Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_E01
(833 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.009
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 35 0.016
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 34 0.022
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.087
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 0.18
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 30 0.35
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 25 0.39
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.61
SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual 29 0.61
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 29 0.81
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 29 1.1
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 1.1
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 28 1.4
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 1.4
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 23 3.3
SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor Sp... 27 4.3
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 27 4.3
SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces pomb... 26 5.7
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 26 7.6
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 35.5 bits (78), Expect = 0.009
Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 5/28 (17%)
Frame = +2
Query: 764 PPPXXXXPPPPXPPP-----XPPXPPPP 832
P P PPPP PPP PP PPPP
Sbjct: 754 PAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 31.5 bits (68), Expect = 0.15
Identities = 14/40 (35%), Positives = 15/40 (37%)
Frame = +3
Query: 714 LXXPXSISPMXXXNSSTPPPXXXXPPPPXPXXXPXPPPPP 833
L P P + P P PP P P PPPPP
Sbjct: 729 LKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 29.9 bits (64), Expect = 0.47
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 766 PPPXXXPPPPXXPXXPPXPPPP 831
PPP PP PP PPPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPP 782
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.7 bits (76), Expect = 0.016
Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
Frame = +2
Query: 764 PPPXXXXPPPPXPPPXPPXPP--PP 832
PPP PPPP PP P PP PP
Sbjct: 1708 PPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 33.5 bits (73), Expect = 0.038
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
Frame = +3
Query: 723 PXSISPMXXXNSSTPPPXXXXPP----PPXPXXXPXPPPPP 833
P S +P + PPP PP PP P P PPPP
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 31.1 bits (67), Expect = 0.20
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +1
Query: 760 VPPPPXXXPPPPXXPXXPPXPPP 828
VPPPP P P P PP P P
Sbjct: 1714 VPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 30.3 bits (65), Expect = 0.35
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +3
Query: 735 SPMXXXNSSTPPPXXXXPPPPXPXXXPXPPPPP 833
+P S+ PP PPP P P PP P
Sbjct: 1689 TPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAP 1721
Score = 29.1 bits (62), Expect = 0.81
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +3
Query: 723 PXSISPMXXXNSSTPPPXXXXPPPPXPXXXPXPPPPP 833
P S P+ +++ P PPPP P P PP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPP 1722
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 34.3 bits (75), Expect = 0.022
Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
Frame = +2
Query: 767 PPXXXXPPPPXP---PPXPPXPPPP 832
PP PPPP P PP P PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 31.9 bits (69), Expect = 0.12
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 3/29 (10%)
Frame = +3
Query: 756 SSTPPPXXXXPPPP---XPXXXPXPPPPP 833
+S PP PPPP P P PPPPP
Sbjct: 2 ASLPPGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 32.3 bits (70), Expect = 0.087
Identities = 15/24 (62%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
Frame = -3
Query: 828 GGGXGGXGGGXG--GGGXXXXGGG 763
GGG GG GGG G GGG GGG
Sbjct: 241 GGGPGGFGGGLGGFGGGPGGFGGG 264
Score = 30.7 bits (66), Expect = 0.27
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -3
Query: 828 GGGXGGXGGGXGGGGXXXXGGG 763
GGG GG GGG GG G G G
Sbjct: 248 GGGLGGFGGGPGGFGGGPGGHG 269
Score = 29.9 bits (64), Expect = 0.47
Identities = 13/23 (56%), Positives = 13/23 (56%)
Frame = -1
Query: 833 GGGGGXGGXXGXXGGGGXXXGGG 765
GG GG GG G GGG GGG
Sbjct: 235 GGPGGFGGGPGGFGGGLGGFGGG 257
Score = 27.9 bits (59), Expect = 1.9
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -3
Query: 828 GGGXGGXGGGXGGGGXXXXG-GGY 760
GGG GG GGG GG G GG+
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGF 210
Score = 27.5 bits (58), Expect = 2.5
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -1
Query: 833 GGGGGXGGXXGXXGGGGXXXGGG 765
GG GG G G GGG GGG
Sbjct: 228 GGPGGFEGGPGGFGGGPGGFGGG 250
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = -1
Query: 833 GGGGGXGGXXGXXGG--GGXXXGGGG 762
G GGG GG G GG GG GGG
Sbjct: 239 GFGGGPGGFGGGLGGFGGGPGGFGGG 264
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect = 1.9
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 3/27 (11%)
Frame = +2
Query: 758 EYPP---PXXXXPPPPXPPPXPPXPPP 829
E PP P P P PPP PP PP
Sbjct: 222 EIPPTYTPKQADPLPAPPPPPPPTLPP 248
Score = 27.5 bits (58), Expect = 2.5
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 785 PPPPXPPPXPPXPP 826
PPPP P PP PP
Sbjct: 273 PPPPATPSQPPRPP 286
Score = 27.1 bits (57), Expect = 3.3
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 770 PXXXXPPPPXPPPXPPXPPPP 832
P P P P PP PPPP
Sbjct: 224 PPTYTPKQADPLPAPPPPPPP 244
Score = 25.8 bits (54), Expect = 7.6
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +3
Query: 723 PXSISPMXXXNSSTPPPXXXXPPPPXPXXXPXPPPPP 833
P S P +T P PPPP PPPPP
Sbjct: 168 PPSFQPPSAAAPATSLPSDYNPPPP-------PPPPP 197
Score = 25.4 bits (53), Expect(2) = 0.18
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +2
Query: 788 PPPXPPPXPPXPPPP 832
P P PPP PP PP
Sbjct: 234 PLPAPPPPPPPTLPP 248
Score = 24.2 bits (50), Expect(2) = 0.18
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 767 PPXXXXPPPPXPPP 808
P PPPP PPP
Sbjct: 184 PSDYNPPPPPPPPP 197
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 30.3 bits (65), Expect = 0.35
Identities = 15/27 (55%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
Frame = -1
Query: 833 GGGGGXGGXXGXXG-GGGXXXGGGGTR 756
GG GG GG G G GGG G GG R
Sbjct: 454 GGFGGRGGFGGRGGFGGGRGRGRGGAR 480
Score = 26.2 bits (55), Expect = 5.7
Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Frame = -3
Query: 831 GGGGXGGXGG--GXGGGGXXXXGGGYS 757
G GG GG GG G GGG GG S
Sbjct: 455 GFGGRGGFGGRGGFGGGRGRGRGGARS 481
Score = 25.8 bits (54), Expect = 7.6
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 828 GGGXGGXGGGXGGGGXXXXGGGY 760
GGG G GG GG G GG+
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGF 468
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 25.0 bits (52), Expect(2) = 0.39
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 791 PPXPPPXPPXPP 826
P PPP PP PP
Sbjct: 942 PAFPPPPPPPPP 953
Score = 23.4 bits (48), Expect(2) = 0.39
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +2
Query: 767 PPXXXXPPPPXPPPXP 814
P P PP PPP P
Sbjct: 899 PTIITHPTPPPPPPLP 914
Score = 23.0 bits (47), Expect(2) = 2.4
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 806 PXPPXPPPP 832
P PP PPPP
Sbjct: 945 PPPPPPPPP 953
Score = 22.6 bits (46), Expect(2) = 2.4
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 794 PXPPPXPPXP 823
P PPP PP P
Sbjct: 905 PTPPPPPPLP 914
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.5 bits (63), Expect = 0.61
Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +3
Query: 684 LPXPNTSXYYLXXPXS-ISPMXXXNSSTPP--PXXXXPPPPXPXXXPXPPPPP 833
+P P+ + + P S I P+ + PP P PP P P P PPP
Sbjct: 1161 VPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 28.3 bits (60), Expect = 1.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 760 VPPPPXXXPPPPXXPXXPPXPPP 828
VPPP P P PP PPP
Sbjct: 1191 VPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 27.1 bits (57), Expect = 3.3
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 764 PPPXXXXPPPPXPPPXPPXPPP 829
P P PP P P PP P P
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKP 1203
Score = 27.1 bits (57), Expect = 3.3
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 764 PPPXXXXPPPPXPPPXPPXPPP 829
P P PP P P PP P P
Sbjct: 1201 PKPSVGVPPVPPPSTAPPVPTP 1222
Score = 26.6 bits (56), Expect = 4.3
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 764 PPPXXXXPPPPXPPPXPPXPPP 829
P P PP P P PP P P
Sbjct: 1105 PKPSVAVPPVPAPSGAPPVPKP 1126
Score = 26.6 bits (56), Expect = 4.3
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 764 PPPXXXXPPPPXPPPXPPXPPP 829
P P PP P P PP P P
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVPKP 1145
Score = 26.6 bits (56), Expect = 4.3
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 764 PPPXXXXPPPPXPPPXPPXPPP 829
P P PP P P PP P P
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKP 1164
Score = 25.8 bits (54), Expect = 7.6
Identities = 12/50 (24%), Positives = 18/50 (36%)
Frame = +3
Query: 684 LPXPNTSXYYLXXPXSISPMXXXNSSTPPPXXXXPPPPXPXXXPXPPPPP 833
+P P++ + P P+ + P P PP P PP P
Sbjct: 1066 VPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVP 1115
Score = 25.8 bits (54), Expect = 7.6
Identities = 12/50 (24%), Positives = 19/50 (38%)
Frame = +3
Query: 684 LPXPNTSXYYLXXPXSISPMXXXNSSTPPPXXXXPPPPXPXXXPXPPPPP 833
+P P+ + + P P+ + + PP PP P PP P
Sbjct: 1104 VPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVP 1153
Score = 25.8 bits (54), Expect = 7.6
Identities = 12/50 (24%), Positives = 19/50 (38%)
Frame = +3
Query: 684 LPXPNTSXYYLXXPXSISPMXXXNSSTPPPXXXXPPPPXPXXXPXPPPPP 833
+P P+ + + P P+ + + PP PP P PP P
Sbjct: 1123 VPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
>SPAC4F8.13c |rng2||IQGAP|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1489
Score = 29.5 bits (63), Expect = 0.61
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 259 NDCFTDEECLLSVNSLRQHHMLLAGFKDLGYSFV 360
N FTDE+ + V LRQ +++L FK L F+
Sbjct: 162 NLSFTDEDVSIIVRRLRQSNVILPNFKALSADFM 195
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 29.1 bits (62), Expect = 0.81
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 770 PXXXXPPPPXPPPXPPXP 823
P PP P PPP PP P
Sbjct: 802 PFKAPPPAPLPPPAPPLP 819
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = -1
Query: 833 GGGGGXGGXXGXXGGGGXXXGG--GGTRV 753
GG GG GG G GG GG GG +V
Sbjct: 45 GGRGGRGGARGGRGGSSGGRGGAKGGAKV 73
Score = 27.9 bits (59), Expect = 1.9
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 831 GGGGXGGXGGGXGGGGXXXXGGG 763
G GG G GG GGG GGG
Sbjct: 17 GRGGFNGGRGGFGGGRGGARGGG 39
Score = 27.5 bits (58), Expect = 2.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 833 GGGGGXGGXXGXXGGGGXXXGGGG 762
GG GG G G GGG GGG
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGG 39
Score = 27.5 bits (58), Expect = 2.5
Identities = 13/24 (54%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
Frame = -1
Query: 827 GGGXGGXXGXXGG-GGXXXGGGGT 759
GGG GG G GG GG G GG+
Sbjct: 37 GGGRGGARGGRGGRGGARGGRGGS 60
Score = 27.1 bits (57), Expect = 3.3
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -3
Query: 825 GGXGGXGGGXGGGGXXXXGG 766
GG GG GGG GG GG
Sbjct: 23 GGRGGFGGGRGGARGGGRGG 42
Score = 26.6 bits (56), Expect = 4.3
Identities = 13/24 (54%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Frame = -3
Query: 831 GGGGXGGXGGGXGG--GGXXXXGG 766
GGG G GGG GG GG GG
Sbjct: 29 GGGRGGARGGGRGGARGGRGGRGG 52
Score = 26.2 bits (55), Expect = 5.7
Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Frame = -1
Query: 833 GGGGGX-GGXXGXXGG-GGXXXGGGGTR 756
GG GG GG G GG GG G GG R
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGAR 36
Score = 26.2 bits (55), Expect = 5.7
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = -1
Query: 833 GGGGGXGGXXGXXGGGGXXXGGGGTR 756
G GGG GG G GG G GG G R
Sbjct: 27 GFGGGRGGARG--GGRGGARGGRGGR 50
Score = 25.8 bits (54), Expect = 7.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 828 GGGXGGXGGGXGGGGXXXXGG 766
GG GG GG GGG GG
Sbjct: 26 GGFGGGRGGARGGGRGGARGG 46
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 28.7 bits (61), Expect = 1.1
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -3
Query: 831 GGGGXGGXGGGXGGGGXXXXGGG 763
GGG GG GGG GG GG
Sbjct: 163 GGGSRGGFGGGSRGGSRGGFRGG 185
Score = 27.1 bits (57), Expect = 3.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 825 GGXGGXGGGXGGGGXXXXGGG 763
GG GG GG GG GGG
Sbjct: 145 GGRGGSRGGFGGNSRGGFGGG 165
Score = 26.6 bits (56), Expect = 4.3
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 833 GGGGGXGGXXGXXGGGGXXXGGGGTR 756
G GG GG G GG GGG+R
Sbjct: 142 GFRGGRGGSRGGFGGNSRGGFGGGSR 167
Score = 26.2 bits (55), Expect = 5.7
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 828 GGGXGGXGGGXGGGGXXXXGGGY 760
GG GG GG GGG GG+
Sbjct: 160 GGFGGGSRGGFGGGSRGGSRGGF 182
Score = 25.8 bits (54), Expect = 7.6
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 4/26 (15%)
Frame = -3
Query: 828 GGGXGGXG----GGXGGGGXXXXGGG 763
GG GG G GG GGG GGG
Sbjct: 148 GGSRGGFGGNSRGGFGGGSRGGFGGG 173
Score = 25.8 bits (54), Expect = 7.6
Identities = 13/27 (48%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Frame = -1
Query: 833 GGGGGXGGXX-GXXGGGGXXXGGGGTR 756
G GG GG G GGG GGG+R
Sbjct: 149 GSRGGFGGNSRGGFGGGSRGGFGGGSR 175
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 28.3 bits (60), Expect = 1.4
Identities = 13/22 (59%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = -3
Query: 828 GGGXGGXG-GGXGGGGXXXXGG 766
GGG GG G GG GG G GG
Sbjct: 225 GGGLGGAGLGGLGGAGLGGFGG 246
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.3 bits (60), Expect = 1.4
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 758 EYPPPXXXXPPPPXPPPXPPXPPP 829
E PP P P PPP P PP
Sbjct: 136 ELRPPTSAPPRPSIPPPSPASAPP 159
Score = 27.1 bits (57), Expect = 3.3
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 764 PPPXXXXPPPPXPPPXPPXPPP 829
P P PP PP P PPP
Sbjct: 131 PTPQSELRPPTSAPPRPSIPPP 152
Score = 26.6 bits (56), Expect = 4.3
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +2
Query: 785 PPPPXPPPXPPXPPPP 832
PPPP P P P PP
Sbjct: 7 PPPPAPAPAAAAPAPP 22
Score = 26.2 bits (55), Expect = 5.7
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 767 PPXXXXPPPPXPPPXPPXPPPP 832
PP P PP P PPPP
Sbjct: 184 PPSAPSLPSAVPPMPPKVPPPP 205
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 22.6 bits (46), Expect(2) = 3.3
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +2
Query: 764 PPPXXXXPPPPXPPPXP 814
P P PP PPP P
Sbjct: 347 PTPQVQGSRPPPPPPMP 363
Score = 22.6 bits (46), Expect(2) = 3.3
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 800 PPPXPPXPPP 829
PPP PP P P
Sbjct: 356 PPPPPPMPAP 365
>SPAC1F7.01c |spt6|SPAC694.07c|transcription elongation factor
Spt6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1365
Score = 26.6 bits (56), Expect = 4.3
Identities = 11/37 (29%), Positives = 18/37 (48%)
Frame = -2
Query: 172 WEFRRIRTLHSGFRNSPRTPKIIETGATNIFATCFRF 62
W+ RR +H+ + TP + + NIF C +F
Sbjct: 337 WQHRRDYIVHNNRERNTITPLLSQNDLWNIFFLCTKF 373
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 26.6 bits (56), Expect = 4.3
Identities = 15/43 (34%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Frame = +2
Query: 710 LPXTPXXYITNX*X*LEYPPPXXXXPPPPXP--PPXPPXPPPP 832
LP P +N + PP PPPP P P PPP
Sbjct: 336 LPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 26.6 bits (56), Expect = 4.3
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +2
Query: 785 PPPPXPPPXPPXPPP 829
PP P PP PP PP
Sbjct: 415 PPVPTPPSLPPSAPP 429
Score = 26.6 bits (56), Expect = 4.3
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 763 PPPPXXXPPPPXXPXXPPXPPP 828
PP P P P P P PPP
Sbjct: 457 PPLPAGMPAAPPLPPAAPAPPP 478
Score = 26.2 bits (55), Expect = 5.7
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 764 PPPXXXXPPPPXPPPXPPXPPP 829
P P PP PP PP PP
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPP 437
Score = 26.2 bits (55), Expect = 5.7
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = +2
Query: 764 PPPXXXXPPPPXPPPXPPXPPPP 832
P P PP PP P PP P
Sbjct: 458 PLPAGMPAAPPLPPAAPAPPPAP 480
>SPCC645.07 |rgf1||RhoGEF for Rho1, Rgf1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1334
Score = 26.2 bits (55), Expect = 5.7
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -1
Query: 410 PIWFHPAPS*IFPLPPATNE*PKSLNPARS 321
P + PAP PLPP T P+ P RS
Sbjct: 37 PAFMEPAPVSKKPLPPPTRRLPRKPLPFRS 66
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 25.8 bits (54), Expect = 7.6
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 8/54 (14%)
Frame = +1
Query: 229 DLVVIQHTVSNDCFTDEE---CL----LSVNSLRQ-HHMLLAGFKDLGYSFVAG 366
+L ++ + + NDCFT E CL LS N L + F DL + FV+G
Sbjct: 810 ELYLVDNRLGNDCFTALEYFKCLKVLNLSYNYLTEIPSKFFQNFSDLKHLFVSG 863
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,421,893
Number of Sequences: 5004
Number of extensions: 75637
Number of successful extensions: 856
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 449
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 410448950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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