Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_D18
         (912 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058605-1|AAL13834.1|  585|Drosophila melanogaster LD29807p pro...    31   2.9  
AE014134-1406|AAF52606.2|  585|Drosophila melanogaster CG8668-PA...    31   2.9  
Y00228-1|CAA68371.1|  944|Drosophila melanogaster protein ( Dros...    29   8.8  
BT003273-1|AAO25030.1|  941|Drosophila melanogaster LD15893p pro...    29   8.8  
AE014297-1834|AAF55043.1|  941|Drosophila melanogaster CG8573-PB...    29   8.8  
AE014297-1833|AAF55044.1|  941|Drosophila melanogaster CG8573-PA...    29   8.8  

>AY058605-1|AAL13834.1|  585|Drosophila melanogaster LD29807p
           protein.
          Length = 585

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 280 PETMVVSRSDDAETEATLDVXTVTEGPVQPIKLTKMDVKS 399
           PE+ V+    +A+ EA + +    + PV P+K TK  V S
Sbjct: 264 PESKVIQEIKEAKKEAAVPLPKSAKPPVPPVKTTKSKVPS 303


>AE014134-1406|AAF52606.2|  585|Drosophila melanogaster CG8668-PA
           protein.
          Length = 585

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 280 PETMVVSRSDDAETEATLDVXTVTEGPVQPIKLTKMDVKS 399
           PE+ V+    +A+ EA + +    + PV P+K TK  V S
Sbjct: 264 PESKVIQEIKEAKKEAAVPLPKSAKPPVPPVKTTKSKVPS 303


>Y00228-1|CAA68371.1|  944|Drosophila melanogaster protein (
           Drosophila melanogastersu(Hw) gene for suppressor of
           hairy wing. ).
          Length = 944

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +3

Query: 357 TCSTNKTDEDGCEVRDIYAIRSHGLL*RMCEMLQTN-LKKPTLGCXSPNTAFIS 515
           +CS+N+TD   C+V D    R   L   + + L T  +KKP   C +    F S
Sbjct: 371 SCSSNETDTMSCKVCDRVFYRLDNLRSHLKQHLGTQVVKKPEYMCHTCKNCFYS 424


>BT003273-1|AAO25030.1|  941|Drosophila melanogaster LD15893p
           protein.
          Length = 941

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +3

Query: 357 TCSTNKTDEDGCEVRDIYAIRSHGLL*RMCEMLQTN-LKKPTLGCXSPNTAFIS 515
           +CS+N+TD   C+V D    R   L   + + L T  +KKP   C +    F S
Sbjct: 371 SCSSNETDTMSCKVCDRVFYRLDNLRSHLKQHLGTQVVKKPEYMCHTCKNCFYS 424


>AE014297-1834|AAF55043.1|  941|Drosophila melanogaster CG8573-PB,
           isoform B protein.
          Length = 941

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +3

Query: 357 TCSTNKTDEDGCEVRDIYAIRSHGLL*RMCEMLQTN-LKKPTLGCXSPNTAFIS 515
           +CS+N+TD   C+V D    R   L   + + L T  +KKP   C +    F S
Sbjct: 371 SCSSNETDTMSCKVCDRVFYRLDNLRSHLKQHLGTQVVKKPEYMCHTCKNCFYS 424


>AE014297-1833|AAF55044.1|  941|Drosophila melanogaster CG8573-PA,
           isoform A protein.
          Length = 941

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
 Frame = +3

Query: 357 TCSTNKTDEDGCEVRDIYAIRSHGLL*RMCEMLQTN-LKKPTLGCXSPNTAFIS 515
           +CS+N+TD   C+V D    R   L   + + L T  +KKP   C +    F S
Sbjct: 371 SCSSNETDTMSCKVCDRVFYRLDNLRSHLKQHLGTQVVKKPEYMCHTCKNCFYS 424


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,720,482
Number of Sequences: 53049
Number of extensions: 722750
Number of successful extensions: 1688
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1685
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4464466254
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)