Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_E19
(1054 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical pr... 35 0.085
AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid deplete... 34 0.15
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 33 0.34
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 33 0.34
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 33 0.34
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 33 0.34
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 33 0.45
AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical ... 33 0.45
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 31 1.4
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 31 1.4
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 31 1.8
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 31 1.8
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.4
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 30 2.4
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.4
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 30 3.2
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 30 3.2
Z48809-7|CAA88744.1| 367|Caenorhabditis elegans Hypothetical pr... 29 4.2
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 29 4.2
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 4.2
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 4.2
AF358857-1|AAK52772.1| 367|Caenorhabditis elegans REF-1 protein. 29 4.2
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 29 5.6
AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical ... 29 5.6
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 29 5.6
Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical pr... 29 7.3
Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical pr... 29 7.3
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 7.3
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 7.3
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 29 7.3
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 7.3
U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical pr... 28 9.7
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 28 9.7
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 28 9.7
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 28 9.7
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 28 9.7
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 28 9.7
AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical... 28 9.7
>U14635-1|AAC46657.2| 448|Caenorhabditis elegans Hypothetical
protein C27H5.3 protein.
Length = 448
Score = 35.1 bits (77), Expect = 0.085
Identities = 25/69 (36%), Positives = 26/69 (37%), Gaps = 1/69 (1%)
Frame = +3
Query: 675 GXXGXXXGXTAPXGXXRGXKGXAXXXXGGXRGRXGAGGXRXXXSGX-GG*RGGXRXXEXX 851
G G G P G RG G GG GR G G R G GG RGG R +
Sbjct: 300 GRGGFGGGRGGPMGG-RGGFGGDRGGYGGGGGRGGFDGGRGGGGGFRGGDRGGFRGGDRG 358
Query: 852 GXXXXXRXG 878
G R G
Sbjct: 359 GFRGGDRGG 367
>AF043700-5|AAB97575.2| 573|Caenorhabditis elegans Lipid depleted
protein 6 protein.
Length = 573
Score = 34.3 bits (75), Expect = 0.15
Identities = 22/56 (39%), Positives = 22/56 (39%), Gaps = 2/56 (3%)
Frame = +3
Query: 675 GXXGXXXGXTAPXGXXRGXKGXAXXXXGGXRGRXGAGGXRXXXSG--XGG*RGGXR 836
G G G RG G GG RGR G GG R G GG RGG R
Sbjct: 518 GRSGDRDGGFRGGFGGRGGGGFRGGDRGGFRGRGGGGGFRGGRGGDRGGGFRGGRR 573
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 33.1 bits (72), Expect = 0.34
Identities = 19/52 (36%), Positives = 19/52 (36%)
Frame = +3
Query: 675 GXXGXXXGXTAPXGXXRGXKGXAXXXXGGXRGRXGAGGXRXXXSGXGG*RGG 830
G G G G G G GG GR G GG G GG RGG
Sbjct: 79 GNWGGNGGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGG 130
Score = 32.3 bits (70), Expect = 0.60
Identities = 21/73 (28%), Positives = 24/73 (32%)
Frame = +1
Query: 661 GXSXXGGXXQXXXXRRXGAXXGAXKXXXXXXXGGGAXXXGRGEXGXXXVXXGGKGGXXXX 840
G GG G+ G + GGG G G G GG GG
Sbjct: 44 GRPGWGGGGPGWGRGGGGSGWGGGRGGGWGNNGGGGNWGGNGGGGNGGGGRGG-GGGGGG 102
Query: 841 GKXXGXXGXXGGG 879
G+ G G GGG
Sbjct: 103 GRGGGGGGRGGGG 115
Score = 29.9 bits (64), Expect = 3.2
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = +1
Query: 757 GGGAXXXGRGEXGXXXVXXGGKGGXXXXGKXXGXXGXXGGG 879
GGG GRG G GG GG G+ G G GGG
Sbjct: 96 GGGGGGGGRGGGGGGRGGGGGGGG----GRGGGGGGRGGGG 132
Score = 29.5 bits (63), Expect = 4.2
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +1
Query: 757 GGGAXXXGRGEXGXXXVXXGGKGGXXXXGKXXGXXGXXGGG 879
GGG GRG G GG GG G G GGG
Sbjct: 86 GGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGG 126
Score = 29.1 bits (62), Expect = 5.6
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +1
Query: 757 GGGAXXXGRGEXGXXXVXXGGKGGXXXXGKXXGXXGXXGGG 879
GGG G G G GG+GG G G G GG
Sbjct: 90 GGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRGG 130
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.1 bits (72), Expect = 0.34
Identities = 21/73 (28%), Positives = 22/73 (30%)
Frame = -3
Query: 878 PPPXXPXXPXXFPXXXXPPLPPXSTXXSPXSPRPXXXAPPPXXXXXXXFXAPXXAPXRRX 699
PPP P PP PP + SP PR PPP P R
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAA--GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 295
Query: 698 SXXXXXPPXXXXP 660
S PP P
Sbjct: 296 SPPPPPPPRGSPP 308
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.1 bits (72), Expect = 0.34
Identities = 21/73 (28%), Positives = 22/73 (30%)
Frame = -3
Query: 878 PPPXXPXXPXXFPXXXXPPLPPXSTXXSPXSPRPXXXAPPPXXXXXXXFXAPXXAPXRRX 699
PPP P PP PP + SP PR PPP P R
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAA--GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 316
Query: 698 SXXXXXPPXXXXP 660
S PP P
Sbjct: 317 SPPPPPPPRGSPP 329
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.1 bits (72), Expect = 0.34
Identities = 21/73 (28%), Positives = 22/73 (30%)
Frame = -3
Query: 878 PPPXXPXXPXXFPXXXXPPLPPXSTXXSPXSPRPXXXAPPPXXXXXXXFXAPXXAPXRRX 699
PPP P PP PP + SP PR PPP P R
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAA--GSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 301
Query: 698 SXXXXXPPXXXXP 660
S PP P
Sbjct: 302 SPPPPPPPRGSPP 314
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 32.7 bits (71), Expect = 0.45
Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
Frame = -3
Query: 893 QXXXXPPPXXPXXPXXFPXXXXPPLPPXSTXXSPXSPRP---XXXAPPP 756
Q PPP P P P PP P S +PRP APPP
Sbjct: 129 QQQPPPPPPPPHYPPPPPHYPPPPPAPHSAYIDHSAPRPAYIEHSAPPP 177
>AF125462-1|AAD12858.2| 244|Caenorhabditis elegans Hypothetical
protein Y66H1A.4 protein.
Length = 244
Score = 32.7 bits (71), Expect = 0.45
Identities = 20/48 (41%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Frame = +3
Query: 714 GXXRGXKGXAXXXXGGXRGRXGAGGXRXXX-SGXGG*RGGXRXXEXXG 854
G RG +G GG GR G GG R G GG RGG R + G
Sbjct: 161 GGDRGGRGSDRGGRGGF-GRGGGGGFRGGDRGGFGGGRGGFRGGDRGG 207
Score = 31.5 bits (68), Expect = 1.0
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = +1
Query: 757 GGGAXXXGRGEXGXXXVXXGGKGGXXXXGKXXGXXGXXGGG 879
GGG GRG G GG+GG G G G GGG
Sbjct: 9 GGGGFRGGRGGGGGGGFR-GGRGGDRGGGFRGGRGGFGGGG 48
Score = 29.1 bits (62), Expect = 5.6
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +3
Query: 756 GGXRGRXGAGGXRXXXSGXGG*RGGXRXXEXXGXXXXXRXG 878
GG RG G GG G GG RGG G R G
Sbjct: 11 GGFRGGRGGGGGGGFRGGRGGDRGGGFRGGRGGFGGGGRGG 51
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical protein
T07D4.3 protein.
Length = 1301
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +3
Query: 714 GXXRGXKGXAXXXXGGXRGRXGAGGXRXXXSGXGG*RGG 830
G +G G RG G GG R G GG RGG
Sbjct: 1253 GDWNAGRGNYGNVGSGYRGAGGGGGYRGGRGGRGGGRGG 1291
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.1 bits (67), Expect = 1.4
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = -3
Query: 878 PPPXXPXXPXXFPXXXXPPLPPXSTXXSPXSPRPXXXAPPP 756
PPP P P P PP P P P PPP
Sbjct: 32 PPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPP 72
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -2
Query: 867 PXXXPXPLPXXXXPPFTPXXHXXXXXFPPPPXXRAXPPXXPXXXLSXPSXRPXAP 703
P P P P P F P PPPP PP P S AP
Sbjct: 40 PPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMPSYSPCQSYAPAP 94
Score = 30.7 bits (66), Expect = 1.8
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -2
Query: 894 PGXXXXPXXPXXXPXPLPXXXXPPFTPXXHXXXXXFPPPPXXRAXPPXXPXXXLSXPSXR 715
P P P P PLP P P PPPP PP P PS
Sbjct: 27 PPPCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPP-PPPPMCPPPPPPMPSYS 85
Query: 714 P 712
P
Sbjct: 86 P 86
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 30.7 bits (66), Expect = 1.8
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +1
Query: 757 GGGAXXXGRGEXGXXXVXXGGKGGXXXXGKXXGXXGXXGGG 879
GGG G G G GG GG G G G GGG
Sbjct: 68 GGGGCGGGGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGG 108
Score = 30.7 bits (66), Expect = 1.8
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +1
Query: 757 GGGAXXXGRGEXGXXXVXXGGKGGXXXXGKXXGXXGXXGGG 879
GGG G G G GG GG G G G GGG
Sbjct: 145 GGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGGGGG 185
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 30.7 bits (66), Expect = 1.8
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +1
Query: 757 GGGAXXXGRGEXGXXXVXXGGKGGXXXXGKXXGXXGXXGGG 879
GGG G G G GG GG G G G GGG
Sbjct: 91 GGGGCGGGGGGCGGGGGCGGGGGGGCGGGGGGGCGGGGGGG 131
Score = 29.5 bits (63), Expect = 4.2
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +1
Query: 757 GGGAXXXGRGEXGXXXVXXGGKGGXXXXGKXXGXXGXXGGG 879
GGG G G G GG GG G G G GGG
Sbjct: 87 GGGCGGGGCGGGGGGCGGGGGCGGGGGGGCGGGGGGGCGGG 127
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 30.7 bits (66), Expect = 1.8
Identities = 22/78 (28%), Positives = 22/78 (28%), Gaps = 2/78 (2%)
Frame = +1
Query: 715 AXXGAXKXXXXXXXGGGAXXXGRGEXGXXXVXXGGKGGXXXXGKXXGXXGXXG--GGXXX 888
A GA GGG G G G GG GG G G G G GG
Sbjct: 43 ASAGASAGGTGGGRGGGRGGSGGGRGGGSGGGRGGSGGAGAGGSGSGSGGWGGQDGGSSA 102
Query: 889 XWXSXXXXXXXEXXEGGW 942
GGW
Sbjct: 103 GGWGGSQGGSQGGSSGGW 120
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 30.7 bits (66), Expect = 1.8
Identities = 25/101 (24%), Positives = 25/101 (24%), Gaps = 2/101 (1%)
Frame = +1
Query: 757 GGGAXXXGRGEXGXXXVXXGGKGGXXXXGKXXGXXGXXG--GGXXXXWXSXXXXXXXEXX 930
GGG G G G GG G G G G G GG W
Sbjct: 41 GGGGGPGGWGNNGGGGWGRGGGRGGGDWGGNNGGGGNWGGNGGGRGDWGGNGGGGRGGGG 100
Query: 931 EGGWXXRXXGXGXPKKHSRXIGXXWGXXXSXSSXLSRGGXR 1053
G W G G WG GG R
Sbjct: 101 RGDWGGNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGR 141
Score = 29.9 bits (64), Expect = 3.2
Identities = 20/73 (27%), Positives = 21/73 (28%)
Frame = +1
Query: 661 GXSXXGGXXQXXXXRRXGAXXGAXKXXXXXXXGGGAXXXGRGEXGXXXVXXGGKGGXXXX 840
G + GG G G GGG GRG G G G
Sbjct: 106 GNNNGGGGNWGGGGNNDGGWGGNNGGGGGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGR 165
Query: 841 GKXXGXXGXXGGG 879
G G G GGG
Sbjct: 166 GGGGGRGGGGGGG 178
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -3
Query: 878 PPPXXPXXPXXFPXXXXPPLPPXSTXXSPXSPRPXXXAPPP 756
P P P P PP PP S P SP P PPP
Sbjct: 74 PRPSPSCCPYVPPAPLPPPPPPASPCCGP-SPVPAPCCPPP 113
Score = 28.7 bits (61), Expect = 7.3
Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Frame = -3
Query: 878 PPPXXPXXPXXFPXXXXPPL-PPXSTXXSPXSPRPXXXAPPP 756
PPP P P P P PP +P P P P P
Sbjct: 90 PPPPPPASPCCGPSPVPAPCCPPPPAPAAPCCPPPPPPTPSP 131
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 30.3 bits (65), Expect = 2.4
Identities = 19/55 (34%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Frame = +2
Query: 716 RXEGXERXXXGXXGGXARX-XGGGGXQXXXKWXXGVKGGXXXXGXGXGXXXGXXG 877
R G R G GG +R GGGG G +GG G G G G G
Sbjct: 4 RGYGGSRSYGGSSGGGSRGGYGGGGRGGGGGGYSGGRGGGYGGGGGGGYGGGGYG 58
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.4
Identities = 21/73 (28%), Positives = 21/73 (28%)
Frame = +1
Query: 661 GXSXXGGXXQXXXXRRXGAXXGAXKXXXXXXXGGGAXXXGRGEXGXXXVXXGGKGGXXXX 840
G GG G G GGG G G G GG GG
Sbjct: 94 GGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSG 153
Query: 841 GKXXGXXGXXGGG 879
G G G GGG
Sbjct: 154 GCGGGGGGGCGGG 166
Score = 28.7 bits (61), Expect = 7.3
Identities = 20/73 (27%), Positives = 20/73 (27%)
Frame = +1
Query: 661 GXSXXGGXXQXXXXRRXGAXXGAXKXXXXXXXGGGAXXXGRGEXGXXXVXXGGKGGXXXX 840
G GG G G GGG G G GG GG
Sbjct: 102 GCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGG 161
Query: 841 GKXXGXXGXXGGG 879
G G G GGG
Sbjct: 162 GCGGGGGGGCGGG 174
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.4
Identities = 21/73 (28%), Positives = 21/73 (28%)
Frame = +1
Query: 661 GXSXXGGXXQXXXXRRXGAXXGAXKXXXXXXXGGGAXXXGRGEXGXXXVXXGGKGGXXXX 840
G GG G G GGG G G G GG GG
Sbjct: 94 GGGCGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSG 153
Query: 841 GKXXGXXGXXGGG 879
G G G GGG
Sbjct: 154 GCGGGGGGGCGGG 166
Score = 28.7 bits (61), Expect = 7.3
Identities = 20/73 (27%), Positives = 20/73 (27%)
Frame = +1
Query: 661 GXSXXGGXXQXXXXRRXGAXXGAXKXXXXXXXGGGAXXXGRGEXGXXXVXXGGKGGXXXX 840
G GG G G GGG G G GG GG
Sbjct: 102 GCGGGGGGCGGGGGGCGGGGGGCGGGGGGCGGGGGGGCGGGSSGGCGGGSSGGCGGGGGG 161
Query: 841 GKXXGXXGXXGGG 879
G G G GGG
Sbjct: 162 GCGGGGGGGCGGG 174
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = -3
Query: 878 PPPXXPXXPXXFPXXXXPPLPPXSTXXSPXSPRPXXXAPPP 756
PPP P P P PP P T SP RP P P
Sbjct: 139 PPPPPPRVPRTPPPRSPPPRRPPMTPPSP-QRRPPRTPPSP 178
Score = 29.1 bits (62), Expect = 5.6
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = -3
Query: 878 PPPXXPXXPXXFPXXXXPPLPPXSTXXSPXSPRPXXXAPPP 756
PPP P P P PP +P P PPP
Sbjct: 155 PPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPP 195
Score = 28.7 bits (61), Expect = 7.3
Identities = 16/60 (26%), Positives = 17/60 (28%)
Frame = -2
Query: 894 PGXXXXPXXPXXXPXPLPXXXXPPFTPXXHXXXXXFPPPPXXRAXPPXXPXXXLSXPSXR 715
P P P P P PP TP PP PP P + P R
Sbjct: 138 PPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPPR 197
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/56 (28%), Positives = 17/56 (30%)
Frame = -3
Query: 878 PPPXXPXXPXXFPXXXXPPLPPXSTXXSPXSPRPXXXAPPPXXXXXXXFXAPXXAP 711
PPP P P PP PP T + P PPP P P
Sbjct: 1340 PPPPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPP 1395
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.9 bits (64), Expect = 3.2
Identities = 19/72 (26%), Positives = 21/72 (29%)
Frame = -2
Query: 894 PGXXXXPXXPXXXPXPLPXXXXPPFTPXXHXXXXXFPPPPXXRAXPPXXPXXXLSXPSXR 715
P P P P P+P P P F PPP PP P P
Sbjct: 31 PTPMCQPRMPCAAPMPMPMPM--PVCPPPPPCPAQFCPPPPICPPPPPPPMPCPPPPPPM 88
Query: 714 PXAPXXXXLXRP 679
P + RP
Sbjct: 89 PRPSCPCMMQRP 100
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.9 bits (64), Expect = 3.2
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = -3
Query: 827 PPLPPXSTXXSPXSPRPXXXAPPP 756
PPLPP +T S P P PPP
Sbjct: 500 PPLPPIATPSSVPPPPPPPPPPPP 523
>Z48809-7|CAA88744.1| 367|Caenorhabditis elegans Hypothetical
protein T01E8.2 protein.
Length = 367
Score = 29.5 bits (63), Expect = 4.2
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = -3
Query: 878 PPPXXPXXPXX-FPXXXXPPLPPXSTXXSPXSPRPXXXAPPP 756
PPP P P FP P P ++ S SP +PPP
Sbjct: 290 PPPSFPIFPFRPFPFFPMPMAPMATSPKSQQSPSYSLDSPPP 331
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical
protein C50F7.5 protein.
Length = 309
Score = 29.5 bits (63), Expect = 4.2
Identities = 17/66 (25%), Positives = 18/66 (27%)
Frame = -2
Query: 876 PXXPXXXPXPLPXXXXPPFTPXXHXXXXXFPPPPXXRAXPPXXPXXXLSXPSXRPXAPXX 697
P P P P P P P PP P P P+ RP P
Sbjct: 214 PVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPG 273
Query: 696 XXLXRP 679
RP
Sbjct: 274 PPTRRP 279
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = -3
Query: 878 PPPXXPXXPXXFPXXXXPPLPPXSTXXSPXSPRPXXXAPPP 756
PPP P PLPP S+ S P PPP
Sbjct: 270 PPPRIASKTSVAPTSSRAPLPPSSSFAPSISASPAPAPPPP 310
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 29.5 bits (63), Expect = 4.2
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = -3
Query: 878 PPPXXPXXPXXFPXXXXPPLPPXSTXXSPXSPRPXXXAPPP 756
PPP P PLPP S+ S P PPP
Sbjct: 272 PPPRIASKTSVAPTSSRAPLPPSSSFAPSISASPAPAPPPP 312
>AF358857-1|AAK52772.1| 367|Caenorhabditis elegans REF-1 protein.
Length = 367
Score = 29.5 bits (63), Expect = 4.2
Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = -3
Query: 878 PPPXXPXXPXX-FPXXXXPPLPPXSTXXSPXSPRPXXXAPPP 756
PPP P P FP P P ++ S SP +PPP
Sbjct: 290 PPPSFPIFPFRPFPFFPMPMAPMATSPKSQQSPSYSLDSPPP 331
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 29.1 bits (62), Expect = 5.6
Identities = 17/41 (41%), Positives = 17/41 (41%)
Frame = +1
Query: 757 GGGAXXXGRGEXGXXXVXXGGKGGXXXXGKXXGXXGXXGGG 879
GGG GRG G GG GG G G G GGG
Sbjct: 11 GGGGFRGGRG--GDRGGSRGGFGGGGRGGYGGGDRGSFGGG 49
>AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical
protein Y48B6A.6b protein.
Length = 533
Score = 29.1 bits (62), Expect = 5.6
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = -3
Query: 878 PPPXXPXXPXXFPXXXXPPLPPXSTXXSPXSPRPXXXAPP 759
PPP P P P +P SP SPRP PP
Sbjct: 256 PPPVLSIPPPPPPNIPLPTIP--QEVQSPPSPRPTSVPPP 293
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 29.1 bits (62), Expect = 5.6
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = -3
Query: 878 PPPXXPXXPXXFPXXXXPPLPPXSTXXSPXSPRPXXXAPP 759
PPP P P P +P SP SPRP PP
Sbjct: 256 PPPVLSIPPPPPPNIPLPTIP--QEVQSPPSPRPTSVPPP 293
>Z83114-7|CAJ76943.1| 525|Caenorhabditis elegans Hypothetical
protein K09B11.5b protein.
Length = 525
Score = 28.7 bits (61), Expect = 7.3
Identities = 18/68 (26%), Positives = 21/68 (30%)
Frame = -1
Query: 937 PLPPXHXXTXXXXXSRXXXXPXLSXXXXPXXSXXRXPPLYPPXPLXXXLXPPAPXRPRXP 758
P PP H T + P +S + P PP PP P P P
Sbjct: 457 PSPPSH--TAKSHTVKSPMTPPVSQPPVSQPPVSQPPVSQPPVSQPPVSQPPVPQHPMTP 514
Query: 757 PXXXXAXP 734
P A P
Sbjct: 515 PPASSARP 522
>Z83114-6|CAB63235.1| 589|Caenorhabditis elegans Hypothetical
protein K09B11.5a protein.
Length = 589
Score = 28.7 bits (61), Expect = 7.3
Identities = 18/68 (26%), Positives = 21/68 (30%)
Frame = -1
Query: 937 PLPPXHXXTXXXXXSRXXXXPXLSXXXXPXXSXXRXPPLYPPXPLXXXLXPPAPXRPRXP 758
P PP H T + P +S + P PP PP P P P
Sbjct: 521 PSPPSH--TAKSHTVKSPMTPPVSQPPVSQPPVSQPPVSQPPVSQPPVSQPPVPQHPMTP 578
Query: 757 PXXXXAXP 734
P A P
Sbjct: 579 PPASSARP 586
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 7.3
Identities = 20/71 (28%), Positives = 22/71 (30%), Gaps = 3/71 (4%)
Frame = -1
Query: 877 PXLSXXXXPXXSXXRXPPLYPPXPLXXXLXPPAPXRPRXPPXXXXAXP---FXPLXXPXG 707
P ++ P S PP PP P P P P PP P P P G
Sbjct: 281 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG 340
Query: 706 AVXPXXXPXXP 674
P P P
Sbjct: 341 MRYPGGMPPPP 351
Score = 28.7 bits (61), Expect = 7.3
Identities = 21/68 (30%), Positives = 21/68 (30%), Gaps = 4/68 (5%)
Frame = -2
Query: 894 PGXXXXPXXPXXXPX----PLPXXXXPPFTPXXHXXXXXFPPPPXXRAXPPXXPXXXLSX 727
PG P P P P PP P PPPP R P P
Sbjct: 308 PGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPR-YPSAGPGMYPPP 366
Query: 726 PSXRPXAP 703
P RP AP
Sbjct: 367 PPSRPPAP 374
Score = 28.3 bits (60), Expect = 9.7
Identities = 17/57 (29%), Positives = 19/57 (33%), Gaps = 5/57 (8%)
Frame = -1
Query: 829 PPLYPPXPLXXXLXPPAPXRP-----RXPPXXXXAXPFXPLXXPXGAVXPXXXPXXP 674
PP+ PP P + PP P P PP P P P P P P
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMP 317
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -3
Query: 875 PPXXPXXPXXFPXXXXPPLPPXSTXXSPXSPRPXXXAPPP 756
PP P P P PP PP S P P P P P
Sbjct: 274 PPPMPPTPGMTPR---PPPPPSSGMWPPPPPPPPGRTPGP 310
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 7.3
Identities = 20/71 (28%), Positives = 22/71 (30%), Gaps = 3/71 (4%)
Frame = -1
Query: 877 PXLSXXXXPXXSXXRXPPLYPPXPLXXXLXPPAPXRPRXPPXXXXAXP---FXPLXXPXG 707
P ++ P S PP PP P P P P PP P P P G
Sbjct: 291 PGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPG 350
Query: 706 AVXPXXXPXXP 674
P P P
Sbjct: 351 MRYPGGMPPPP 361
Score = 28.7 bits (61), Expect = 7.3
Identities = 21/68 (30%), Positives = 21/68 (30%), Gaps = 4/68 (5%)
Frame = -2
Query: 894 PGXXXXPXXPXXXPX----PLPXXXXPPFTPXXHXXXXXFPPPPXXRAXPPXXPXXXLSX 727
PG P P P P PP P PPPP R P P
Sbjct: 318 PGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPR-YPSAGPGMYPPP 376
Query: 726 PSXRPXAP 703
P RP AP
Sbjct: 377 PPSRPPAP 384
Score = 28.3 bits (60), Expect = 9.7
Identities = 17/57 (29%), Positives = 19/57 (33%), Gaps = 5/57 (8%)
Frame = -1
Query: 829 PPLYPPXPLXXXLXPPAPXRP-----RXPPXXXXAXPFXPLXXPXGAVXPXXXPXXP 674
PP+ PP P + PP P P PP P P P P P P
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMP 327
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -3
Query: 875 PPXXPXXPXXFPXXXXPPLPPXSTXXSPXSPRPXXXAPPP 756
PP P P P PP PP S P P P P P
Sbjct: 284 PPPMPPTPGMTPR---PPPPPSSGMWPPPPPPPPGRTPGP 320
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 28.7 bits (61), Expect = 7.3
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -1
Query: 829 PPLYPPXPLXXXLXPPAPXRPRXPPXXXXAXPFXPL 722
PP PP PL L P P PP A P P+
Sbjct: 68 PPPPPPPPLISILQQAPPPPPPPPPPTLKAPPPPPI 103
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 7.3
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = -3
Query: 878 PPPXXPXXPXXFPXXXXPPLPPXSTXXSPXSPRP 777
PPP P P PP PP P P P
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPP 594
>U80023-1|AAG24037.1| 180|Caenorhabditis elegans Hypothetical
protein F07C4.7 protein.
Length = 180
Score = 28.3 bits (60), Expect = 9.7
Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 1/55 (1%)
Frame = +3
Query: 675 GXXGXXXGXTAPXGXXRGXKGXAXXXXGGXRGR-XGAGGXRXXXSGXGG*RGGXR 836
G G G P G G GG G G GG GG RGG R
Sbjct: 28 GFGGPGSGGPGPRGPGEWNNGGGRGGFGGNNGWNNGGGGFNGNGGFNGGGRGGGR 82
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.3 bits (60), Expect = 9.7
Identities = 27/111 (24%), Positives = 32/111 (28%), Gaps = 3/111 (2%)
Frame = -2
Query: 1047 PPPTKXGXXAXXAAPXXSYXXTMLFXLXXPPXXXXPAPFXXLTAXLTXXTXP--GXXXXP 874
PPPTK A + S + PP P P G P
Sbjct: 686 PPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPP 745
Query: 873 XXPXXXPXPLPXXXXPPFTPXXHXXXXXFPPPPXX-RAXPPXXPXXXLSXP 724
P P P+ PP P PPPP + PP P + P
Sbjct: 746 PPPGGLP-PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -3
Query: 875 PPXXPXXPXXFPXXXXPPLPPXSTXXSPXSPRPXXXAPPP 756
PP P P PP PP P S P PPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.3 bits (60), Expect = 9.7
Identities = 27/111 (24%), Positives = 32/111 (28%), Gaps = 3/111 (2%)
Frame = -2
Query: 1047 PPPTKXGXXAXXAAPXXSYXXTMLFXLXXPPXXXXPAPFXXLTAXLTXXTXP--GXXXXP 874
PPPTK A + S + PP P P G P
Sbjct: 686 PPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPP 745
Query: 873 XXPXXXPXPLPXXXXPPFTPXXHXXXXXFPPPPXX-RAXPPXXPXXXLSXP 724
P P P+ PP P PPPP + PP P + P
Sbjct: 746 PPPGGLP-PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 795
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -3
Query: 875 PPXXPXXPXXFPXXXXPPLPPXSTXXSPXSPRPXXXAPPP 756
PP P P PP PP P S P PPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +1
Query: 757 GGGAXXXGRGEXGXXXVXXGGKGGXXXXGKXXGXXGXXGGG 879
GGG G G G GG GG G G GGG
Sbjct: 55 GGGGGGGGGGGFGGGNGGFGGGGGGNYGGGGGNQGGGGGGG 95
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 28.3 bits (60), Expect = 9.7
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = +1
Query: 757 GGGAXXXGRGEXGXXXVXXGGKGGXXXXGKXXGXXGXXGGG 879
GGG G G G GG GG G G GGG
Sbjct: 62 GGGGFGGGNGGFGGGGGGSGGGGGGNNIGSLVGSLIGGGGG 102
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.3 bits (60), Expect = 9.7
Identities = 27/111 (24%), Positives = 32/111 (28%), Gaps = 3/111 (2%)
Frame = -2
Query: 1047 PPPTKXGXXAXXAAPXXSYXXTMLFXLXXPPXXXXPAPFXXLTAXLTXXTXP--GXXXXP 874
PPPTK A + S + PP P P G P
Sbjct: 269 PPPTKMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPP 328
Query: 873 XXPXXXPXPLPXXXXPPFTPXXHXXXXXFPPPPXX-RAXPPXXPXXXLSXP 724
P P P+ PP P PPPP + PP P + P
Sbjct: 329 PPPGGLP-PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAP 378
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = -3
Query: 875 PPXXPXXPXXFPXXXXPPLPPXSTXXSPXSPRPXXXAPPP 756
PP P P PP PP P S P PPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 348
>AF047659-10|AAC04430.1| 798|Caenorhabditis elegans Hypothetical
protein K07H8.10 protein.
Length = 798
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 756 GGXRGRXGAGGXRXXXSGXGG*RGGXRXXEXXG 854
GG RG G G G GG RGG R G
Sbjct: 12 GGFRGGRGGGSGFTPRGGGGGFRGGDRGRSPGG 44
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,858,182
Number of Sequences: 27780
Number of extensions: 141392
Number of successful extensions: 1398
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 449
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 976
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2803879784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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