Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_D20
         (851 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.         25   2.2  
AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.         25   2.2  
AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.         25   2.2  
AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.         25   2.2  
AJ302661-1|CAC35526.1|  128|Anopheles gambiae gSG8 protein protein.    25   2.2  
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    24   5.1  
U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase...    24   6.7  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   8.9  

>AY341187-1|AAR13751.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +3

Query: 366 RTVATIYHGISTTGSVGSRRKTSQEPPQSSPLAWTTSSGAP 488
           RT AT+    +TT +  + + T+  PP   P   T + G P
Sbjct: 116 RTKATVAPKSTTTTTTTTVKPTTTTPPPCPPTLTTFNGGQP 156


>AY341186-1|AAR13750.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +3

Query: 366 RTVATIYHGISTTGSVGSRRKTSQEPPQSSPLAWTTSSGAP 488
           RT AT+    +TT +  + + T+  PP   P   T + G P
Sbjct: 116 RTKATVAPKSTTTTTTTTVKPTTTTPPPCPPTLTTFNGGQP 156


>AY341185-1|AAR13749.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +3

Query: 366 RTVATIYHGISTTGSVGSRRKTSQEPPQSSPLAWTTSSGAP 488
           RT AT+    +TT +  + + T+  PP   P   T + G P
Sbjct: 116 RTKATVAPKSTTTTTTTTVKPTTTTPPPCPPTLTTFNGGQP 156


>AY341183-1|AAR13747.1|  189|Anopheles gambiae GNBP A1 protein.
          Length = 189

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +3

Query: 366 RTVATIYHGISTTGSVGSRRKTSQEPPQSSPLAWTTSSGAP 488
           RT AT+    +TT +  + + T+  PP   P   T + G P
Sbjct: 116 RTKATVAPKSTTTTTTTTVKPTTTTPPPCPPTLTTFNGGQP 156


>AJ302661-1|CAC35526.1|  128|Anopheles gambiae gSG8 protein protein.
          Length = 128

 Score = 25.4 bits (53), Expect = 2.2
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +2

Query: 275 RIQNF-EPIPVAQKDIGKFYKGDSYIILRTTSDSRNNLSWDI 397
           RI +F  P+P+         +GD ++ LRT++ +R  L W I
Sbjct: 3   RIVSFISPVPLFLLLSLATLRGDPFVALRTSTTNRTLLCWAI 44


>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
            precursor protein.
          Length = 1623

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
 Frame = +1

Query: 226  PSGF--CQCRQNSRCANMENTELRTNTRCSE 312
            PSG    QC Q  +C   +N E R   RC E
Sbjct: 991  PSGSKGSQCNQYGQCPCNDNVEGRRCDRCKE 1021


>U89799-1|AAD03792.1|  332|Anopheles gambiae Tc1-like transposase
           protein.
          Length = 332

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = +1

Query: 307 SEGHRKILQRRFIHHFTDDLGQSQQSI 387
           SEG+RKIL R  + +     G  +  I
Sbjct: 206 SEGYRKILSREMLPYARQQFGDEEHYI 232


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 8/17 (47%), Positives = 13/17 (76%)
 Frame = +2

Query: 332  KGDSYIILRTTSDSRNN 382
            +G+ ++ILRTT+D   N
Sbjct: 1049 QGNGHLILRTTNDQEGN 1065


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 864,802
Number of Sequences: 2352
Number of extensions: 18153
Number of successful extensions: 38
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90545769
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)