Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_E10
         (948 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_03_0040 + 11816056-11819069,11819837-11820428                       30   3.1  
06_03_0189 - 17697779-17698939                                         30   3.1  
03_01_0092 - 731069-731434,731569-733080                               29   4.1  
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969...    24   6.1  
03_05_0067 - 20460206-20460703,20461255-20461530                       29   7.1  
02_05_0925 - 32768815-32769654                                         29   7.1  
03_03_0038 + 13984525-13984917,13985351-13985429,13985535-139856...    28   9.4  
01_05_0798 - 25322213-25322333,25322536-25322816                       28   9.4  

>09_03_0040 + 11816056-11819069,11819837-11820428
          Length = 1201

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 11/15 (73%), Positives = 11/15 (73%)
 Frame = +2

Query: 533 PLAGRFSHKPPPPPT 577
           PL GRF   PPPPPT
Sbjct: 39  PLCGRFPAPPPPPPT 53


>06_03_0189 - 17697779-17698939
          Length = 386

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +2

Query: 518 PVKKAPLAGRFSHKPPPPP 574
           P+ +  LAG   HKPPPPP
Sbjct: 277 PLHRNSLAGTTRHKPPPPP 295


>03_01_0092 - 731069-731434,731569-733080
          Length = 625

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +2

Query: 518 PVKKAPLAGRFSHKPPPPPTNHXQKSXPQV 607
           P++  P+A   S  PPPPP +H Q++ P +
Sbjct: 237 PLQPTPVA---SAAPPPPPQHHHQQTPPPI 263


>01_06_1678 -
           39095986-39096205,39096400-39096477,39096578-39096949,
           39097374-39097671,39097867-39098077,39098331-39099023
          Length = 623

 Score = 24.2 bits (50), Expect(2) = 6.1
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 518 PVKKAPLAGRFSHKPPPPP 574
           P   +P+     H PPPPP
Sbjct: 70  PPTPSPVPEHLHHHPPPPP 88



 Score = 23.0 bits (47), Expect(2) = 6.1
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 557 KPPPPPTNHXQKSXP 601
           +PPPPP  H  +  P
Sbjct: 118 RPPPPPPPHPPEDPP 132


>03_05_0067 - 20460206-20460703,20461255-20461530
          Length = 257

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = +2

Query: 548 FSHKPPPPPTNHXQKSXPQVXRWXNP 625
           F   PPPPP  + Q + P    W  P
Sbjct: 21  FQAGPPPPPPQYFQGAHPPAAMWGQP 46


>02_05_0925 - 32768815-32769654
          Length = 279

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +2

Query: 536 LAGRFSHKPPPPP 574
           + GRF H PPPPP
Sbjct: 148 IGGRFDHHPPPPP 160


>03_03_0038 +
           13984525-13984917,13985351-13985429,13985535-13985628,
           13985712-13985844
          Length = 232

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 17/62 (27%), Positives = 27/62 (43%)
 Frame = +2

Query: 446 PQKSGG*XQEKNM*XKXASQXXXKPVKKAPLAGRFSHKPPPPPTNHXQKSXPQVXRWXNP 625
           PQ  GG  ++K       +    + +++  +  R   KPPPPP    Q+   +V RW   
Sbjct: 44  PQLRGGETKKKKKPDARTAAEAAQGLQRHEVERR--KKPPPPPPPPKQEKAKRVVRWKCA 101

Query: 626 TG 631
            G
Sbjct: 102 AG 103


>01_05_0798 - 25322213-25322333,25322536-25322816
          Length = 133

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +2

Query: 518 PVKKAPLAGRFSHKPPPPPTNHXQKS 595
           P KKAPL       PPPPP N   +S
Sbjct: 19  PTKKAPLVA--PPPPPPPPNNQESES 42


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,634,621
Number of Sequences: 37544
Number of extensions: 293172
Number of successful extensions: 1506
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1464
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2729534420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)