BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_D23
(883 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY069057-1|AAL39202.2| 345|Drosophila melanogaster GH06781p pro... 189 5e-48
AE013599-2766|AAM68444.1| 324|Drosophila melanogaster CG15093-P... 189 5e-48
AE013599-2765|AAF57639.2| 324|Drosophila melanogaster CG15093-P... 189 5e-48
AY069497-1|AAL39642.1| 602|Drosophila melanogaster LD22344p pro... 48 1e-05
AE014134-1751|AAF52846.3| 602|Drosophila melanogaster CG4747-PA... 48 1e-05
>AY069057-1|AAL39202.2| 345|Drosophila melanogaster GH06781p
protein.
Length = 345
Score = 189 bits (460), Expect = 5e-48
Identities = 84/184 (45%), Positives = 125/184 (67%)
Frame = -3
Query: 692 KGLGFTXAPVXGGVMGAQNVTXAFMAGGXKEDFERSLXLLKVMGXKQFHCGQIGSGQVAK 513
KG F APV GGV GA+ T FM GG + ++ +L+ MG K HCG G GQ AK
Sbjct: 158 KGARFIDAPVSGGVPGAEQATLTFMVGGTEAEYNAVKAVLECMGKKITHCGVYGMGQAAK 217
Query: 512 LTNNMLMGITGMATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPS 333
L NNM++ I+ + +E MN+ ++ GL+ V +++N+S+ R W++E+Y PVPG+ P+AP+
Sbjct: 218 LCNNMMLAISMIGVSEAMNLAVRQGLDANVFAEIINSSTGRCWASEIYNPVPGVCPSAPA 277
Query: 332 SRNYDGGFKNELMVKDLELASGMALGIRSPIPLGAVAXQLYRIVQSRGYGQKDFSFVFQL 153
+R+Y GGF + L+ KDL LASG+A SPIPLG++A ++Y+ + +G G KDFS V+ L
Sbjct: 278 NRDYAGGFSSALITKDLGLASGVANASNSPIPLGSLAHKVYQSLCDKGLGNKDFSVVYDL 337
Query: 152 LKEE 141
+K+E
Sbjct: 338 MKKE 341
>AE013599-2766|AAM68444.1| 324|Drosophila melanogaster CG15093-PB,
isoform B protein.
Length = 324
Score = 189 bits (460), Expect = 5e-48
Identities = 84/184 (45%), Positives = 125/184 (67%)
Frame = -3
Query: 692 KGLGFTXAPVXGGVMGAQNVTXAFMAGGXKEDFERSLXLLKVMGXKQFHCGQIGSGQVAK 513
KG F APV GGV GA+ T FM GG + ++ +L+ MG K HCG G GQ AK
Sbjct: 137 KGARFIDAPVSGGVPGAEQATLTFMVGGTEAEYNAVKAVLECMGKKITHCGVYGMGQAAK 196
Query: 512 LTNNMLMGITGMATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPS 333
L NNM++ I+ + +E MN+ ++ GL+ V +++N+S+ R W++E+Y PVPG+ P+AP+
Sbjct: 197 LCNNMMLAISMIGVSEAMNLAVRQGLDANVFAEIINSSTGRCWASEIYNPVPGVCPSAPA 256
Query: 332 SRNYDGGFKNELMVKDLELASGMALGIRSPIPLGAVAXQLYRIVQSRGYGQKDFSFVFQL 153
+R+Y GGF + L+ KDL LASG+A SPIPLG++A ++Y+ + +G G KDFS V+ L
Sbjct: 257 NRDYAGGFSSALITKDLGLASGVANASNSPIPLGSLAHKVYQSLCDKGLGNKDFSVVYDL 316
Query: 152 LKEE 141
+K+E
Sbjct: 317 MKKE 320
>AE013599-2765|AAF57639.2| 324|Drosophila melanogaster CG15093-PA,
isoform A protein.
Length = 324
Score = 189 bits (460), Expect = 5e-48
Identities = 84/184 (45%), Positives = 125/184 (67%)
Frame = -3
Query: 692 KGLGFTXAPVXGGVMGAQNVTXAFMAGGXKEDFERSLXLLKVMGXKQFHCGQIGSGQVAK 513
KG F APV GGV GA+ T FM GG + ++ +L+ MG K HCG G GQ AK
Sbjct: 137 KGARFIDAPVSGGVPGAEQATLTFMVGGTEAEYNAVKAVLECMGKKITHCGVYGMGQAAK 196
Query: 512 LTNNMLMGITGMATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPS 333
L NNM++ I+ + +E MN+ ++ GL+ V +++N+S+ R W++E+Y PVPG+ P+AP+
Sbjct: 197 LCNNMMLAISMIGVSEAMNLAVRQGLDANVFAEIINSSTGRCWASEIYNPVPGVCPSAPA 256
Query: 332 SRNYDGGFKNELMVKDLELASGMALGIRSPIPLGAVAXQLYRIVQSRGYGQKDFSFVFQL 153
+R+Y GGF + L+ KDL LASG+A SPIPLG++A ++Y+ + +G G KDFS V+ L
Sbjct: 257 NRDYAGGFSSALITKDLGLASGVANASNSPIPLGSLAHKVYQSLCDKGLGNKDFSVVYDL 316
Query: 152 LKEE 141
+K+E
Sbjct: 317 MKKE 320
>AY069497-1|AAL39642.1| 602|Drosophila melanogaster LD22344p
protein.
Length = 602
Score = 48.4 bits (110), Expect = 1e-05
Identities = 37/176 (21%), Positives = 72/176 (40%), Gaps = 2/176 (1%)
Frame = -3
Query: 680 FTXAPVXGGVMGAQNVTXAFMAGGXKEDFERSLXLLKVMGXKQFHCGQIGSGQVAKLTNN 501
+ A + G A +AGG + FE K + F G IG+ L
Sbjct: 431 YLEAQIHGSRQEAAEGMLIILAGGDRSVFEECHSCFKTIAKNTFFLGNIGNACKVNLILQ 490
Query: 500 MLMGITGMATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNY 321
++G++ + AE + + + + ++D+ + +S +S P L+
Sbjct: 491 TILGVSLVGLAEALALADRFSISLNDIIDIFDLTSMKS---------PMLLAKGKEMAKG 541
Query: 320 DGGFKNEL--MVKDLELASGMALGIRSPIPLGAVAXQLYRIVQSRGYGQKDFSFVF 159
D + L M +DL L MA + +P+ ++ ++++ + GY + D S VF
Sbjct: 542 DFNPQQPLSHMQRDLRLVLNMAENLDQSMPVTSITNEVFKHTKRLGYSEHDSSAVF 597
>AE014134-1751|AAF52846.3| 602|Drosophila melanogaster CG4747-PA
protein.
Length = 602
Score = 48.4 bits (110), Expect = 1e-05
Identities = 37/176 (21%), Positives = 72/176 (40%), Gaps = 2/176 (1%)
Frame = -3
Query: 680 FTXAPVXGGVMGAQNVTXAFMAGGXKEDFERSLXLLKVMGXKQFHCGQIGSGQVAKLTNN 501
+ A + G A +AGG + FE K + F G IG+ L
Sbjct: 431 YLEAQIHGSRQEAAEGMLIILAGGDRSVFEECHSCFKTIAKNTFFLGNIGNACKVNLILQ 490
Query: 500 MLMGITGMATAECMNMGIKMGLEPKVLLDVLNNSSARSWSTEVYCPVPGLVPTAPSSRNY 321
++G++ + AE + + + + ++D+ + +S +S P L+
Sbjct: 491 TILGVSLVGLAEALALADRFSISLNDIIDIFDLTSMKS---------PMLLAKGKEMAKG 541
Query: 320 DGGFKNEL--MVKDLELASGMALGIRSPIPLGAVAXQLYRIVQSRGYGQKDFSFVF 159
D + L M +DL L MA + +P+ ++ ++++ + GY + D S VF
Sbjct: 542 DFNPQQPLSHMQRDLRLVLNMAENLDQSMPVTSITNEVFKHTKRLGYSEHDSSAVF 597
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,888,664
Number of Sequences: 53049
Number of extensions: 756042
Number of successful extensions: 3377
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2188
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3345
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4291240668
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -