Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_E04
         (853 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC047073-1|AAH47073.1|  540|Homo sapiens LMBR1 domain containing...    31   4.0  
AY136817-1|AAN11301.1|  467|Homo sapiens HDAg-L interacting prot...    31   4.0  
AL590702-4|CAI17316.1|  540|Homo sapiens RP11-810I22.1 protein.        31   4.0  
AL590702-3|CAI17314.1|  467|Homo sapiens RP11-810I22.1 protein.        31   4.0  
AL583831-2|CAH74083.1|  540|Homo sapiens RP11-810I22.1 protein.        31   4.0  
AL583831-1|CAH74081.1|  467|Homo sapiens RP11-810I22.1 protein.        31   4.0  
AL358133-2|CAI16836.1|  540|Homo sapiens RP11-810I22.1 protein.        31   4.0  
AL358133-1|CAI16835.1|  467|Homo sapiens RP11-810I22.1 protein.        31   4.0  
AK002102-1|BAA92087.1|  540|Homo sapiens protein ( Homo sapiens ...    31   4.0  

>BC047073-1|AAH47073.1|  540|Homo sapiens LMBR1 domain containing 1
           protein.
          Length = 540

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 476 IYSYYTIFLVVLYCFFLVILALFRYLPAMVEIXITKC 586
           +Y YYT++ V+L+C F  I  ++ Y     +   +KC
Sbjct: 98  LYGYYTLYSVILFCVFFWIPFVYFYYEEKDDDDTSKC 134


>AY136817-1|AAN11301.1|  467|Homo sapiens HDAg-L interacting protein
           NESI protein.
          Length = 467

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 476 IYSYYTIFLVVLYCFFLVILALFRYLPAMVEIXITKC 586
           +Y YYT++ V+L+C F  I  ++ Y     +   +KC
Sbjct: 25  LYGYYTLYSVILFCVFFWIPFVYFYYEEKDDDDTSKC 61


>AL590702-4|CAI17316.1|  540|Homo sapiens RP11-810I22.1 protein.
          Length = 540

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 476 IYSYYTIFLVVLYCFFLVILALFRYLPAMVEIXITKC 586
           +Y YYT++ V+L+C F  I  ++ Y     +   +KC
Sbjct: 98  LYGYYTLYSVILFCVFFWIPFVYFYYEEKDDDDTSKC 134


>AL590702-3|CAI17314.1|  467|Homo sapiens RP11-810I22.1 protein.
          Length = 467

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 476 IYSYYTIFLVVLYCFFLVILALFRYLPAMVEIXITKC 586
           +Y YYT++ V+L+C F  I  ++ Y     +   +KC
Sbjct: 25  LYGYYTLYSVILFCVFFWIPFVYFYYEEKDDDDTSKC 61


>AL583831-2|CAH74083.1|  540|Homo sapiens RP11-810I22.1 protein.
          Length = 540

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 476 IYSYYTIFLVVLYCFFLVILALFRYLPAMVEIXITKC 586
           +Y YYT++ V+L+C F  I  ++ Y     +   +KC
Sbjct: 98  LYGYYTLYSVILFCVFFWIPFVYFYYEEKDDDDTSKC 134


>AL583831-1|CAH74081.1|  467|Homo sapiens RP11-810I22.1 protein.
          Length = 467

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 476 IYSYYTIFLVVLYCFFLVILALFRYLPAMVEIXITKC 586
           +Y YYT++ V+L+C F  I  ++ Y     +   +KC
Sbjct: 25  LYGYYTLYSVILFCVFFWIPFVYFYYEEKDDDDTSKC 61


>AL358133-2|CAI16836.1|  540|Homo sapiens RP11-810I22.1 protein.
          Length = 540

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 476 IYSYYTIFLVVLYCFFLVILALFRYLPAMVEIXITKC 586
           +Y YYT++ V+L+C F  I  ++ Y     +   +KC
Sbjct: 98  LYGYYTLYSVILFCVFFWIPFVYFYYEEKDDDDTSKC 134


>AL358133-1|CAI16835.1|  467|Homo sapiens RP11-810I22.1 protein.
          Length = 467

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 476 IYSYYTIFLVVLYCFFLVILALFRYLPAMVEIXITKC 586
           +Y YYT++ V+L+C F  I  ++ Y     +   +KC
Sbjct: 25  LYGYYTLYSVILFCVFFWIPFVYFYYEEKDDDDTSKC 61


>AK002102-1|BAA92087.1|  540|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11240 fis, clone PLACE1008568. ).
          Length = 540

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = +2

Query: 476 IYSYYTIFLVVLYCFFLVILALFRYLPAMVEIXITKC 586
           +Y YYT++ V+L+C F  I  ++ Y     +   +KC
Sbjct: 98  LYGYYTLYSVILFCVFFWIPFVYFYYEEKDDDDTSKC 134


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,936,079
Number of Sequences: 237096
Number of extensions: 1888676
Number of successful extensions: 7153
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7153
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)