Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_D19
(1446 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 30 0.69
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 2.1
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 29 2.1
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 27 6.4
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 27 6.4
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 8.5
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 8.5
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 27 8.5
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 30.3 bits (65), Expect = 0.69
Identities = 25/98 (25%), Positives = 25/98 (25%), Gaps = 3/98 (3%)
Frame = +3
Query: 681 PPDXXRXPXXRPPPPPTXXPPXTXPXHXPPXSXTXXAXXRXPPSXXLXXPXTXXPXXPXX 860
PP P PPPP P H PP PP P P P
Sbjct: 209 PPPMHHKPGEHMPPPPMHHEPG---EHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMH 265
Query: 861 LXGAXIXPXPXPXTH---HHXSPXXSLQXXXXXXPXPP 965
P P P H H P P PP
Sbjct: 266 HEPGEHMP-PPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 27.5 bits (58), Expect = 4.9
Identities = 16/58 (27%), Positives = 16/58 (27%)
Frame = +3
Query: 681 PPDXXRXPXXRPPPPPTXXPPXTXPXHXPPXSXTXXAXXRXPPSXXLXXPXTXXPXXP 854
PP P PPPP P H PP PP P P P
Sbjct: 287 PPPMHHEPGEHMPPPPMHHEPG---EHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.7 bits (61), Expect = 2.1
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = +3
Query: 1308 SSXPTXPASXXPHPXLHPPXXPHPPPXXXHXQK 1406
S P P P P PP P PPP + +K
Sbjct: 3 SLPPGNPPPPPPPPGFEPPSQPPPPPPPGYVKK 35
Score = 27.9 bits (59), Expect = 3.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 714 PPPPPTXXPPXTXPXHXPP 770
PPPPP PP P PP
Sbjct: 12 PPPPPGFEPPSQPPPPPPP 30
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 28.7 bits (61), Expect = 2.1
Identities = 18/65 (27%), Positives = 19/65 (29%)
Frame = +3
Query: 702 PXXRPPPPPTXXPPXTXPXHXPPXSXTXXAXXRXPPSXXLXXPXTXXPXXPXXLXGAXIX 881
P PP P PP P P A PPS + P L A
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPA 475
Query: 882 PXPXP 896
P P P
Sbjct: 476 PPPAP 480
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 27.1 bits (57), Expect = 6.4
Identities = 12/34 (35%), Positives = 14/34 (41%)
Frame = +3
Query: 1311 SXPTXPASXXPHPXLHPPXXPHPPPXXXHXQKHP 1412
S P P + HP PP HPP H +P
Sbjct: 159 SCPPFPPTQHHHPHTRPPH--HPPHPHFHNNNYP 190
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.1 bits (57), Expect = 6.4
Identities = 19/70 (27%), Positives = 23/70 (32%)
Frame = +3
Query: 681 PPDXXRXPXXRPPPPPTXXPPXTXPXHXPPXSXTXXAXXRXPPSXXLXXPXTXXPXXPXX 860
PP P P P+ PP P PP + PP + P + P P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPP--PVPAPSSEIPSIPAP 1079
Query: 861 LXGAXIXPXP 890
GA P P
Sbjct: 1080 -SGAPPVPAP 1088
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.6 bits (56), Expect = 8.5
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 1340 PAPXPPPXXXXPPPPTXXPXTKTP 1411
P P PPP PPPP+ P P
Sbjct: 1705 PTPPPPPM-SVPPPPSAPPMPAGP 1727
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 8.5
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 681 PPDXXRXPXXRPPPPPTXXPPXTXPXHXPPXS 776
P P PPPPPT P T P S
Sbjct: 229 PKQADPLPAPPPPPPPTLPPQSTNTSQLPMPS 260
Score = 26.6 bits (56), Expect = 8.5
Identities = 12/25 (48%), Positives = 13/25 (52%)
Frame = +2
Query: 1340 PAPXPPPXXXXPPPPTXXPXTKTPS 1414
P P PPP PPPPT P + S
Sbjct: 234 PLPAPPP----PPPPTLPPQSTNTS 254
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 26.6 bits (56), Expect = 8.5
Identities = 11/33 (33%), Positives = 11/33 (33%)
Frame = +2
Query: 1298 PXPXFXPHXXXLXXPAPXPPPXXXXPPPPTXXP 1396
P P P P P P PPPP P
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,711,649
Number of Sequences: 5004
Number of extensions: 17218
Number of successful extensions: 198
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 141
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 806794268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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