Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_E09
         (898 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF043724-1|AAC39862.1|  359|Homo sapiens hepatitis A virus cellu...    31   5.7  
M57417-1|AAA63229.2|  294|Homo sapiens mucin protein.                  30   9.9  

>AF043724-1|AAC39862.1|  359|Homo sapiens hepatitis A virus cellular
           receptor 1 protein.
          Length = 359

 Score = 31.1 bits (67), Expect = 5.7
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +2

Query: 188 TATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVP 304
           T    +TT RTS  +P TTT+  T    + ++  T TVP
Sbjct: 136 TTVPTVTTVRTSTTVPTTTTVPTTTVPTTMSIPTTTTVP 174


>M57417-1|AAA63229.2|  294|Homo sapiens mucin protein.
          Length = 294

 Score = 30.3 bits (65), Expect = 9.9
 Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
 Frame = +2

Query: 173 TPTQETATNLLTTARTSLILPKTT-TLMETATNLSTTVHITWT-VPKGRPYFKPTP 334
           T TQ   +  +TT  T    P  T T   T T ++TT  +T T  P G  Y  PTP
Sbjct: 135 TGTQTPTSTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTRYPTPTP 190


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,495,949
Number of Sequences: 237096
Number of extensions: 2545910
Number of successful extensions: 4718
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4688
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11548247776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)