Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_E01
(833 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 26 0.37
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 26 0.37
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 2.6
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 23 4.6
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 23 4.6
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 23 4.6
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 22 6.1
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 22 6.1
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 22 6.1
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 22 6.1
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 26.2 bits (55), Expect = 0.37
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +2
Query: 785 PPPPXPPPXPPXPPPP 832
PP P PPP PP P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Score = 23.0 bits (47), Expect = 3.5
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 753 NSSTPPPXXXXPPPP 797
+S TPP PPPP
Sbjct: 334 DSDTPPKPAPPPPPP 348
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 26.2 bits (55), Expect = 0.37
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 763 PPPPXXXPPPPXXPXXPPXPPP 828
PP P PPP P PP P
Sbjct: 39 PPNPSQGPPPGGPPGAPPSQNP 60
Score = 23.0 bits (47), Expect = 3.5
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +2
Query: 767 PPXXXXPPPPXPPPXPPXPPPP 832
PP PPP PP P P
Sbjct: 39 PPNPSQGPPPGGPPGAPPSQNP 60
Score = 21.8 bits (44), Expect = 8.0
Identities = 11/37 (29%), Positives = 13/37 (35%)
Frame = +3
Query: 723 PXSISPMXXXNSSTPPPXXXXPPPPXPXXXPXPPPPP 833
P S +P + P PP P P P PP
Sbjct: 16 PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPP 52
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.4 bits (48), Expect = 2.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 785 PPPPXPPP 808
PPPP PPP
Sbjct: 1355 PPPPPPPP 1362
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 22.6 bits (46), Expect = 4.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 483 RQLLPKVSNETDPYGYIIVV 424
R LLPK E PY ++VV
Sbjct: 601 RLLLPKGKKEGMPYNVLVVV 620
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 22.6 bits (46), Expect = 4.6
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = -3
Query: 396 SRSFINFSVASSHE*IAQVLE 334
+RSF+ FS+ S + +A+V++
Sbjct: 295 ARSFVPFSIERSSQSVAEVMD 315
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 22.6 bits (46), Expect = 4.6
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 483 RQLLPKVSNETDPYGYIIVV 424
R LLPK E PY ++VV
Sbjct: 601 RLLLPKGKKEGMPYNVLVVV 620
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 22.2 bits (45), Expect = 6.1
Identities = 14/57 (24%), Positives = 18/57 (31%), Gaps = 2/57 (3%)
Frame = +3
Query: 651 CSQXYXXKYFI--LPXPNTSXYYLXXPXSISPMXXXNSSTPPPXXXXPPPPXPXXXP 815
C + Y +I +P P Y P + P P PP P P P
Sbjct: 104 CKKLYYNINYIEQIPIPVPVYYGNFPPRPMGPWISMQEQIPRFRYIGPPTPFPRFIP 160
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 6.1
Identities = 14/57 (24%), Positives = 18/57 (31%), Gaps = 2/57 (3%)
Frame = +3
Query: 651 CSQXYXXKYFI--LPXPNTSXYYLXXPXSISPMXXXNSSTPPPXXXXPPPPXPXXXP 815
C + Y +I +P P Y P + P P PP P P P
Sbjct: 109 CKKLYYNINYIEQIPIPVPVYYGNFPPRPMGPWISMQEQIPRFRYIGPPTPFPRFIP 165
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 6.1
Identities = 14/57 (24%), Positives = 18/57 (31%), Gaps = 2/57 (3%)
Frame = +3
Query: 651 CSQXYXXKYFI--LPXPNTSXYYLXXPXSISPMXXXNSSTPPPXXXXPPPPXPXXXP 815
C + Y +I +P P Y P + P P PP P P P
Sbjct: 109 CKKLYYNINYIEQIPIPVPVYYGNFPPRPMGPWISMQEQIPRFRYIGPPTPFPRFIP 165
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 22.2 bits (45), Expect = 6.1
Identities = 14/57 (24%), Positives = 18/57 (31%), Gaps = 2/57 (3%)
Frame = +3
Query: 651 CSQXYXXKYFI--LPXPNTSXYYLXXPXSISPMXXXNSSTPPPXXXXPPPPXPXXXP 815
C + Y +I +P P Y P + P P PP P P P
Sbjct: 109 CKKLYYNINYIEQIPIPVPVYYGNFPPRPMGPWISMQEQIPRFRYIGPPTPFPRFIP 165
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 262,235
Number of Sequences: 438
Number of extensions: 9295
Number of successful extensions: 48
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26702940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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