Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_D20
(851 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1062 - 30498158-30498271,30498358-30498518,30498606-304989... 140 1e-33
08_01_0871 + 8502396-8502417,8503606-8503732,8503891-8503990,850... 138 4e-33
06_03_0999 - 26752410-26752523,26752601-26752830,26752914-267531... 130 1e-30
03_03_0001 + 13611070-13611172,13611812-13611873,13612001-136120... 93 3e-19
05_01_0383 + 2990812-2990855,2991364-2991463,2991554-2991622,299... 85 7e-17
09_02_0347 + 7604466-7604622,7604809-7605146 29 4.7
01_07_0115 - 41164227-41164452,41164515-41164601,41164757-41165313 29 4.7
07_03_0105 + 13455906-13457198 29 6.2
01_07_0346 + 42889121-42890406,42896115-42896118 29 6.2
11_06_0561 - 24984960-24985205,24985283-24985354,24985906-249859... 28 8.2
09_06_0175 + 21350528-21351136 28 8.2
03_02_0616 - 9874882-9874974,9875067-9875189,9875284-9875379,987... 28 8.2
>04_04_1062 -
30498158-30498271,30498358-30498518,30498606-30498924,
30499412-30499477,30499601-30499726,30499821-30499961,
30500482-30500535,30501508-30501636,30501733-30501870,
30501993-30502061,30502135-30502203,30502468-30502623,
30503795-30503895,30503986-30504136,30504475-30504520,
30504539-30504637,30504796-30504928,30505018-30505195,
30505282-30505524,30505612-30505680,30505986-30506085,
30506898-30507007
Length = 923
Score = 140 bits (339), Expect = 1e-33
Identities = 66/136 (48%), Positives = 90/136 (66%), Gaps = 1/136 (0%)
Frame = +2
Query: 257 AGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDES 436
+G+++WRI+NF+P+PV GKFY GDSYIIL+TT+ + D+HYW+G++++QDE+
Sbjct: 37 SGLEVWRIENFKPVPVPTSSHGKFYMGDSYIILKTTALKNGSFRHDLHYWLGKDTSQDEA 96
Query: 437 GAAAILTVGLDDKFGGAAVQHRETMGHESALXLSYFQTPLTYLEGGNPSGFNHV-VTNAG 613
G AAILTV LD GG AVQ+RE G E+ LSYF+ + GG SGFNHV V
Sbjct: 97 GTAAILTVELDAALGGRAVQYREVQGGETEKLLSYFRPCIMPQPGGVASGFNHVEVNQQD 156
Query: 614 AXKRMFXVKGKRDVRV 661
R++ +GK V V
Sbjct: 157 HVTRLYVCQGKHVVHV 172
Score = 44.8 bits (101), Expect = 9e-05
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 1/121 (0%)
Frame = +2
Query: 254 TAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRT-TSDSRNNLSWDIHYWIGRESTQD 430
T +Q+WR+ ++ D K Y GD YI T T D + I W G++S ++
Sbjct: 406 TGHLQVWRVNGDGKTLLSSSDQSKLYTGDCYIFQYTYTGDDKEECL--IGTWFGKKSVEE 463
Query: 431 ESGAAAILTVGLDDKFGGAAVQHRETMGHESALXLSYFQTPLTYLEGGNPSGFNHVVTNA 610
+ +A L + A Q R G E FQ+ L +GG SG+ + +
Sbjct: 464 DRTSAISLASKMFQAAKFQAAQARLYEGKEPIQFFVIFQS-LQVFKGGLSSGYKNFIAVN 522
Query: 611 G 613
G
Sbjct: 523 G 523
>08_01_0871 +
8502396-8502417,8503606-8503732,8503891-8503990,
8504725-8504793,8504870-8505043,8505196-8505373,
8505462-8505594,8505702-8505864,8507031-8507181,
8507266-8507366,8507633-8507788,8508105-8508173,
8508256-8508324,8508403-8508540,8508639-8508767,
8509013-8509053,8510019-8510106,8510199-8510339,
8510428-8510553,8510671-8510736,8510994-8511291,
8511387-8511595,8511689-8511802
Length = 953
Score = 138 bits (335), Expect = 4e-33
Identities = 63/115 (54%), Positives = 82/115 (71%)
Frame = +2
Query: 254 TAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDE 433
T G++IWRI+NF+P+P+ GKF+ GDSYIIL+TT+ +L DIHYWIG++++QDE
Sbjct: 49 TGGLEIWRIENFKPVPIPASSYGKFFMGDSYIILKTTALKNGSLRHDIHYWIGKDTSQDE 108
Query: 434 SGAAAILTVGLDDKFGGAAVQHRETMGHESALXLSYFQTPLTYLEGGNPSGFNHV 598
SG AAILTV LD GG AVQ+RE G+E+ LSYF+ + GG SGF HV
Sbjct: 109 SGTAAILTVELDAALGGRAVQYREIQGNETDKFLSYFRPCIMPQPGGVASGFKHV 163
Score = 48.4 bits (110), Expect = 7e-06
Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Frame = +2
Query: 218 AKVHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYII--LRTTSDSRNNLSW 391
AK P A + T +Q+WRI + + I + D KFY GD YI + D L
Sbjct: 391 AKEEPQ-AYIDCTGSLQVWRINDKDKILLPSADQSKFYTGDCYIFQYMYPGDDKEECL-- 447
Query: 392 DIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALXLSYFQTPLTYLEG 571
I W G++S +++ A L + + AVQ R G E FQ+ +G
Sbjct: 448 -IGSWFGKKSIEEDRVTAISLASKMVESAKFQAVQTRLYEGKEPIQFFVIFQS-FQVFKG 505
Query: 572 GNPSGFNHVVTNAG 613
G SG+ + G
Sbjct: 506 GLSSGYKKFIAENG 519
>06_03_0999 -
26752410-26752523,26752601-26752830,26752914-26753169,
26753763-26753828,26753921-26754046,26754148-26754288,
26754377-26754387,26754523-26754670,26755326-26755454,
26755573-26755710,26755808-26755876,26755955-26756023,
26756565-26756720,26756885-26756985,26757068-26757215,
26757540-26757702,26757833-26757965,26758049-26758226,
26758330-26758572,26758664-26758732,26759063-26759187,
26759727-26759766,26760756-26760812,26762831-26762935
Length = 1004
Score = 130 bits (315), Expect = 1e-30
Identities = 61/136 (44%), Positives = 88/136 (64%), Gaps = 1/136 (0%)
Frame = +2
Query: 257 AGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDES 436
+G++IWRI+ + +PV ++ G+F+ GDSY+IL+TT+ + DIHYW+G++++QDE+
Sbjct: 76 SGLEIWRIEKLQAVPVPKESHGRFFTGDSYVILKTTALKNGSFRHDIHYWLGKDTSQDEA 135
Query: 437 GAAAILTVGLDDKFGGAAVQHRETMGHESALXLSYFQTPLTYLEGGNPSGFNHVVTNAGA 616
G AAI TV LD GG AVQ+RE G+E+ LSYF+ + EGG SGF H N
Sbjct: 136 GTAAIKTVELDAALGGRAVQYREVQGNETERFLSYFKPCIIPEEGGIASGFRHTEINERE 195
Query: 617 -XKRMFXVKGKRDVRV 661
R+F +GK V V
Sbjct: 196 HVTRLFVCRGKHTVHV 211
Score = 51.6 bits (118), Expect = 8e-07
Identities = 38/136 (27%), Positives = 56/136 (41%)
Frame = +2
Query: 254 TAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDE 433
T +Q+WR+ E ++ + KFY GD Y I + + I W G++S QDE
Sbjct: 450 TGNLQVWRVNGTEKTFLSFSEQCKFYSGDCY-IFQYSYPGEEGEECLIGTWFGKKSVQDE 508
Query: 434 SGAAAILTVGLDDKFGGAAVQHRETMGHESALXLSYFQTPLTYLEGGNPSGFNHVVTNAG 613
A + + + AV R G E A S FQ L +GG +G+ V+ G
Sbjct: 509 KTTAISVASKMVESLKFQAVMVRLYEGKEPAEFFSIFQN-LVIFKGGVSTGYKKFVSENG 567
Query: 614 AXKRMFXVKGKRDVRV 661
+ G RV
Sbjct: 568 IEDDTYSENGVALFRV 583
>03_03_0001 +
13611070-13611172,13611812-13611873,13612001-13612072,
13612158-13612394,13612473-13612650,13612731-13612863,
13613686-13613845,13613925-13614078,13614159-13614262,
13614354-13614512,13615399-13615467,13615543-13615611,
13615772-13615909,13616044-13616124,13616805-13616933,
13617717-13617864,13618007-13618017,13618094-13618234,
13618314-13618439,13619164-13619220,13619355-13619453,
13619540-13619762,13620236-13620480,13621325-13621438
Length = 1003
Score = 93.1 bits (221), Expect = 3e-19
Identities = 50/104 (48%), Positives = 62/104 (59%)
Frame = +2
Query: 350 ILRTTSDSRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESAL 529
I T S +DIH+WIG++S+QDE+G AAI TV LD GG AVQHRE G+ES
Sbjct: 54 ITTTCSKGGGAYLFDIHFWIGKDSSQDEAGTAAIKTVELDTMLGGRAVQHRELQGYESDK 113
Query: 530 XLSYFQTPLTYLEGGNPSGFNHVVTNAGAXKRMFXVKGKRDVRV 661
LSYF+ + LEGG SGF R++ KGKR +RV
Sbjct: 114 FLSYFKPCIIPLEGGFASGFK-TPEEDKFETRLYICKGKRAIRV 156
Score = 57.2 bits (132), Expect = 2e-08
Identities = 36/144 (25%), Positives = 64/144 (44%)
Frame = +2
Query: 182 ITSLSDKNARDKAKVHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRT 361
I S +A +V P G+ ++++ + + ++++GKFY GD YI+L T
Sbjct: 376 IKGASKSSAPVDEEVPPLLEGDGK---LEVYCVNGSAKTALPKEELGKFYSGDCYIVLYT 432
Query: 362 TSDSRNNLSWDIHYWIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALXLSY 541
+ + YWIG++S ++ A + + G + R G E ++
Sbjct: 433 YHSGDKREEFYLTYWIGKDSIPEDQEMAFQTANSIWNSLKGRPILGRIYQGKEPPQFIAL 492
Query: 542 FQTPLTYLEGGNPSGFNHVVTNAG 613
FQ P+ L+GG SG+ V G
Sbjct: 493 FQ-PMVILKGGISSGYQKFVEEKG 515
>05_01_0383 +
2990812-2990855,2991364-2991463,2991554-2991622,
2991724-2991960,2992045-2992228,2992307-2992442,
2992529-2992691,2992958-2993108,2993154-2993278,
2993349-2993504,2993792-2993860,2993951-2994019,
2994127-2994264,2994626-2994773,2994856-2994866,
2995212-2995352,2995441-2995569,2995860-2995899,
2996020-2996348,2996902-2996919
Length = 818
Score = 85.0 bits (201), Expect = 7e-17
Identities = 48/146 (32%), Positives = 72/146 (49%)
Frame = +2
Query: 224 VHPAFANVGRTAGVQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDSRNNLSWDIHY 403
V AF VG G+ IW I I + + GKFY G++YIIL T ++HY
Sbjct: 4 VDDAFLGVGDKPGLDIWCIMGSNLIAIEKSLHGKFYTGNTYIILSTVELKSGVRQHNVHY 63
Query: 404 WIGRESTQDESGAAAILTVGLDDKFGGAAVQHRETMGHESALXLSYFQTPLTYLEGGNPS 583
W+G E+ +++ A+ + LD G VQ+RET G ES LSYF+ + ++ G+ S
Sbjct: 64 WVGEEAKEEDCLTASDKAIELDVALGSNTVQYRETQGEESDKFLSYFKPCIIPIQ-GSLS 122
Query: 584 GFNHVVTNAGAXKRMFXVKGKRDVRV 661
+ + MF +G+ RV
Sbjct: 123 SHMRIYGDKSKDTTMFRCEGEHVARV 148
Score = 38.3 bits (85), Expect = 0.008
Identities = 27/114 (23%), Positives = 49/114 (42%)
Frame = +2
Query: 263 VQIWRIQNFEPIPVAQKDIGKFYKGDSYIILRTTSDSRNNLSWDIHYWIGRESTQDESGA 442
+++W + N + ++ + Y GD YII + + + W G S ++ A
Sbjct: 402 LKVWLVDNGSVTLLCTEEQEQLYNGDCYIIRYSYIEDGKDYHL-FFAWSGLNSINEDRVA 460
Query: 443 AAILTVGLDDKFGGAAVQHRETMGHESALXLSYFQTPLTYLEGGNPSGFNHVVT 604
AA L G+ D G AV + G E + F++ L +GG + + V+
Sbjct: 461 AASLMSGMIDSVKGHAVVAQVFEGREPEMFFLVFKS-LIIFKGGRSMAYKNFVS 513
>09_02_0347 + 7604466-7604622,7604809-7605146
Length = 164
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +1
Query: 238 CQCRQNSRCANMENTELRTNTRCSEGHRKILQRRFIHHFTDDLGQSQQSIMGYPLLDRSG 417
CQ R N + +N + +R + H ++QR F+ +T +Q + + DRSG
Sbjct: 43 CQGRSNMFKGDCKNKNM-FESRVDDLHSHLIQRGFMKGYTCWAKHGEQELGSGAVADRSG 101
Query: 418 VD 423
D
Sbjct: 102 AD 103
>01_07_0115 - 41164227-41164452,41164515-41164601,41164757-41165313
Length = 289
Score = 29.1 bits (62), Expect = 4.7
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +3
Query: 396 STTGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSSTER-PWVTK 521
ST + SRR+ + P SS +AWT A R W+TK
Sbjct: 67 STYLASSSRRRRKRPPVTSSDVAWTVEDAAIGDELRRGTWMTK 109
>07_03_0105 + 13455906-13457198
Length = 430
Score = 28.7 bits (61), Expect = 6.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 507 VSRCWTAAPPNLSSRPTVRIAAA 439
V R W +A P+L+SRP +AAA
Sbjct: 37 VCRAWRSALPSLASRPLAPVAAA 59
>01_07_0346 + 42889121-42890406,42896115-42896118
Length = 429
Score = 28.7 bits (61), Expect = 6.2
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 366 RTVATIYHGISTTGSVGSRRKTSQEPPQSSPLAWTTSSGAP 488
R+ T G +TTGSV SRR+ + + A T SS P
Sbjct: 125 RSATTKTSGAATTGSVSSRRRARRAAAVARHSAATPSSAPP 165
>11_06_0561 -
24984960-24985205,24985283-24985354,24985906-24985977,
24986612-24986782,24987464-24987653,24987733-24987976,
24988162-24988474,24988687-24989517,24989628-24989672,
24989677-24989790,24989877-24990371,24990627-24990824,
24990902-24991357
Length = 1148
Score = 28.3 bits (60), Expect = 8.2
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = +3
Query: 345 TSFYGRPRTVATIYHGISTTGSVGSRRKTSQEPPQSSPLAWTTSSGAPRSST 500
TS G PR AT +T GS R+T P QS+P T+ +PR++T
Sbjct: 104 TSVQGAPRAPATA----ATVPQGGSPRRTV--PAQSAPGGPATAQSSPRAAT 149
>09_06_0175 + 21350528-21351136
Length = 202
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/40 (45%), Positives = 18/40 (45%)
Frame = +1
Query: 409 RSGVDARRVRSRRNPHRWPGRQVRGRRGPAPRDHGSRKCF 528
R G ARRVRS R P R P RR PRD F
Sbjct: 80 RGGGGARRVRSPRTPSRPPNSTSARRR--RPRDAAGTSLF 117
>03_02_0616 -
9874882-9874974,9875067-9875189,9875284-9875379,
9875457-9875666,9875718-9875812,9876032-9876123,
9876539-9876660
Length = 276
Score = 28.3 bits (60), Expect = 8.2
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Frame = +1
Query: 241 QCRQNSRCANMENTELRTNTRCSEG-HRKILQRRFIHHFTDDLGQSQQSIMGYPLLD 408
QC S+C+ +T +R + CSE R+IL+ +H+ +L Q + ++D
Sbjct: 79 QCPLFSKCSLTIDTVIRPDNGCSENTKRQILREHNVHNQAHNLTSEQLAAREVEVVD 135
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,675,127
Number of Sequences: 37544
Number of extensions: 563317
Number of successful extensions: 1823
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1820
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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