Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_E10
         (948 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024136-3|AAF35959.2|  470|Caenorhabditis elegans Hypothetical ...    29   4.9  
AL021497-17|CAD56613.1|  138|Caenorhabditis elegans Hypothetical...    28   8.5  

>AC024136-3|AAF35959.2|  470|Caenorhabditis elegans Hypothetical
           protein F54A3.6 protein.
          Length = 470

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 15/43 (34%), Positives = 17/43 (39%)
 Frame = +2

Query: 503 QXXXKPVKKAPLAGRFSHKPPPPPTNHXQKSXPQVXRWXNPTG 631
           Q   KP    P AG F   PPP P +      P V  +  P G
Sbjct: 317 QVYGKPNPPPPSAGYFFQAPPPAPASSSSTVPPAVSPFGVPLG 359


>AL021497-17|CAD56613.1|  138|Caenorhabditis elegans Hypothetical
           protein Y51A2D.20 protein.
          Length = 138

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 518 PVKKAPLAGRFSHKPPPPPTN 580
           P++ +P+      +PPPPP N
Sbjct: 30  PIRNSPMTSSLRSRPPPPPYN 50


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,438,670
Number of Sequences: 27780
Number of extensions: 239026
Number of successful extensions: 752
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2454664212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)