Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_D17
(900 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC26A3.04 |rpl2002|rpl20, rpl20-2|60S ribosomal protein L20|Sc... 176 4e-45
SPAC3A12.10 |rpl2001|rpl20-1, rpl20, yl17b, rpl18a-2|60S ribosom... 176 4e-45
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 28 1.6
SPAC57A7.08 |pzh1||serine/threonine protein phosphatase Pzh1|Sch... 27 2.7
SPCC1682.14 |rpl1902|rpl19-2|60S ribosomal protein L19B|Schizosa... 26 6.3
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 26 8.4
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 26 8.4
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 26 8.4
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 26 8.4
SPBC56F2.02 |rpl1901|rpl19-1|60S ribosomal protein L19|Schizosac... 26 8.4
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 26 8.4
SPAC22F3.04 |mug62||AMP binding enzyme |Schizosaccharomyces pomb... 26 8.4
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 26 8.4
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 26 8.4
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 26 8.4
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 26 8.4
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 26 8.4
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 26 8.4
>SPAC26A3.04 |rpl2002|rpl20, rpl20-2|60S ribosomal protein
L20|Schizosaccharomyces pombe|chr 1|||Manual
Length = 176
Score = 176 bits (428), Expect = 4e-45
Identities = 89/174 (51%), Positives = 114/174 (65%), Gaps = 4/174 (2%)
Frame = +3
Query: 84 LREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXX 263
L+EY+V+GRK+P+E+EP P L++MR+F+P+ VAKSR+WYFL+ + K KK TGEIV
Sbjct: 3 LKEYQVVGRKVPTEHEPVPKLFRMRLFAPNESVAKSRYWYFLKMINKVKKATGEIVAINE 62
Query: 264 XXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQI 443
FGIW+RY+SRSG HNMY+E+RD + GAV Y DM ARHRAR SI+I
Sbjct: 63 ISEPKPLKAKVFGIWIRYDSRSGTHNMYKEFRDTTRVGAVEAMYADMAARHRARFRSIRI 122
Query: 444 IK-VEVIKAAACRRPQVKQFHNSTIRFPLPKR---VHHYKRLNTFAYKRPSTYF 593
+K VEV K RR VKQ N ++FPLP R V FA RPST++
Sbjct: 123 LKVVEVEKKEDVRRNYVKQLLNPHLKFPLPHRRTGVVGLAGKKVFAPHRPSTFY 176
>SPAC3A12.10 |rpl2001|rpl20-1, rpl20, yl17b, rpl18a-2|60S ribosomal
protein L20a|Schizosaccharomyces pombe|chr 1|||Manual
Length = 176
Score = 176 bits (428), Expect = 4e-45
Identities = 89/174 (51%), Positives = 114/174 (65%), Gaps = 4/174 (2%)
Frame = +3
Query: 84 LREYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWYFLRQLKKFKKTTGEIVXXXX 263
L+EY+V+GRK+P+E+EP P L++MR+F+P+ VAKSR+WYFL+ + K KK TGEIV
Sbjct: 3 LKEYQVVGRKVPTEHEPVPKLFRMRLFAPNESVAKSRYWYFLKMINKVKKATGEIVAINE 62
Query: 264 XXXXXXXXXXNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQI 443
FGIW+RY+SRSG HNMY+E+RD + GAV Y DM ARHRAR SI+I
Sbjct: 63 ISEPKPLKAKVFGIWIRYDSRSGTHNMYKEFRDTTRVGAVEAMYADMAARHRARFRSIRI 122
Query: 444 IK-VEVIKAAACRRPQVKQFHNSTIRFPLPKR---VHHYKRLNTFAYKRPSTYF 593
+K VEV K RR VKQ N ++FPLP R V FA RPST++
Sbjct: 123 LKVVEVEKKEDVRRNYVKQLLNPHLKFPLPHRRTGVVGLAGKKVFAPHRPSTFY 176
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 28.3 bits (60), Expect = 1.6
Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 3/81 (3%)
Frame = +1
Query: 91 NMRLSAVSSRRRTSPNLPCIK*EFSLRIQLSPNLVSGIS*DNLRSSRRPLVKLSLLRKFQ 270
N+ + +V R S I S ++ P++V S D+ + SRRP + S RKF
Sbjct: 271 NITVESVRGFLRDSSKPDNIMDSPSPKVSKRPSIVRQDSHDSNKLSRRPTINTSFDRKFS 330
Query: 271 RK---APSRLRILVSGYAMSL 324
K PS + L G SL
Sbjct: 331 PKLTRTPSLTKSLDPGTPTSL 351
>SPAC57A7.08 |pzh1||serine/threonine protein phosphatase
Pzh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 515
Score = 27.5 bits (58), Expect = 2.7
Identities = 19/71 (26%), Positives = 29/71 (40%)
Frame = +2
Query: 344 VP*IP*PECRWSCHSVLQRYGS*TQSPSSFNTDYQSGSNQGCCVSPSTGQTVPQQHHQIP 523
+P P P + +VLQ++ SS + SNQ +SPST + HH
Sbjct: 68 LPPPPSPGILATSPAVLQKHQQEDSGNSSQSPTSPHPSNQPAMLSPSTAASQHHHHHSSS 127
Query: 524 IAQTCAPLQET 556
+ +P T
Sbjct: 128 SSYAVSPTSPT 138
>SPCC1682.14 |rpl1902|rpl19-2|60S ribosomal protein
L19B|Schizosaccharomyces pombe|chr 3|||Manual
Length = 193
Score = 26.2 bits (55), Expect = 6.3
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +1
Query: 169 RIQLSPNLVSGIS*DNLRSSRRPLVKLSLLRKFQRKAPSRLRI 297
++ + PN +S IS N R + R LVK L+ + SR RI
Sbjct: 21 KVWMDPNEISEISNANSRQNIRKLVKDGLVIRKPNLMHSRFRI 63
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.4
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 9 LPTHYREFLKICFQIKTPKMKAKGQLREYEV----IGRKLPSENEPKPP 143
LP Y+EF I + T K+ + E+EV +LP N P PP
Sbjct: 374 LPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPP 422
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.4
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 9 LPTHYREFLKICFQIKTPKMKAKGQLREYEV----IGRKLPSENEPKPP 143
LP Y+EF I + T K+ + E+EV +LP N P PP
Sbjct: 374 LPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPP 422
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.4
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 9 LPTHYREFLKICFQIKTPKMKAKGQLREYEV----IGRKLPSENEPKPP 143
LP Y+EF I + T K+ + E+EV +LP N P PP
Sbjct: 374 LPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPP 422
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.4
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 9 LPTHYREFLKICFQIKTPKMKAKGQLREYEV----IGRKLPSENEPKPP 143
LP Y+EF I + T K+ + E+EV +LP N P PP
Sbjct: 374 LPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPP 422
>SPBC56F2.02 |rpl1901|rpl19-1|60S ribosomal protein
L19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 193
Score = 25.8 bits (54), Expect = 8.4
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 169 RIQLSPNLVSGIS*DNLRSSRRPLVKLSLLRKFQRKAPSRLRI 297
++ + PN +S IS N R + R L+K L+ + SR RI
Sbjct: 21 KVWMDPNEISEISNANSRQNVRKLIKDGLVIRKPNLMHSRFRI 63
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.4
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 9 LPTHYREFLKICFQIKTPKMKAKGQLREYEV----IGRKLPSENEPKPP 143
LP Y+EF I + T K+ + E+EV +LP N P PP
Sbjct: 374 LPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPP 422
>SPAC22F3.04 |mug62||AMP binding enzyme |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1428
Score = 25.8 bits (54), Expect = 8.4
Identities = 11/39 (28%), Positives = 19/39 (48%)
Frame = +3
Query: 87 REYEVIGRKLPSENEPKPPLYKMRIFSPDPIVAKSRFWY 203
+E V+ + E P +R +SP+ ++ S FWY
Sbjct: 470 QEILVLKSSIEKEKVEIVPFLDIRKYSPNEVLCMSPFWY 508
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.4
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 9 LPTHYREFLKICFQIKTPKMKAKGQLREYEV----IGRKLPSENEPKPP 143
LP Y+EF I + T K+ + E+EV +LP N P PP
Sbjct: 374 LPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPP 422
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.4
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 9 LPTHYREFLKICFQIKTPKMKAKGQLREYEV----IGRKLPSENEPKPP 143
LP Y+EF I + T K+ + E+EV +LP N P PP
Sbjct: 374 LPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPP 422
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.4
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 9 LPTHYREFLKICFQIKTPKMKAKGQLREYEV----IGRKLPSENEPKPP 143
LP Y+EF I + T K+ + E+EV +LP N P PP
Sbjct: 374 LPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPP 422
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.4
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 9 LPTHYREFLKICFQIKTPKMKAKGQLREYEV----IGRKLPSENEPKPP 143
LP Y+EF I + T K+ + E+EV +LP N P PP
Sbjct: 374 LPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPP 422
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.4
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 9 LPTHYREFLKICFQIKTPKMKAKGQLREYEV----IGRKLPSENEPKPP 143
LP Y+EF I + T K+ + E+EV +LP N P PP
Sbjct: 374 LPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPP 422
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 25.8 bits (54), Expect = 8.4
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 9 LPTHYREFLKICFQIKTPKMKAKGQLREYEV----IGRKLPSENEPKPP 143
LP Y+EF I + T K+ + E+EV +LP N P PP
Sbjct: 374 LPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQENYRLPIRNYPLPP 422
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,443,360
Number of Sequences: 5004
Number of extensions: 68340
Number of successful extensions: 165
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 161
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 454497130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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