Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_E08
         (840 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical pr...   226   2e-59
U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical pr...    36   0.036
Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical pr...    36   0.047
Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical pr...    36   0.047
U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical pr...    36   0.047
U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical pr...    36   0.047
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr...    29   4.1  
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int...    29   4.1  
AL033510-7|CAA22069.1|  124|Caenorhabditis elegans Hypothetical ...    29   5.4  
Z54235-7|CAA90974.3|  611|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical
           protein B0393.1 protein.
          Length = 276

 Score =  226 bits (552), Expect = 2e-59
 Identities = 108/191 (56%), Positives = 133/191 (69%)
 Frame = +1

Query: 106 MSGGLDVLALNEEDVTKMLAATTHLGAENVNFQMETYVYKRRADGTHVINLRRTWEKLVL 285
           MSGG    AL EEDV K+LA   HLG+ N+NFQM+ YVYKRR DG ++IN+++TWEKL+L
Sbjct: 1   MSGGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLL 60

Query: 286 AARAVVAIENPADVFVISSRPFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 465
           AARA+ A+ENPADV V+S+RP+ QRA+LKFAAHTGAT I GRF+PG  TNQIQ  F+EPR
Sbjct: 61  AARAIAAVENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFKEPR 120

Query: 466 LLIVLDPGTRPSTHY*SFICQHSCDCFVQHRLPTKICGHCYPCNTKSSHSIGLMWWLLAR 645
           LL++ DP         +         FV    P K+     PCN K   SIGLMWW+LAR
Sbjct: 121 LLVISDPRIDHQAVTEASYVGVPVISFVNTESPLKLIDIGVPCNNKGERSIGLMWWMLAR 180

Query: 646 EVLXLRGVLPR 678
           E+L LRG + R
Sbjct: 181 EILILRGKISR 191


>U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical
           protein C27A2.5 protein.
          Length = 188

 Score = 35.9 bits (79), Expect = 0.036
 Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
 Frame = +3

Query: 285 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 407
           GC CC    +   C R   T  R+ CCT  C   R C   CG
Sbjct: 82  GCGCCCCRPKCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123


>Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical
           protein R13H4.8 protein.
          Length = 212

 Score = 35.5 bits (78), Expect = 0.047
 Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
 Frame = +3

Query: 285 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 407
           GC CC        C R   T  R+ CCT  C   R C   CG
Sbjct: 83  GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124


>Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical
           protein T01B7.8 protein.
          Length = 164

 Score = 35.5 bits (78), Expect = 0.047
 Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
 Frame = +3

Query: 285 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 407
           GC CC        C R   T  R+ CCT  C   R C   CG
Sbjct: 81  GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 122


>U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical
           protein C04G6.10 protein.
          Length = 166

 Score = 35.5 bits (78), Expect = 0.047
 Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
 Frame = +3

Query: 285 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 407
           GC CC        C R   T  R+ CCT  C   R C   CG
Sbjct: 82  GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123


>U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical
           protein C04G6.7 protein.
          Length = 197

 Score = 35.5 bits (78), Expect = 0.047
 Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
 Frame = +3

Query: 285 GCSCCRSHREPR*CVRHLITALRSACCTEVCRAHR-CYAYCG 407
           GC CC        C R   T  R+ CCT  C   R C   CG
Sbjct: 83  GCGCCCCRPRCCCCCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124


>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical protein
            F57F4.4 protein.
          Length = 2090

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 19/61 (31%), Positives = 22/61 (36%)
 Frame = +3

Query: 546  CATQTPH*DLWTLLSMQHQVFPLYWFDXXXXXXXXXXASWCASP*PALGCCXLNLFLYRD 725
            C  Q     L T L+       LY  D           +WCASP P +  C  N  L  D
Sbjct: 1420 CQGQCASISLNTTLNGVATTATLYGCDPSTVCQSLNMNNWCASPIPGVSGCCCNTDLCLD 1479

Query: 726  P 728
            P
Sbjct: 1480 P 1480


>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
            interacting proteinprotein 1 protein.
          Length = 2153

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 19/61 (31%), Positives = 22/61 (36%)
 Frame = +3

Query: 546  CATQTPH*DLWTLLSMQHQVFPLYWFDXXXXXXXXXXASWCASP*PALGCCXLNLFLYRD 725
            C  Q     L T L+       LY  D           +WCASP P +  C  N  L  D
Sbjct: 1420 CQGQCASISLNTTLNGVATTATLYGCDPSTVCQSLNMNNWCASPIPGVSGCCCNTDLCLD 1479

Query: 726  P 728
            P
Sbjct: 1480 P 1480


>AL033510-7|CAA22069.1|  124|Caenorhabditis elegans Hypothetical
           protein Y40H7A.11 protein.
          Length = 124

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 1/24 (4%)
 Frame = +1

Query: 574 CGHCYPC-NTKSSHSIGLMWWLLA 642
           C  C     T+  H IG+MWWL A
Sbjct: 63  CTRCQTLVQTRVEHKIGIMWWLCA 86


>Z54235-7|CAA90974.3|  611|Caenorhabditis elegans Hypothetical
           protein C09G9.4 protein.
          Length = 611

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = -1

Query: 711 TNSTXNIPALVTGKHTTKXQHFTCQQP-PHQTNRVGRLGVAWIAMSTNLSGESVLH 547
           +NS  N+ AL++  H+    H TC    P+     GR+ V W      L G  +L+
Sbjct: 387 SNSRNNVHALISEVHSV---HITCSSLFPYS----GRISVVWSCEKLELDGAKILY 435


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,469,110
Number of Sequences: 27780
Number of extensions: 447105
Number of successful extensions: 1115
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1059
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1113
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)