Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_E02
(854 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical pr... 304 6e-83
AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical ... 37 0.021
Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical pr... 32 0.60
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 32 0.60
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 32 0.60
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 32 0.60
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 32 0.60
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 4.2
U97009-2|AAC69029.3| 342|Caenorhabditis elegans Serpentine rece... 29 4.2
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 29 4.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 4.2
U29380-1|AAA68740.1| 346|Caenorhabditis elegans Hypothetical pr... 29 4.2
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 4.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.2
AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical ... 29 4.2
AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical ... 29 4.2
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 29 5.6
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 5.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 5.6
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 5.6
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 5.6
AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical... 29 5.6
AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical... 29 5.6
Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical pr... 28 7.4
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 28 7.4
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 7.4
Z81586-6|CAB04697.2| 393|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 28 9.7
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 28 9.7
U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in bl... 28 9.7
U64859-8|AAC69096.1| 378|Caenorhabditis elegans Prion-like-(q/n... 28 9.7
U49830-16|AAK31480.1| 392|Caenorhabditis elegans Hypothetical p... 28 9.7
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 28 9.7
U27312-10|AAA68253.1| 231|Caenorhabditis elegans Hypothetical p... 28 9.7
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 28 9.7
>Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical
protein B0250.1 protein.
Length = 260
Score = 304 bits (746), Expect = 6e-83
Identities = 132/185 (71%), Positives = 157/185 (84%)
Frame = +1
Query: 97 RDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDR 276
RDPYK+KT K +A EG++TGQF++CG KA +++GN++PVG +PEGT +CN+E K GDR
Sbjct: 64 RDPYKYKTVKTTVVAAEGMHTGQFIHCGAKAQIQIGNIVPVGTLPEGTTICNVENKSGDR 123
Query: 277 GRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAG 456
G +ARASGN+ATVI HNPD K+TR++LPSGAKKV+ S NR M+G+VAGGGR DKP+LKAG
Sbjct: 124 GVIARASGNYATVIAHNPDTKKTRIRLPSGAKKVVQSVNRAMIGLVAGGGRTDKPLLKAG 183
Query: 457 RAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIXXASTVKRGTSAGPKVGLIAARRT 636
R+YHKYK KRN WP VRGVAMNPVEHPHGGGNHQHI STV+R SAG KVGLIAARRT
Sbjct: 184 RSYHKYKAKRNSWPRVRGVAMNPVEHPHGGGNHQHIGHPSTVRRDASAGKKVGLIAARRT 243
Query: 637 GRIPG 651
GRI G
Sbjct: 244 GRIRG 248
>AF045646-7|AAK29833.2| 321|Caenorhabditis elegans Hypothetical
protein F56B3.8 protein.
Length = 321
Score = 36.7 bits (81), Expect = 0.021
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Frame = +1
Query: 202 GNVMPVGAMPEGTIVCNLEE-KMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKV 378
GN P+G++ GT++ ++E D +A+G AT++ H D T VKLP +
Sbjct: 160 GNAYPIGSLAAGTVINSIERYPTMDSETFVKAAGTSATIVRHQGDF--TVVKLPHKHEFS 217
Query: 379 LPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVK 483
L + VG ++ ID I + + + ++ K
Sbjct: 218 LHRTCMATVGRLSHAD-IDGKIFGSAQMHRRFGYK 251
>Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical
protein C08B6.10 protein.
Length = 140
Score = 31.9 bits (69), Expect = 0.60
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = +3
Query: 786 GVHWAPPPXPXXPXAPXPGPPPP 854
G W PP P P P PGPPPP
Sbjct: 114 GPWWRRPPPPWGP--PPPGPPPP 134
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 31.9 bits (69), Expect = 0.60
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 798 APPPXPXXPXAPXPGPPPP 854
APPP P AP P PPPP
Sbjct: 40 APPPPPMCGCAPPPPPPPP 58
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 31.9 bits (69), Expect = 0.60
Identities = 14/24 (58%), Positives = 14/24 (58%), Gaps = 3/24 (12%)
Frame = +3
Query: 792 HWAPPPXPXXP---XAPXPGPPPP 854
H APPP P P AP P PPPP
Sbjct: 231 HGAPPPPPLPPVGAGAPPPPPPPP 254
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 31.9 bits (69), Expect = 0.60
Identities = 14/24 (58%), Positives = 14/24 (58%), Gaps = 3/24 (12%)
Frame = +3
Query: 792 HWAPPPXPXXP---XAPXPGPPPP 854
H APPP P P AP P PPPP
Sbjct: 217 HGAPPPPPLPPVGAGAPPPPPPPP 240
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 31.9 bits (69), Expect = 0.60
Identities = 14/24 (58%), Positives = 14/24 (58%), Gaps = 3/24 (12%)
Frame = +3
Query: 792 HWAPPPXPXXP---XAPXPGPPPP 854
H APPP P P AP P PPPP
Sbjct: 217 HGAPPPPPLPPVGAGAPPPPPPPP 240
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 804 PPXPXXPXAPXPGPPPP 854
PP P P P P PPPP
Sbjct: 354 PPAPPPPPPPPPPPPPP 370
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 801 PPPXPXXPXAPXPGPPPP 854
PPP P P P P PP P
Sbjct: 112 PPPAPAAPCCPPPPPPTP 129
>U97009-2|AAC69029.3| 342|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 33 protein.
Length = 342
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = -3
Query: 207 ISNFKSCFLSTINKLACVEPFGSNEELLPCLELVWIAGSVQQPKVHLXPGSWIINLKN 34
+S F + +++L VEP + ++PCL L IA V + L WI+ L N
Sbjct: 265 VSVFPASIFWCLSQLGFVEPTMYSYFIIPCLSLGCIADPVVTIRCVLPYRRWILKLCN 322
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 798 APPPXPXXPXAPXPGPPPP 854
APPP P P P P PPPP
Sbjct: 133 APPPPPSPP--PPPPPPPP 149
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 801 PPPXPXXPXAPXPGPPPP 854
PPP P P P P PPP
Sbjct: 140 PPPPPRVPRTPPPRSPPP 157
>U29380-1|AAA68740.1| 346|Caenorhabditis elegans Hypothetical
protein ZK546.7 protein.
Length = 346
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 804 PPXPXXPXAPXPGPPPP 854
P P P P PGPPPP
Sbjct: 147 PKLPPPPPIPPPGPPPP 163
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 801 PPPXPXXPXAPXPGPPP 851
PPP P P P P PPP
Sbjct: 134 PPPTPAAPPPPPPPPPP 150
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 801 PPPXPXXPXAPXPGPPPP 854
PPP P P P PPPP
Sbjct: 1344 PPPPPSDDLTPVPPPPPP 1361
>AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.2 protein.
Length = 381
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 804 PPXPXXPXAPXPGPPPP 854
P P P P PGPPPP
Sbjct: 182 PKPPPPPPIPPPGPPPP 198
>AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.3 protein.
Length = 381
Score = 29.1 bits (62), Expect = 4.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 804 PPXPXXPXAPXPGPPPP 854
P P P P PGPPPP
Sbjct: 182 PKPPPPPPIPPPGPPPP 198
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical
protein F25H8.5c protein.
Length = 732
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 804 PPXPXXPXAPXPGPPPP 854
PP P P PGPPPP
Sbjct: 94 PPPPRNNCLPPPGPPPP 110
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical
protein F25H8.5b protein.
Length = 369
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 804 PPXPXXPXAPXPGPPPP 854
PP P P PGPPPP
Sbjct: 94 PPPPRNNCLPPPGPPPP 110
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical
protein F25H8.5a protein.
Length = 780
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 804 PPXPXXPXAPXPGPPPP 854
PP P P PGPPPP
Sbjct: 94 PPPPRNNCLPPPGPPPP 110
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 801 PPPXPXXPXAPXPGPPPP 854
PPP P P P P PP P
Sbjct: 65 PPPPPPPPMCPPPPPPMP 82
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 801 PPPXPXXPXAPXPGPPPP 854
PPP P P P PPPP
Sbjct: 32 PPPPPMCAPPPLPCPPPP 49
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 801 PPPXPXXPXAPXPGPPPP 854
PPP P P P PPPP
Sbjct: 63 PPPPPPPPPPMCPPPPPP 80
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 801 PPPXPXXPXAPXPGPPPP 854
PPP P P P PPPP
Sbjct: 759 PPPPPPPGGCPPPPPPPP 776
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 801 PPPXPXXPXAPXPGPPPP 854
PPP P P P PPPP
Sbjct: 758 PPPPPPPPGGCPPPPPPP 775
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 801 PPPXPXXPXAPXPGPPPP 854
PPP P P P PPPP
Sbjct: 760 PPPPPPGGCPPPPPPPPP 777
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 801 PPPXPXXPXAPXPGPPPP 854
PPP P P P PPPP
Sbjct: 759 PPPPPPPGGCPPPPPPPP 776
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 801 PPPXPXXPXAPXPGPPPP 854
PPP P P P PPPP
Sbjct: 758 PPPPPPPPGGCPPPPPPP 775
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 801 PPPXPXXPXAPXPGPPPP 854
PPP P P P PPPP
Sbjct: 760 PPPPPPGGCPPPPPPPPP 777
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 28.7 bits (61), Expect = 5.6
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 801 PPPXPXXPXAPXPGPPPP 854
PPP P P P PPPP
Sbjct: 342 PPPPPPPGGCPPPPPPPP 359
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 801 PPPXPXXPXAPXPGPPPP 854
PPP P P P PPPP
Sbjct: 341 PPPPPPPPGGCPPPPPPP 358
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 801 PPPXPXXPXAPXPGPPPP 854
PPP P P P PPPP
Sbjct: 343 PPPPPPGGCPPPPPPPPP 360
>AC024859-11|AAK29981.1| 933|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15a protein.
Length = 933
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 789 VHWAPPPXPXXPXAPXPGPPPP 854
+H APP P P P PPPP
Sbjct: 778 MHSAPPSPLTAPIPPPPPPPPP 799
>AC024859-10|ABA00158.1| 832|Caenorhabditis elegans Hypothetical
protein Y71H2AM.15b protein.
Length = 832
Score = 28.7 bits (61), Expect = 5.6
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 789 VHWAPPPXPXXPXAPXPGPPPP 854
+H APP P P P PPPP
Sbjct: 677 MHSAPPSPLTAPIPPPPPPPPP 698
>Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical
protein T24B8.1 protein.
Length = 134
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 316 IGHNPDAKRTRVKLPSGAKKVL 381
IGH D +RTR LP+G KKVL
Sbjct: 57 IGHGSD-RRTRFVLPNGYKKVL 77
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 795 WAPPPXPXXPXAPXPGPPP 851
+ PPP P AP GPPP
Sbjct: 210 YPPPPSQQSPYAPQAGPPP 228
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 801 PPPXPXXPXAPXPGPPPP 854
PPP P P P PPPP
Sbjct: 577 PPPPPPPPMLGGPPPPPP 594
Score = 28.3 bits (60), Expect = 7.4
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 801 PPPXPXXPXAPXPGPPPP 854
PPP P P P PPPP
Sbjct: 579 PPPPPPMLGGPPPPPPPP 596
>Z81586-6|CAB04697.2| 393|Caenorhabditis elegans Hypothetical
protein T05F1.8 protein.
Length = 393
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = -1
Query: 482 LTLYLWYALPAFKIGLSI-RPPPATIP---TMPLLLDGRTFLAP 363
LT W+ +FK+ +++ RPPP +P L + G T +AP
Sbjct: 309 LTALQWFIYDSFKVAMNLPRPPPPQMPESLKKKLGIPGTTEVAP 352
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/21 (57%), Positives = 12/21 (57%), Gaps = 3/21 (14%)
Frame = +3
Query: 801 PPPXPXXPX---APXPGPPPP 854
PPP P P AP P PPPP
Sbjct: 795 PPPPPLPPISSGAPPPPPPPP 815
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/21 (57%), Positives = 12/21 (57%), Gaps = 3/21 (14%)
Frame = +3
Query: 801 PPPXPXXPX---APXPGPPPP 854
PPP P P AP P PPPP
Sbjct: 795 PPPPPLPPISSGAPPPPPPPP 815
>U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 9 protein.
Length = 378
Score = 27.9 bits (59), Expect = 9.7
Identities = 22/76 (28%), Positives = 27/76 (35%)
Frame = -2
Query: 475 CTCGMPFQLSK*VCQYVHLQQQYRPCLCCLMAEPSWLQTVALLLYA*HQDCVQSQWRSFQ 296
C+C Q CQ +QQQ C C A+P QTV + C QS + Q
Sbjct: 37 CSCQQVQQTQSCSCQSAPVQQQAPSCSC---AQPQQTQTVQVQSTQCAPACQQSCRQQCQ 93
Query: 295 RHVPDDLYHPFSLQDC 248
P Q C
Sbjct: 94 SAPAVSQCQPMCQQQC 109
>U64859-8|AAC69096.1| 378|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 57
protein.
Length = 378
Score = 27.9 bits (59), Expect = 9.7
Identities = 22/76 (28%), Positives = 27/76 (35%)
Frame = -2
Query: 475 CTCGMPFQLSK*VCQYVHLQQQYRPCLCCLMAEPSWLQTVALLLYA*HQDCVQSQWRSFQ 296
C+C Q CQ +QQQ C C A+P QTV + C QS + Q
Sbjct: 37 CSCQQVQQTQSCSCQSAPVQQQAPSCSC---AQPQQTQTVQVQSTQCAPACQQSCRQQCQ 93
Query: 295 RHVPDDLYHPFSLQDC 248
P Q C
Sbjct: 94 SAPAVSQCQPMCQQQC 109
>U49830-16|AAK31480.1| 392|Caenorhabditis elegans Hypothetical
protein C33F10.12 protein.
Length = 392
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = -1
Query: 482 LTLYLWYALPAFKIGLSI-RPPPATIP---TMPLLLDGRTFLAP 363
LT W+ +FK+ +++ RPPP +P L + G T +AP
Sbjct: 309 LTALQWFIYDSFKVAMNLPRPPPPRMPESLKKKLGIPGTTEVAP 352
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 801 PPPXPXXPXAPXPGPPPP 854
PPP P P P PPPP
Sbjct: 135 PPPPPHYPPPPPHYPPPP 152
>U27312-10|AAA68253.1| 231|Caenorhabditis elegans Hypothetical
protein F26A1.12 protein.
Length = 231
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 792 HWAPPPXPXXPXAPXPGPPPP 854
H PP P P P P PPP
Sbjct: 46 HGPRPPRPNRPPRPPPATPPP 66
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 27.9 bits (59), Expect = 9.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 798 APPPXPXXPXAPXPGPPPP 854
APPP P P PPPP
Sbjct: 83 APPPPPPPPPPTLKAPPPP 101
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,657,243
Number of Sequences: 27780
Number of extensions: 420051
Number of successful extensions: 2056
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1265
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1857
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -