Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_D24
         (913 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (gr...    30   2.6  
Z77657-6|CAB01150.2|  607|Caenorhabditis elegans Hypothetical pr...    29   4.6  
Z49937-6|CAA90185.2|  453|Caenorhabditis elegans Hypothetical pr...    29   6.1  
U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (grd
           related) protein 4 protein.
          Length = 210

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 16/54 (29%), Positives = 16/54 (29%)
 Frame = +3

Query: 747 PAPXPPXPXHLPXPXPRXLDP*XXXXXXXXXXXXXXXXXXXPPSXHTPXPPPXP 908
           P P PP P   P P P    P                    PP    P PPP P
Sbjct: 29  PCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPPPMP 82


>Z77657-6|CAB01150.2|  607|Caenorhabditis elegans Hypothetical
           protein F08H9.1 protein.
          Length = 607

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -2

Query: 471 RSPHENIEVLSVVEDSEDFD 412
           R+P+ENI++L   +DSED D
Sbjct: 581 RAPYENIDLLLSTDDSEDID 600


>Z49937-6|CAA90185.2|  453|Caenorhabditis elegans Hypothetical
           protein F14F3.3 protein.
          Length = 453

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
 Frame = +1

Query: 229 ILQPTMFEDIKEIAKEYNIEKSCDKYMNVDV-VXQFMEMYKMGMLPRGETFVHTNELQME 405
           I+ PT      ++    NIE S D  +N+D+   +F + ++ GM     +      L + 
Sbjct: 272 IMGPTDLNAFDKLKTRENIEMSSDAIVNLDIPKVEFSDGFRDGMKAWNRSVQTWLALYVH 331

Query: 406 EAVKVFRV 429
             VKV RV
Sbjct: 332 SRVKVMRV 339


>U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical
           protein B0280.13 protein.
          Length = 616

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 16/54 (29%), Positives = 17/54 (31%)
 Frame = +3

Query: 747 PAPXPPXPXHLPXPXPRXLDP*XXXXXXXXXXXXXXXXXXXPPSXHTPXPPPXP 908
           P P PP P  +P P P    P                    P S   P PPP P
Sbjct: 470 PKPAPPPPSRIPNPSP---SPQPAEVSKSPPPPPPLPPIATPSSVPPPPPPPPP 520


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,619,222
Number of Sequences: 27780
Number of extensions: 277369
Number of successful extensions: 774
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 752
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2328783996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)