Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_E09
         (898 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    32   0.54 
12_02_0332 + 17653413-17653581,17654045-17654139,17654292-176544...    30   2.9  
03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,597...    29   3.8  

>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 32.3 bits (70), Expect = 0.54
 Identities = 18/55 (32%), Positives = 18/55 (32%)
 Frame = +3

Query: 726 PLXLSXXXXPVPXXXGXGKXFPXP*XXPPXPRXKXXFCFXGAPXPXXPXPXNPXP 890
           P  L     P P   G G  FP P   PP PR         A     P P  P P
Sbjct: 642 PPSLPNRLVPPPPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPP 696


>12_02_0332 +
           17653413-17653581,17654045-17654139,17654292-17654444,
           17655013-17655117,17655197-17655268,17655514-17655626,
           17655727-17655861,17655970-17656038,17656154-17656241,
           17656348-17656419,17656505-17656605,17656724-17656841,
           17656933-17656992,17657593-17657703,17659044-17659154
          Length = 523

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 10/30 (33%), Positives = 23/30 (76%)
 Frame = -2

Query: 105 RISFLYDHELSQAKILKLCQNLKEFPIVSW 16
           ++++L +H+L +++ LKLC+ + E+ I +W
Sbjct: 51  KLAYLIEHDLDRSEFLKLCKKI-EYTIRAW 79


>03_02_0155 -
           5974118-5974173,5974242-5974314,5974393-5974500,
           5975189-5976914,5977065-5977620,5978008-5978485
          Length = 998

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/36 (36%), Positives = 15/36 (41%)
 Frame = +3

Query: 786 FPXP*XXPPXPRXKXXFCFXGAPXPXXPXPXNPXPP 893
           +P P   PP P     F    A  P  P P +P PP
Sbjct: 63  YPMPGSLPPPPPRPPSFAPENALPPSSPPPPSPPPP 98


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,500,311
Number of Sequences: 37544
Number of extensions: 430857
Number of successful extensions: 998
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)