Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_D19
         (1446 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   4.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   4.2  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   7.4  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
 Frame = +3

Query: 1296 PLXLSSXPTXPASXXPHPXL--HPPXXPHPPPXXXHXQKHP 1412
            P+  SS P+      P   +  HP   PHPP    H   HP
Sbjct: 211  PISTSSLPSDFYRFSPTGLIPPHPGLSPHPP----HLSSHP 247


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.4 bits (48), Expect = 4.2
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
 Frame = +3

Query: 1296 PLXLSSXPTXPASXXPHPXL--HPPXXPHPPPXXXHXQKHP 1412
            P+  SS P+      P   +  HP   PHPP    H   HP
Sbjct: 103  PISTSSLPSDFYRFSPTGLIPPHPGLSPHPP----HLSSHP 139


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.6 bits (46), Expect = 7.4
 Identities = 9/29 (31%), Positives = 11/29 (37%)
 Frame = +3

Query: 681 PPDXXRXPXXRPPPPPTXXPPXTXPXHXP 767
           P +    P   PPPPP        P + P
Sbjct: 203 PTEDCDVPSTIPPPPPEEDDDSNIPQNNP 231


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,567
Number of Sequences: 336
Number of extensions: 1509
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 43120925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)