Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_E03
(867 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ420785-4|CAD12784.1| 395|Anopheles gambiae serpin protein. 54 4e-09
AJ420785-3|CAD12783.1| 380|Anopheles gambiae serpin protein. 54 4e-09
AJ420785-2|CAD12782.1| 382|Anopheles gambiae serpin protein. 54 4e-09
AJ420785-1|CAD12781.1| 379|Anopheles gambiae serpin protein. 54 4e-09
AY341219-1|AAR13783.1| 200|Anopheles gambiae SRPN10 protein. 53 1e-08
AY341217-1|AAR13781.1| 200|Anopheles gambiae SRPN10 protein. 53 1e-08
AY341216-1|AAR13780.1| 200|Anopheles gambiae SRPN10 protein. 53 1e-08
AY341215-1|AAR13779.1| 200|Anopheles gambiae SRPN10 protein. 53 1e-08
AY341218-1|AAR13782.1| 200|Anopheles gambiae SRPN10 protein. 53 1e-08
AJ271353-1|CAB69785.1| 380|Anopheles gambiae putative serine pr... 53 1e-08
AJ271352-1|CAB69784.1| 379|Anopheles gambiae putative serine pr... 53 1e-08
EF117200-1|ABL67437.1| 421|Anopheles gambiae serpin 1 protein. 32 0.020
DQ974169-1|ABJ52809.1| 508|Anopheles gambiae serpin 11 protein. 32 0.020
DQ974163-1|ABJ52803.1| 595|Anopheles gambiae serpin 4B protein. 31 0.034
DQ974173-1|ABJ52813.1| 553|Anopheles gambiae serpin 16 protein. 30 0.079
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 27 0.98
DQ974171-1|ABJ52811.1| 403|Anopheles gambiae serpin 14 protein. 24 5.2
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 24 5.2
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 24 6.9
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 24 6.9
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 23 9.1
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 23 9.1
AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2 pro... 23 9.1
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 23 9.1
>AJ420785-4|CAD12784.1| 395|Anopheles gambiae serpin protein.
Length = 395
Score = 54.4 bits (125), Expect = 4e-09
Identities = 55/172 (31%), Positives = 79/172 (45%), Gaps = 9/172 (5%)
Frame = +1
Query: 247 KNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGG---EAQESTHTYGLLNQRYAEFDP 417
+NV+ SP + LSL GAG + E++ +L G Q Y L +R A
Sbjct: 34 ENVVISPFSISACLSLAAMGAGGLTAEQMYSVLEFGAPDRKQTVADNYRRLMERLA--TD 91
Query: 418 KFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFSAPKNAR*YHQPLGGRXDSRTH 594
+ VANKIYV Y + AF+ A FRSE +++NF+ A + + G + +T+
Sbjct: 92 STVNVANKIYVMQNYAVKGAFNAIATGSFRSEAESVNFAESAAAA---KKINGWVEEKTN 148
Query: 595 ---KD--SWSAKTKLXPATXVANV*RHFLPGGTGTFRSTPSETEEKDFHVDE 735
KD S A +L V V HF GT T++ PS T F + E
Sbjct: 149 NKIKDLISPDALDELSRMVLVNAV--HF--KGTWTYQFDPSLTRPFPFWLSE 196
>AJ420785-3|CAD12783.1| 380|Anopheles gambiae serpin protein.
Length = 380
Score = 54.4 bits (125), Expect = 4e-09
Identities = 55/172 (31%), Positives = 79/172 (45%), Gaps = 9/172 (5%)
Frame = +1
Query: 247 KNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGG---EAQESTHTYGLLNQRYAEFDP 417
+NV+ SP + LSL GAG + E++ +L G Q Y L +R A
Sbjct: 34 ENVVISPFSISACLSLAAMGAGGLTAEQMYSVLEFGAPDRKQTVADNYRRLMERLA--TD 91
Query: 418 KFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFSAPKNAR*YHQPLGGRXDSRTH 594
+ VANKIYV Y + AF+ A FRSE +++NF+ A + + G + +T+
Sbjct: 92 STVNVANKIYVMQNYAVKGAFNAIATGSFRSEAESVNFAESAAAA---KKINGWVEEKTN 148
Query: 595 ---KD--SWSAKTKLXPATXVANV*RHFLPGGTGTFRSTPSETEEKDFHVDE 735
KD S A +L V V HF GT T++ PS T F + E
Sbjct: 149 NKIKDLISPDALDELSRMVLVNAV--HF--KGTWTYQFDPSLTRPFPFWLSE 196
>AJ420785-2|CAD12782.1| 382|Anopheles gambiae serpin protein.
Length = 382
Score = 54.4 bits (125), Expect = 4e-09
Identities = 55/172 (31%), Positives = 79/172 (45%), Gaps = 9/172 (5%)
Frame = +1
Query: 247 KNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGG---EAQESTHTYGLLNQRYAEFDP 417
+NV+ SP + LSL GAG + E++ +L G Q Y L +R A
Sbjct: 34 ENVVISPFSISACLSLAAMGAGGLTAEQMYSVLEFGAPDRKQTVADNYRRLMERLA--TD 91
Query: 418 KFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFSAPKNAR*YHQPLGGRXDSRTH 594
+ VANKIYV Y + AF+ A FRSE +++NF+ A + + G + +T+
Sbjct: 92 STVNVANKIYVMQNYAVKGAFNAIATGSFRSEAESVNFAESAAAA---KKINGWVEEKTN 148
Query: 595 ---KD--SWSAKTKLXPATXVANV*RHFLPGGTGTFRSTPSETEEKDFHVDE 735
KD S A +L V V HF GT T++ PS T F + E
Sbjct: 149 NKIKDLISPDALDELSRMVLVNAV--HF--KGTWTYQFDPSLTRPFPFWLSE 196
>AJ420785-1|CAD12781.1| 379|Anopheles gambiae serpin protein.
Length = 379
Score = 54.4 bits (125), Expect = 4e-09
Identities = 55/172 (31%), Positives = 79/172 (45%), Gaps = 9/172 (5%)
Frame = +1
Query: 247 KNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGG---EAQESTHTYGLLNQRYAEFDP 417
+NV+ SP + LSL GAG + E++ +L G Q Y L +R A
Sbjct: 34 ENVVISPFSISACLSLAAMGAGGLTAEQMYSVLEFGAPDRKQTVADNYRRLMERLA--TD 91
Query: 418 KFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFSAPKNAR*YHQPLGGRXDSRTH 594
+ VANKIYV Y + AF+ A FRSE +++NF+ A + + G + +T+
Sbjct: 92 STVNVANKIYVMQNYAVKGAFNAIATGSFRSEAESVNFAESAAAA---KKINGWVEEKTN 148
Query: 595 ---KD--SWSAKTKLXPATXVANV*RHFLPGGTGTFRSTPSETEEKDFHVDE 735
KD S A +L V V HF GT T++ PS T F + E
Sbjct: 149 NKIKDLISPDALDELSRMVLVNAV--HF--KGTWTYQFDPSLTRPFPFWLSE 196
>AY341219-1|AAR13783.1| 200|Anopheles gambiae SRPN10 protein.
Length = 200
Score = 53.2 bits (122), Expect = 1e-08
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Frame = +1
Query: 247 KNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGG---EAQESTHTYGLLNQRYAEFDP 417
+NV+ SP + LSL GAG + E++ +L G + Q Y L +R A
Sbjct: 79 ENVVISPFSISACLSLAAMGAGGLTAEQMYSVLEFGAPDKKQTVADNYRRLMERLA--TD 136
Query: 418 KFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFS 531
+ VANKIYV Y + AF+ A FRSE +++NF+
Sbjct: 137 STVNVANKIYVMQNYAVKGAFNAIATGSFRSEAESVNFA 175
>AY341217-1|AAR13781.1| 200|Anopheles gambiae SRPN10 protein.
Length = 200
Score = 53.2 bits (122), Expect = 1e-08
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Frame = +1
Query: 247 KNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGG---EAQESTHTYGLLNQRYAEFDP 417
+NV+ SP + LSL GAG + E++ +L G + Q Y L +R A
Sbjct: 79 ENVVISPFSISACLSLAAMGAGGLTAEQMYSVLEFGAPDKKQTVADNYRRLMERLA--TD 136
Query: 418 KFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFS 531
+ VANKIYV Y + AF+ A FRSE +++NF+
Sbjct: 137 STVNVANKIYVMQNYAVKGAFNAIATGSFRSEAESVNFA 175
>AY341216-1|AAR13780.1| 200|Anopheles gambiae SRPN10 protein.
Length = 200
Score = 53.2 bits (122), Expect = 1e-08
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Frame = +1
Query: 247 KNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGG---EAQESTHTYGLLNQRYAEFDP 417
+NV+ SP + LSL GAG + E++ +L G + Q Y L +R A
Sbjct: 79 ENVVISPFSISACLSLAAMGAGGLTAEQMYSVLEFGAPDKKQTVADNYRRLMERLA--TD 136
Query: 418 KFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFS 531
+ VANKIYV Y + AF+ A FRSE +++NF+
Sbjct: 137 STVNVANKIYVMQNYAVKGAFNAIATGSFRSEAESVNFA 175
>AY341215-1|AAR13779.1| 200|Anopheles gambiae SRPN10 protein.
Length = 200
Score = 53.2 bits (122), Expect = 1e-08
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Frame = +1
Query: 247 KNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGG---EAQESTHTYGLLNQRYAEFDP 417
+NV+ SP + LSL GAG + E++ +L G + Q Y L +R A
Sbjct: 79 ENVVISPFSISACLSLAAMGAGGLTAEQMYSVLEFGAPDKKQTVADNYRRLMERLA--TD 136
Query: 418 KFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFS 531
+ VANKIYV Y + AF+ A FRSE +++NF+
Sbjct: 137 STVNVANKIYVMQNYAVKGAFNAIATGSFRSEAESVNFA 175
>AY341218-1|AAR13782.1| 200|Anopheles gambiae SRPN10 protein.
Length = 200
Score = 52.8 bits (121), Expect = 1e-08
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Frame = +1
Query: 247 KNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGG---EAQESTHTYGLLNQRYAEFDP 417
+NV+ SP + LSL GAG + E++ +L G Q Y L +R A
Sbjct: 79 ENVVISPFSISACLSLAAMGAGGLTAEQMYSVLEFGAPDRKQTVADNYRRLMERLA--TD 136
Query: 418 KFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFS 531
+ VANKIYV Y + AF+ A FRSE +++NF+
Sbjct: 137 STVNVANKIYVMQNYAVKGAFNAIATGSFRSEAESVNFA 175
>AJ271353-1|CAB69785.1| 380|Anopheles gambiae putative serine
protease inhibitor protein.
Length = 380
Score = 52.8 bits (121), Expect = 1e-08
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Frame = +1
Query: 247 KNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGG---EAQESTHTYGLLNQRYAEFDP 417
+NV+ SP + LSL GAG + E++ +L G Q Y L +R A
Sbjct: 34 ENVVISPFSISACLSLAAMGAGGLTAEQMYSVLEFGAPDRKQTVADNYRRLMERLA--TD 91
Query: 418 KFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFS 531
+ VANKIYV Y + AF+ A FRSE +++NF+
Sbjct: 92 STVNVANKIYVMQNYAVKGAFNAIATGSFRSEAESVNFA 130
>AJ271352-1|CAB69784.1| 379|Anopheles gambiae putative serine
protease inhibitor protein.
Length = 379
Score = 52.8 bits (121), Expect = 1e-08
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Frame = +1
Query: 247 KNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGG---EAQESTHTYGLLNQRYAEFDP 417
+NV+ SP + LSL GAG + E++ +L G Q Y L +R A
Sbjct: 34 ENVVISPFSISACLSLAAMGAGGLTAEQMYSVLEFGAPDRKQTVADNYRRLMERLA--TD 91
Query: 418 KFLTVANKIYVSDQYKLADAFSRTA-NLFRSEVDNINFS 531
+ VANKIYV Y + AF+ A FRSE +++NF+
Sbjct: 92 STVNVANKIYVMQNYAVKGAFNAIATGSFRSEAESVNFA 130
>EF117200-1|ABL67437.1| 421|Anopheles gambiae serpin 1 protein.
Length = 421
Score = 32.3 bits (70), Expect = 0.020
Identities = 27/106 (25%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Frame = +1
Query: 241 DDKNVIASPLGVMLLLS-LYES---GAGAQSKEEIREILGGGEAQESTHTYGLLNQRYAE 408
+D NV+ SP + LLL+ LYE+ G+G +S+ E + + +T L +
Sbjct: 56 EDSNVVFSPFSIKLLLTLLYEAAEPGSGTRSQLEAALVDPDLNQTRAFYTQFLDASQQTN 115
Query: 409 FDPKFLTVANKIYVSD-QYKLADAFS-RTANLFRSEVDNINFSAPK 540
D +F + K+++ + KL A++ ++R+ V+ ++F+ K
Sbjct: 116 GDYEF-DIGTKMFLDKARAKLPQAYTDLLEQMYRTSVERVSFNGTK 160
>DQ974169-1|ABJ52809.1| 508|Anopheles gambiae serpin 11 protein.
Length = 508
Score = 32.3 bits (70), Expect = 0.020
Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 1/115 (0%)
Frame = +1
Query: 205 SLKILKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESTHTYG 384
++K+ ++++ D N I SP+ V LLS GA ++ E+ +L
Sbjct: 134 AVKLFQKAFPSDDTSNYIISPIMVQSLLSYLFDGASNATRLEMESVLQLNMNDLHDIERA 193
Query: 385 LLNQRYAE-FDPKFLTVANKIYVSDQYKLADAFSRTANLFRSEVDNINFSAPKNA 546
L Q E L A++I+ S ++L AF + + ++FS P+ A
Sbjct: 194 LTPQADQEPITKNKLDSASQIFKSTTFELLPAFRDSLKSNHVPLSEMDFSNPRLA 248
>DQ974163-1|ABJ52803.1| 595|Anopheles gambiae serpin 4B protein.
Length = 595
Score = 31.5 bits (68), Expect = 0.034
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = +1
Query: 178 RLGDAIDKTSLKILKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGE 357
++ D++ + KI N K I SP+ + LSL G+G Q+++E+ ++G
Sbjct: 26 KVSDSVTNLAAKIANALSN-QKSKTEIFSPVSIAGALSLLLLGSGGQTQQELLAVMGLNT 84
Query: 358 AQ---ESTH-TYGLLNQRYAEFDP 417
Q + H ++G L Q DP
Sbjct: 85 GQLSFQDIHLSFGRLFQDLVSNDP 108
>DQ974173-1|ABJ52813.1| 553|Anopheles gambiae serpin 16 protein.
Length = 553
Score = 30.3 bits (65), Expect = 0.079
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +1
Query: 247 KNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESTHTYGLLNQRYAE 408
K + SP+ + LSL GA A++K+E+ ++LG + + H ++Q Y++
Sbjct: 96 KAAVFSPVSIACALSLMLLGAEAKTKDELIQVLGFEQYRNHLHN---IHQLYSD 146
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
cytoskeletal structural protein protein.
Length = 1645
Score = 26.6 bits (56), Expect = 0.98
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 346 GGGEAQESTHTYGLLNQRYAEFDPKFLTVANKIYVSDQYKLADAFS 483
GGG+ S H N R A+ L AN++ VSD + L+++ S
Sbjct: 307 GGGKLSSSRHVEAERNARNAQH---LLLRANRLTVSDNHNLSNSGS 349
>DQ974171-1|ABJ52811.1| 403|Anopheles gambiae serpin 14 protein.
Length = 403
Score = 24.2 bits (50), Expect = 5.2
Identities = 11/48 (22%), Positives = 27/48 (56%)
Frame = +1
Query: 205 SLKILKESYNLADDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILG 348
SL + K ++ ++NV+ +P + +++ S A +++ +RE+ G
Sbjct: 37 SLSLYKAAFK--PEQNVVVAPFTLQNSIAMLYSIATGTTRDRLREVFG 82
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 24.2 bits (50), Expect = 5.2
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = -3
Query: 655 VKHWQRPWRGSILSSLTRSLYGSLSLXVRPTVDDISGHSSE 533
V+ WQR W + S TR L ++ + +I H S+
Sbjct: 856 VEAWQREWSTTTSGSWTRRLIPNIQPWITRRHGNIEFHMSQ 896
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 23.8 bits (49), Expect = 6.9
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = +1
Query: 241 DDKNVIASPLGVMLLLSLYESGAGAQSKEEIREILGGGEAQESTH 375
DD ++ L L++++++G+ + S +LG GE TH
Sbjct: 342 DDHALLKQQLIPSNLVNMFDNGSPSTSCGAPPALLGSGEGGSGTH 386
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.8 bits (49), Expect = 6.9
Identities = 12/57 (21%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Frame = +2
Query: 434 PIKYTFPTSIS-WPTRSPEQRICSEAKWTTLTSALRRMPADIINRWADXQTQGPIKT 601
P ++ PT+ + W + P + WT T+ + W+D P T
Sbjct: 162 PTTWSAPTTTTTWSDQPPPPTTTTTTVWTDSTATTTTPASTTTTTWSDLPPPPPTTT 218
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 23.4 bits (48), Expect = 9.1
Identities = 12/57 (21%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Frame = +2
Query: 434 PIKYTFPTSIS-WPTRSPEQRICSEAKWTTLTSALRRMPADIINRWADXQTQGPIKT 601
P ++ PT+ + W + P + WT T+ + W+D P T
Sbjct: 161 PTTWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPASTTTTTWSDLPPPPPTTT 217
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 23.4 bits (48), Expect = 9.1
Identities = 12/57 (21%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Frame = +2
Query: 434 PIKYTFPTSIS-WPTRSPEQRICSEAKWTTLTSALRRMPADIINRWADXQTQGPIKT 601
P ++ PT+ + W + P + WT T+ + W+D P T
Sbjct: 161 PTTWSAPTTTTTWSDQPPPPTTTTTTVWTDPTATTTTPASTTTTTWSDLPPPPPTTT 217
>AF281078-2|AAF82132.1| 755|Anopheles gambiae vitellogenin 2
protein.
Length = 755
Score = 23.4 bits (48), Expect = 9.1
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 184 GDAIDKTSLKILKESYNLADDKNVIASP 267
G A D+ L SYN+A DKN P
Sbjct: 331 GPADDRQVFVDLVYSYNMAHDKNNFVRP 358
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
protein.
Length = 2051
Score = 23.4 bits (48), Expect = 9.1
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +1
Query: 184 GDAIDKTSLKILKESYNLADDKNVIASP 267
G A D+ L SYN+A DKN P
Sbjct: 331 GPADDRQVFVDLVYSYNMAHDKNNFVRP 358
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 851,358
Number of Sequences: 2352
Number of extensions: 17787
Number of successful extensions: 77
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92613024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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