Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_D21
         (884 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5MGF9 Cluster: Putative uncharacterized protein; n=1; ...    43   0.012
UniRef50_A5TXS5 Cluster: Putative uncharacterized protein; n=3; ...    35   3.2  
UniRef50_UPI00015A592A Cluster: Type IV collagen alpha 4 chain; ...    34   4.2  
UniRef50_A5AY32 Cluster: Putative uncharacterized protein; n=1; ...    34   4.2  
UniRef50_A6SNU7 Cluster: Putative uncharacterized protein; n=1; ...    34   5.5  
UniRef50_Q0JQC8 Cluster: Os01g0169900 protein; n=7; commelinids|...    33   7.3  
UniRef50_Q9VBZ2 Cluster: CG11786-PA; n=1; Drosophila melanogaste...    33   7.3  
UniRef50_A0BRA8 Cluster: Chromosome undetermined scaffold_122, w...    33   7.3  
UniRef50_A7F7C3 Cluster: Putative uncharacterized protein; n=1; ...    33   7.3  

>UniRef50_Q5MGF9 Cluster: Putative uncharacterized protein; n=1;
           Lonomia obliqua|Rep: Putative uncharacterized protein -
           Lonomia obliqua (Moth)
          Length = 88

 Score = 42.7 bits (96), Expect = 0.012
 Identities = 38/99 (38%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
 Frame = +1

Query: 91  MKFFMIFVLALLAMANAQ-DPVRVVENADSADPFFAQPTVGNGYEPIDNRPYIVNPPKDY 267
           M+  + F  A+LAMA AQ D V+VV+N++   P   Q  + N  +P  ++P         
Sbjct: 1   MRAIVFFFFAILAMAAAQRDSVQVVDNSNQV-PSDGQFVISNP-DPFFSQP-------SN 51

Query: 268 NPNGNGYEPIDNGAYYVDRP-QGRPYFKPTPFPGARGGK 381
            PNG GY+  D    +VD   Q RP  K    PGARGGK
Sbjct: 52  GPNG-GYQQPDISPAFVDNSNQYRPQ-KHYDHPGARGGK 88


>UniRef50_A5TXS5 Cluster: Putative uncharacterized protein; n=3;
           Fusobacterium nucleatum|Rep: Putative uncharacterized
           protein - Fusobacterium nucleatum subsp. polymorphum
           ATCC 10953
          Length = 520

 Score = 34.7 bits (76), Expect = 3.2
 Identities = 34/110 (30%), Positives = 47/110 (42%), Gaps = 12/110 (10%)
 Frame = +1

Query: 88  KMKFFMIFVLALLAMANAQDPVRVVEN----ADSADPFFAQPTVGNG----YEPIDNRPY 243
           K+KFFM+F L    +  AQ   + V+N      + D + ++ T  NG    Y   +N  Y
Sbjct: 3   KLKFFMLFCLFGSMLFAAQKTTKTVKNEYDLKFNPDKYVSKETEINGQKIKYRAYENIVY 62

Query: 244 IVNP-PKDYNPNGNGYEP---IDNGAYYVDRPQGRPYFKPTPFPGARGGK 381
           + NP  KDY  N N Y P    +N +         P F P    G   GK
Sbjct: 63  VKNPVDKDYQ-NMNIYIPEEYFNNSSIGSYNSNNAPIFFPNTVGGYMPGK 111


>UniRef50_UPI00015A592A Cluster: Type IV collagen alpha 4 chain;
           n=3; Danio rerio|Rep: Type IV collagen alpha 4 chain -
           Danio rerio
          Length = 1639

 Score = 34.3 bits (75), Expect = 4.2
 Identities = 17/52 (32%), Positives = 25/52 (48%)
 Frame = +1

Query: 220 EPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFKPTPFPGARG 375
           +P++++ Y++  P D  P GN   P D G   +  P G P       PGA G
Sbjct: 301 KPVESQKYVIGLPGDPGPPGNPGAPGDRGLMGIPGPSGDPGLS---LPGAMG 349


>UniRef50_A5AY32 Cluster: Putative uncharacterized protein; n=1;
           Vitis vinifera|Rep: Putative uncharacterized protein -
           Vitis vinifera (Grape)
          Length = 382

 Score = 34.3 bits (75), Expect = 4.2
 Identities = 24/61 (39%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
 Frame = +1

Query: 196 QPTVGNGYEPIDNRPYIVNPP--KDYNPNGNGYEPID--NGAYYVDRPQGRPYFKPTPFP 363
           Q   G    P DN  Y  N P    YN  G GY P D   G Y+   PQ   Y +P P P
Sbjct: 94  QQAHGGPSGPADNSGYNYNQPPASGYNQQGQGY-PQDGYGGGYHAPAPQ-PGYGQPQPIP 151

Query: 364 G 366
           G
Sbjct: 152 G 152


>UniRef50_A6SNU7 Cluster: Putative uncharacterized protein; n=1;
           Botryotinia fuckeliana B05.10|Rep: Putative
           uncharacterized protein - Botryotinia fuckeliana B05.10
          Length = 641

 Score = 33.9 bits (74), Expect = 5.5
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
 Frame = +1

Query: 142 QDPVRVVENADSADPFFAQPTVGNGYEPIDN--RPYIVNPPKDYNPNGNGYEP 294
           Q+P R    + S  P+  QP+  NGY P  N   P+ V  P    P  + ++P
Sbjct: 347 QEPQRYYTPSQSEPPYQPQPSPSNGYPPQRNGPAPFYVVAPGQQPPQSDSHQP 399


>UniRef50_Q0JQC8 Cluster: Os01g0169900 protein; n=7;
           commelinids|Rep: Os01g0169900 protein - Oryza sativa
           subsp. japonica (Rice)
          Length = 628

 Score = 33.5 bits (73), Expect = 7.3
 Identities = 23/63 (36%), Positives = 27/63 (42%), Gaps = 3/63 (4%)
 Frame = +1

Query: 196 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPI---DNGAYYVDRPQGRPYFKPTPFPG 366
           QP     Y P  + P  V PP  Y P  +G  P     N + Y + P GRP   P P  G
Sbjct: 435 QPEEAMSYAPPQSYPPNVRPPSPYMPPPSGPAPPFYGQNQSMY-EPPVGRPNSGPPPSYG 493

Query: 367 ARG 375
           A G
Sbjct: 494 AGG 496


>UniRef50_Q9VBZ2 Cluster: CG11786-PA; n=1; Drosophila
           melanogaster|Rep: CG11786-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 208

 Score = 33.5 bits (73), Expect = 7.3
 Identities = 20/64 (31%), Positives = 25/64 (39%)
 Frame = +1

Query: 169 ADSADPFFAQPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGRPYFK 348
           A  A  +   P  G  Y P  N  Y+  P  +Y P    Y P     Y    P   P++K
Sbjct: 57  ATPAPEYLPPPNNGYQYNPPPNNNYLPPPNNNYLPPPPEYGP--PAGYPSYGPPPPPFYK 114

Query: 349 PTPF 360
           P PF
Sbjct: 115 PAPF 118


>UniRef50_A0BRA8 Cluster: Chromosome undetermined scaffold_122,
           whole genome shotgun sequence; n=4; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_122,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 452

 Score = 33.5 bits (73), Expect = 7.3
 Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
 Frame = +1

Query: 199 PTVGNGYEPIDNRPYIVNPPKDYNPN-GNGYEPIDNGAYYVDRPQGRPYFKPTPFPGARG 375
           P     Y P  N  Y  N P  YNPN   GY P    +  ++ PQ +P   P   P  + 
Sbjct: 235 PNQPPNYPPNQNPNYPPNQPPGYNPNQPQGYNPNQPPSQTLNYPQNQPPNYPPNMPPNQQ 294

Query: 376 G 378
           G
Sbjct: 295 G 295


>UniRef50_A7F7C3 Cluster: Putative uncharacterized protein; n=1;
           Sclerotinia sclerotiorum 1980|Rep: Putative
           uncharacterized protein - Sclerotinia sclerotiorum 1980
          Length = 649

 Score = 33.5 bits (73), Expect = 7.3
 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
 Frame = +1

Query: 142 QDPVRVVENADSADPFFAQPTVGNGYEPIDNRP---YIVNPPKDYNPNGNGYEPIDNGAY 312
           Q+P R    +   +P + QPT  +GY P  N P   Y+V P +      +G +P   G  
Sbjct: 398 QEPQRYYTPSQQQEPPYQQPTSPSGYAPPRNGPAPFYVVAPGQQQPLQADGRQPYP-GQQ 456

Query: 313 YVDRPQGRPYFKPTPFPGARGG 378
                  +PY +  P P    G
Sbjct: 457 PQQSESQQPYPQRDPTPRIPSG 478


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 689,859,924
Number of Sequences: 1657284
Number of extensions: 12531466
Number of successful extensions: 28458
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 26887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28383
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79522270534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)