Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_E03
         (867 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    25   1.2  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   2.8  
DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       23   4.8  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               22   6.4  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    22   6.4  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   6.4  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   8.4  

>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 14/42 (33%), Positives = 18/42 (42%)
 Frame = +1

Query: 553 YHQPLGGRXDSRTHKDSWSAKTKLXPATXVANV*RHFLPGGT 678
           YHQ L G   ++ +  S S    L P    ANV +   P  T
Sbjct: 745 YHQQLQGVAKNKKNVGSMSRNKALLPVIKPANVNKEQSPNST 786


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 23.4 bits (48), Expect = 2.8
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -2

Query: 137 VPHTNVTNNSSLSMTGCAATDTGR 66
           +P+T V N++ +++TG  A  T R
Sbjct: 366 IPNTEVFNDTKITITGLNAVTTYR 389


>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +3

Query: 324 GRDKGNPWGRGGSR 365
           GR KG   G+GGSR
Sbjct: 79  GRGKGRGHGKGGSR 92



 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 321 QGRDKGNPWGRGGSRVNT 374
           +G  KG   GRGG+R  T
Sbjct: 84  RGHGKGGSRGRGGNRGRT 101


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = +3

Query: 744 HPETRQCRLLTGPW 785
           HP  R  RL+  PW
Sbjct: 574 HPSDRSARLMLQPW 587


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +2

Query: 278 CCCFPCTSLE 307
           C C PCTS+E
Sbjct: 113 CMCRPCTSVE 122


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +1

Query: 691 STPSETEEKDFHVDEKTIIXKPDNAVSLQVLGF 789
           S+ S +EE DF   + T+   P N++    +G+
Sbjct: 376 SSISSSEENDFWQPKPTLEDAPQNSLLPNFVGY 408


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 427 SRISGRILRNADLIIRMCV 371
           SRIS RI RN  L+   C+
Sbjct: 34  SRISNRISRNRVLLRGQCI 52


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,930
Number of Sequences: 438
Number of extensions: 4555
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)