Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_D23
(883 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1118 + 27756288-27756337,27756505-27756619,27756883-277570... 156 3e-38
02_04_0261 + 21363787-21363891,21364185-21364286,21365854-213659... 83 2e-16
01_05_0431 - 22084474-22084635,22084740-22084844,22084931-220850... 67 2e-11
01_06_0663 - 30991390-30992340 62 8e-10
06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,831... 50 3e-06
05_07_0134 - 27911920-27912762 45 7e-05
12_02_0842 - 23588826-23589198,23589548-23590203 32 0.53
03_02_0386 + 8009884-8010133,8010274-8010338,8010545-8010658,801... 31 1.2
07_01_0885 + 7353926-7354770,7354845-7355487 30 2.1
05_03_0525 + 15002846-15003048,15004814-15004937,15005458-150054... 29 3.7
06_01_0717 - 5219848-5220178,5220268-5220617,5221807-5221982,522... 28 8.6
>06_03_1118 +
27756288-27756337,27756505-27756619,27756883-27757033,
27757219-27757301,27757424-27757519,27757615-27757757,
27757858-27757942,27758158-27758237,27758335-27758422
Length = 296
Score = 156 bits (378), Expect = 3e-38
Identities = 77/172 (44%), Positives = 106/172 (61%)
Frame = -3
Query: 671 APVXGGVMGAQNVTXAFMAGGXKEDFERSLXLLKVMGXKQFHCGQIGSGQVAKLTNNMLM 492
APV GGV A+ FM GG +E + + LL MG K +CG G+G VAK+ NNM M
Sbjct: 116 APVSGGVPAAEAGKLTFMVGGSEEAYLAAKPLLLSMGKKTIYCGGAGNGSVAKICNNMAM 175
Query: 491 GITGMATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGG 312
I+ + +E +G +G++ VL D+ N SSAR WS++ Y PVPG++ PSSRNYDGG
Sbjct: 176 AISMLGVSEAFALGQNLGIKASVLTDIFNCSSARCWSSDTYNPVPGVMMDVPSSRNYDGG 235
Query: 311 FKNELMVKDLELASGMALGIRSPIPLGAVAXQLYRIVQSRGYGQKDFSFVFQ 156
F ++LM KDL+LA A G+ P G+ A ++YR + + G KDFS F+
Sbjct: 236 FTSKLMTKDLDLAMASASGVGFNCPFGSQALEIYRKLCADGCELKDFSCAFR 287
>02_04_0261 +
21363787-21363891,21364185-21364286,21365854-21365964,
21366233-21366334,21366901-21367016,21367180-21367258,
21367347-21367517,21367617-21367712
Length = 293
Score = 83.4 bits (197), Expect = 2e-16
Identities = 57/185 (30%), Positives = 94/185 (50%), Gaps = 2/185 (1%)
Frame = -3
Query: 695 RKGLGFTXAPVXGGVMGAQNVTXAFMAGGXKEDFERSLXLLKVMGXKQFHCGQIGSGQVA 516
+KG F APV G A++ +A G K ++ + V+G K F G+IG+G
Sbjct: 110 QKGGAFVEAPVSGSKKPAEDGQLVILAAGDKVLYDDMVPAFDVLGKKSFFLGEIGNGAKM 169
Query: 515 KLTNNMLMGITGMATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAP 336
KL NM+MG A +E +++ GL P+ LLDVL+ + + P+ L +
Sbjct: 170 KLVVNMIMGSMMNALSEGLSLADNSGLSPQTLLDVLDLGAIAN-------PMFKLKGPSM 222
Query: 335 SSRNYDGGFKNELMVKDLELASGMALGIRSPI--PLGAVAXQLYRIVQSRGYGQKDFSFV 162
+Y+ F + KD+ LA +ALG + + P+ A + + ++ +S G G DFS V
Sbjct: 223 LQGSYNPAFPLKHQQKDMRLA--LALGDENAVSMPVAAASNEAFKKARSLGLGDLDFSAV 280
Query: 161 FQLLK 147
+++LK
Sbjct: 281 YEVLK 285
>01_05_0431 -
22084474-22084635,22084740-22084844,22084931-22085003,
22085109-22085179,22085429-22085548,22085631-22085715,
22085812-22085867,22085978-22086053,22086546-22086611,
22086843-22087060
Length = 343
Score = 66.9 bits (156), Expect = 2e-11
Identities = 41/136 (30%), Positives = 68/136 (50%)
Frame = -3
Query: 554 QFHCGQIGSGQVAKLTNNMLMGITGMATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTE 375
+F G +G G KL NM+MG ++ +E + + K+GL+P L++V++ +
Sbjct: 209 RFFLGDVGKGADMKLVVNMVMGSMMVSFSEGLLLSEKVGLDPNTLVEVISQGA------- 261
Query: 374 VYCPVPGLVPTAPSSRNYDGGFKNELMVKDLELASGMALGIRSPIPLGAVAXQLYRIVQS 195
+ P+ L + Y F + KDL LA +A + IP A A +LY++ +S
Sbjct: 262 ISAPMFSLKGPSMVKAAYPTAFPLKHQQKDLRLALALAESVSQSIPTVAAANELYKVAKS 321
Query: 194 RGYGQKDFSFVFQLLK 147
G +DFS V + LK
Sbjct: 322 LGLADQDFSAVIEALK 337
>01_06_0663 - 30991390-30992340
Length = 316
Score = 61.7 bits (143), Expect = 8e-10
Identities = 51/170 (30%), Positives = 74/170 (43%)
Frame = -3
Query: 692 KGLGFTXAPVXGGVMGAQNVTXAFMAGGXKEDFERSLXLLKVMGXKQFHCGQIGSGQVAK 513
K APV GG GA++ T + AGG R L K+MG + G G+GQ AK
Sbjct: 131 KSCAAVDAPVSGGDRGARSATLSIFAGGDAAVVARLAPLFKLMG-NALYMGGPGAGQRAK 189
Query: 512 LTNNMLMGITGMATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPS 333
L N + + T + E M K GL+ L+ ++ +A S S ++Y
Sbjct: 190 LGNQIAIASTMVGLVEGMVYAHKAGLDVAKWLEAISTGAAGSKSLDLY-------GKRML 242
Query: 332 SRNYDGGFKNELMVKDLELASGMALGIRSPIPLGAVAXQLYRIVQSRGYG 183
R+ GF VKDL + + +P A+A QLY + + G G
Sbjct: 243 ERDMAAGFYVRHFVKDLGICLSECQAMGLALPGLALAHQLYVSLLAHGEG 292
>06_01_1052 +
8312752-8312862,8312969-8313041,8313285-8313362,
8313443-8313523,8313706-8313779,8313865-8313919,
8314031-8314079,8314222-8314359,8314455-8314536,
8315131-8315209,8315357-8315400,8315479-8315673,
8316110-8316185,8317427-8317507,8317623-8317703,
8318128-8318204,8318402-8318499,8318672-8318809,
8319397-8319478,8319564-8319642,8319885-8319931,
8320014-8320228,8320330-8320450,8320529-8320648,
8320731-8320849,8320964-8321036,8321112-8321231,
8321538-8321606,8321756-8321926,8322004-8322051,
8322192-8322333,8323244-8323341,8323684-8323828,
8323928-8324013,8324112-8324222,8324456-8324530,
8324836-8324901,8325036-8325224,8325315-8325425,
8326616-8326696,8327192-8327371
Length = 1385
Score = 49.6 bits (113), Expect = 3e-06
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 1/174 (0%)
Frame = -3
Query: 671 APVXGGVMGAQNVTXAFMAGGXKEDFERSLXLLKVMGXKQFHC-GQIGSGQVAKLTNNML 495
APV GGV A T K + S+ + + K + G G+ K+ N +L
Sbjct: 443 APVSGGVKRAAEGTLT--TNMQKLVHDCSIFYVTALSEKLYVIKGGCGAASSVKMVNQLL 500
Query: 494 MGITGMATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDG 315
G+ + AE M G ++ L + L +++ ++ SW VP ++ +Y
Sbjct: 501 AGVHIASAAEAMAFGARLNLRTRRLFEIIQHARGYSWMFGNR--VPHML-----DNDYTP 553
Query: 314 GFKNELMVKDLELASGMALGIRSPIPLGAVAXQLYRIVQSRGYGQKDFSFVFQL 153
++ VKDL + S + R P+ + ++A QL+ + G+G+ D + V ++
Sbjct: 554 YSAVDIFVKDLGIVSHESSNARIPLHVSSIAHQLFLSGSASGWGRFDDAAVVKV 607
>05_07_0134 - 27911920-27912762
Length = 280
Score = 45.2 bits (102), Expect = 7e-05
Identities = 39/180 (21%), Positives = 78/180 (43%), Gaps = 2/180 (1%)
Frame = -3
Query: 671 APVXGGVMGAQNVTXAFMAGGXKEDFERSLXLLKVMGXKQFHCGQIGSGQVAKLTNNMLM 492
+PV GG +GA++ A +AGG + L +G + + G GSGQ +K+ N + +
Sbjct: 105 SPVSGGDVGARDGALALLAGGDEAVVSWLAPLFAHLG-RPTYMGPPGSGQSSKIANQIAV 163
Query: 491 GITGMATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGG 312
+ +E + GL+ + LD ++ +A S +++ R + G
Sbjct: 164 AGAVVGASEALAFANAAGLDAPLFLDAVSKGAAGSRVMDIF-------GERMLRREFASG 216
Query: 311 FKNELMVKDLELASGMALGIR--SPIPLGAVAXQLYRIVQSRGYGQKDFSFVFQLLKEEN 138
+ ++KDL +A G +P A+ Q++ + + G G + +++ N
Sbjct: 217 GSVKYIIKDLGMALETEEGPEGAKALPGAAMFRQMFSAMAANGDGDLSLQGLITVVERLN 276
>12_02_0842 - 23588826-23589198,23589548-23590203
Length = 342
Score = 32.3 bits (70), Expect = 0.53
Identities = 21/71 (29%), Positives = 33/71 (46%)
Frame = +1
Query: 331 LDGAVGTSPGTGQYTSVDQERADELFSTSNRTFGSSPILMPMFMHSAVAIPVMPINMLLV 510
LDG G G+Y + ++ AD+L + +R ++PIL P S + + + L
Sbjct: 128 LDGDERGCAG-GRYDWLLEDFADKLVNDHHRRMMAAPILPPWMSSSPSSSSSPSVTLSLA 186
Query: 511 SLATCPEPICP 543
S A P P P
Sbjct: 187 SAAVAPAPAAP 197
>03_02_0386 +
8009884-8010133,8010274-8010338,8010545-8010658,
8010736-8010895,8010975-8011093,8011209-8011635,
8011834-8012057,8012863-8012973,8013056-8013188,
8013259-8013365,8013430-8013444,8013482-8013571,
8013855-8013917,8013973-8014053,8014136-8014208,
8014312-8014367,8014460-8014554,8014649-8014683,
8015449-8015525
Length = 764
Score = 31.1 bits (67), Expect = 1.2
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = -3
Query: 467 ECMNMGIKMGLEPKVLLDV-LNNSSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMV 291
+C++MG++ G PK+ +DV L + R +V + L+ R+YDG + E M
Sbjct: 484 KCIDMGMEFGTLPKMDVDVPLTSLHIRRTLLDVPKKIDILIVIMADDRSYDG--EIEEMC 541
Query: 290 KDLELASGMALGIRSPIPLGAVAXQL-YRIVQS 195
+ L + L S L VA Q+ ++V+S
Sbjct: 542 ESLRIVYVFCLPCLSKRNLKRVARQIQLKVVKS 574
>07_01_0885 + 7353926-7354770,7354845-7355487
Length = 495
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -3
Query: 401 SSARSWSTEVYCPVPGLVPTAPSSRNYDGGFKNELMVKDLE 279
S+ R W E+YCPV ++ P+ + D + L + LE
Sbjct: 216 SAIRLWKVELYCPVVAMIMEHPAHQTKDEKLQFSLNYQHLE 256
>05_03_0525 +
15002846-15003048,15004814-15004937,15005458-15005481,
15005995-15006779,15006839-15006873,15007108-15007601,
15007951-15008452,15008725-15008867,15009523-15009576,
15010255-15010362,15010529-15010705,15011169-15011186,
15011561-15011938,15012125-15012310,15012356-15013205,
15013362-15013402,15013491-15013868,15014195-15014236,
15014528-15014678,15015621-15015670
Length = 1580
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 846 WPTKKXGVXXGTWAXDGRXGFMRKKGIA 763
WP G G+WA G F R++G+A
Sbjct: 70 WPPPHHGRERGSWASGGEARFCRQEGVA 97
>06_01_0717 -
5219848-5220178,5220268-5220617,5221807-5221982,
5222065-5222302,5224492-5224657,5224792-5225159,
5225261-5225436,5227742-5227976,5228242-5228493,
5228513-5228848
Length = 875
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 4/45 (8%)
Frame = -2
Query: 324 LRWRLQKRT--YG*GLRISQWHGV--GYSFADPIGRCRXSALPHR 202
LRW L K T Y Q HG+ GYSF+ I CR LP R
Sbjct: 333 LRWLLSKLTEMYYKRHTPMQRHGMVPGYSFSQSILACRLGILPKR 377
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,382,600
Number of Sequences: 37544
Number of extensions: 477131
Number of successful extensions: 1198
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1190
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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