*02 protein.
Length = 448
Score = 33.9 bits (74), Expect = 0.77
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 370 PVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGG 212
P ++S P TL+RA+P EL+ +V P G V E +L+GGPGG
Sbjct: 291 PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEV-----EWELRGGPGG 338
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,521,483
Number of Sequences: 237096
Number of extensions: 1871870
Number of successful extensions: 15704
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15701
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11104084400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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