Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_D16
(920 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6F6.07c |rps13||40S ribosomal protein S13|Schizosaccharomyce... 111 2e-25
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 40 5e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 38 0.002
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 37 0.004
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.019
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.033
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 33 0.075
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 32 0.100
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 31 0.17
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 28 0.20
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 31 0.23
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 0.63
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 1.2
SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces... 27 4.9
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 26 6.5
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 26 8.6
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 26 8.6
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 8.6
>SPAC6F6.07c |rps13||40S ribosomal protein S13|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 151
Score = 111 bits (266), Expect = 2e-25
Identities = 59/142 (41%), Positives = 74/142 (52%)
Frame = +1
Query: 61 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIYKLGKKGLTPSQIGVMLRDSHGV 240
MGRMH+ GKGI+ SALPY RS P W K AD V EQI K KKG++PSQIGV LRDSHG+
Sbjct: 1 MGRMHSKGKGIASSALPYVRSPPAWCKADADSVVEQILKFSKKGMSPSQIGVTLRDSHGI 60
Query: 241 AQVRFVTGKKILRYHEXXXXXXXXXXXXXXPDQESCCNEKALGTXXXXXXXXXXAYFSRX 420
QVRF+TG+KI+R + +++ K L
Sbjct: 61 PQVRFITGQKIMRILKANGLAPELPEDLYNLIKKAVSVRKHLERNRKDKDSKFRLILIES 120
Query: 421 QDSQTGPLLQTKSVLPPNWKYE 486
+ + + LPP WKYE
Sbjct: 121 RIHRLARYYRKVGALPPTWKYE 142
Score = 101 bits (243), Expect = 1e-22
Identities = 47/57 (82%), Positives = 53/57 (92%)
Frame = +2
Query: 281 IMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVXSRIHRLAXYYK 451
I+KA GLAP+LPEDLY LIKKAV++RKHLERNRKDKDSKFRLIL+ SRIHRLA YY+
Sbjct: 74 ILKANGLAPELPEDLYNLIKKAVSVRKHLERNRKDKDSKFRLILIESRIHRLARYYR 130
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 39.9 bits (89), Expect = 5e-04
Identities = 15/30 (50%), Positives = 15/30 (50%)
Frame = +2
Query: 539 PXPXPXXPPPPPPXPPXPXXPPXXPPXXXP 628
P P P PPPP PP P PP PP P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 38.7 bits (86), Expect = 0.001
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +3
Query: 546 PPPXXXPXXPPPPPXPPXPPXXPPXPXPXPS 638
PPP P P PP P PP PP P P S
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPPLPASS 1739
Score = 37.5 bits (83), Expect = 0.003
Identities = 15/31 (48%), Positives = 15/31 (48%)
Frame = +3
Query: 546 PPPXXXPXXPPPPPXPPXPPXXPPXPXPXPS 638
PP P PPPP P PP PP P PS
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPS 1729
Score = 35.5 bits (78), Expect = 0.011
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = +3
Query: 537 PLXPPPXXXPXXPPPPPXPPXPPXXPPXPXPXPSP 641
P PPP P PPPP P P PP P P P
Sbjct: 1705 PTPPPP---PMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 32.3 bits (70), Expect = 0.100
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 544 PXPPXPXPXXPXPPXPXXPPXXPPXXXAPXLPLS 645
P PP P P PP P PP P LP S
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPAS 1738
Score = 30.3 bits (65), Expect = 0.40
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +3
Query: 546 PPPXXXPXXPPPPPXPPXPPXXPPXPXPXPSP 641
PPP P P PP P PP P+P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 29.5 bits (63), Expect = 0.70
Identities = 15/40 (37%), Positives = 17/40 (42%), Gaps = 4/40 (10%)
Frame = +3
Query: 534 YPLXPPPXXXPXXPPPP---PXPPXPPX-XPPXPXPXPSP 641
+P+ PP PP P PP PP PP P P P
Sbjct: 1685 HPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP 1724
Score = 29.5 bits (63), Expect = 0.70
Identities = 15/39 (38%), Positives = 16/39 (41%), Gaps = 4/39 (10%)
Frame = +1
Query: 535 TPXPXPPXPXPXXPXPPXPXXPPXXPP----XXXAPXLP 639
TP P P P PP P PP PP AP +P
Sbjct: 1706 TPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/31 (35%), Positives = 11/31 (35%)
Frame = +2
Query: 536 PPXPXPXXPPPPPPXPPXPXXPPXXPPXXXP 628
PP P P PP PP P P P
Sbjct: 1716 PPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 25.8 bits (54), Expect = 8.6
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +3
Query: 705 PPPXSXXPPPXXXPFSPXPRXP 770
PPP S P P P +P P P
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLP 1736
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 38.3 bits (85), Expect = 0.002
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +3
Query: 546 PPPXXXPXXPPPPPXPPXPPXXPPXPXPXPSP 641
PPP PPPPP PP P P P P P
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 35.9 bits (79), Expect = 0.008
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = +3
Query: 537 PLXPPPXXXPXXPPPPPXPPXPPXXPPXPXPXPSPFXXG 653
P+ PP PPPPP P PP P P P G
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG 788
Score = 33.9 bits (74), Expect = 0.033
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = +3
Query: 573 PPPPPXPPXPPXXPPXPXPXPSPFXXGXXXXXXXXXXXLAXXXGPPPXSXXPP 731
PPPPP P P P P P P +A GPPP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVA-GAGPPPPPPPPP 783
Score = 30.7 bits (66), Expect = 0.30
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 4/37 (10%)
Frame = +3
Query: 537 PLXPPPXXXPXXPPPPPXPPXPP----XXPPXPXPXP 635
P PPP P P P P PP PP P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 30.3 bits (65), Expect = 0.40
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 704 PPPPXXXXPPXQXXFFAXPXXTXXXPLRXPPFTPAQKXFPXXPPPPPPXP 853
PPPP P P PP P PPPPPP P
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.3 bits (65), Expect = 0.40
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 537 PLXPPPXXXPXXPPPPPXPPXPPXXPPXPXPXPSP 641
P+ PP PPPP PP P P P P
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 30.3 bits (65), Expect = 0.40
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 5/35 (14%)
Frame = +2
Query: 527 ITXPPXPXPXXPPPPPPXPP-----XPXXPPXXPP 616
I PP PPPPP PP P PP PP
Sbjct: 749 IPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.9 bits (64), Expect = 0.53
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 539 PXPXPXXPPPPPPXPPXPXXPPXXPP 616
P P P P PPP P PP PP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 29.1 bits (62), Expect = 0.93
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 527 ITXPPXPXPXXPPPPPPXPPXPXXPPXXP 613
I P P P PPP P P PP P
Sbjct: 740 IVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 27.5 bits (58), Expect = 2.8
Identities = 17/43 (39%), Positives = 18/43 (41%), Gaps = 9/43 (20%)
Frame = +3
Query: 540 LXPPPXXXPXXPPPPPXP----PXPPXXPP-----XPXPXPSP 641
+ P P P P PPP P P PP PP P P P P
Sbjct: 740 IVPTPAPAPI-PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 37.1 bits (82), Expect = 0.004
Identities = 22/68 (32%), Positives = 22/68 (32%), Gaps = 2/68 (2%)
Frame = +3
Query: 537 PLXPPPXXXPXXPPPPPX--PPXPPXXPPXPXPXPSPFXXGXXXXXXXXXXXLAXXXGPP 710
P PP P PPP P PP P PP P P P L P
Sbjct: 140 PTSAPPR--PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPM 197
Query: 711 PXSXXPPP 734
P PPP
Sbjct: 198 PPKVPPPP 205
Score = 28.7 bits (61), Expect = 1.2
Identities = 27/100 (27%), Positives = 30/100 (30%), Gaps = 1/100 (1%)
Frame = +2
Query: 563 PPPPPXPPXPXXPPXXPPXXXPXXFPFXXXXXXXXXXXQTPLGXXXGPPPPXXXXPPXQX 742
PP P PP P PP P P PP P PP Q
Sbjct: 124 PPSAPAPPTPQSE-LRPPTSAPPR-----PSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Query: 743 XFFAXPXXTXXXPLRXPPFTPA-QKXFPXXPPPPPPXPXS 859
P++ PP P+ P PP PP P S
Sbjct: 178 A----------APVKSPPSAPSLPSAVPPMPPKVPPPPLS 207
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Frame = +2
Query: 545 PXPXXPPPPPP-XPPXPXXPPXXPPXXXPXXFP 640
P P PPP P PP P P P P P
Sbjct: 145 PRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +3
Query: 549 PPXXXPXXPPPPPXPPXPPXXPPXPXPXP 635
PP PP PP P PP P P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAP 158
Score = 26.2 bits (55), Expect = 6.5
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 573 PPPPPXPPXPPXXPPXP 623
PPPPP P P P P
Sbjct: 5 PPPPPPAPAPAAAAPAP 21
Score = 25.8 bits (54), Expect = 8.6
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 560 PPPPPPXPPXPXXPPXXP 613
PPPPPP P P P
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
Score = 25.8 bits (54), Expect = 8.6
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +2
Query: 563 PPPPPXPPXPXXPPXXPP 616
PPPPP P P PP
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 34.7 bits (76), Expect = 0.019
Identities = 30/115 (26%), Positives = 31/115 (26%), Gaps = 8/115 (6%)
Frame = +2
Query: 527 ITXPPXPXPXXPPPPPP----XPPXPXXPPXXPPXXXPXXFPFXXXXXXXXXXXQTPLGX 694
+ PP P P PP P PP P PP P P P G
Sbjct: 1099 VAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGA 1158
Query: 695 XXGPPP--PXXXXPPXQXXFFAXPXXTXXXPLRXPP--FTPAQKXFPXXPPPPPP 847
P P P P P PP P K PP PPP
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 34.3 bits (75), Expect = 0.025
Identities = 31/112 (27%), Positives = 32/112 (28%), Gaps = 8/112 (7%)
Frame = +2
Query: 536 PPXPXPXX-PPPPPP---XPPXPXXPPXXPPXXXPXXFPFXXXXXXXXXXXQTPLGXXXG 703
PP P P PP P P PP P PP P P P G
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPV 1142
Query: 704 PPPPXXXXP-PXQXXFFAXPXXTXXXPLRXPP---FTPAQKXFPXXPPPPPP 847
P P P P P + P P P K PP PPP
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 31.9 bits (69), Expect = 0.13
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 1/35 (2%)
Frame = +3
Query: 537 PLXPPPXXXPXXPPPPPX-PPXPPXXPPXPXPXPS 638
P PPP P P P PP PP P P PS
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPS 1223
Score = 29.5 bits (63), Expect = 0.70
Identities = 31/113 (27%), Positives = 32/113 (28%), Gaps = 5/113 (4%)
Frame = +2
Query: 530 TXPPXPXPXXPPPPPPXPPXPXXPPXXPPXXXPXXFPFXXXXXXXXXXXQTPLGXXXGPP 709
T PP P P PP P P PP P P P+ G P
Sbjct: 1039 TAPPVPIP---TSTPPVPKSSSGAPSAPP---PVPAPSSEIPSIPAPSGAPPVPAPSGIP 1092
Query: 710 P---PXXXXPPXQXXFFAXPXXTXXXPLRXPPFTPAQKXFPXXPPP--PPPXP 853
P P PP A P P PP P P P PP P
Sbjct: 1093 PVPKPSVAAPPVPKPSVAVP--PVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Score = 29.1 bits (62), Expect = 0.93
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Frame = +2
Query: 536 PPXPXP--XXPPPPPP--XPPXPXXPPXXPPXXXP 628
PP P P PP PPP PP P PP P
Sbjct: 1198 PPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 4/35 (11%)
Frame = +3
Query: 537 PLXPPPXXXPXXPPP----PPXPPXPPXXPPXPXP 629
P PPP P P P PP P PP P P
Sbjct: 1208 PPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 27.5 bits (58), Expect = 2.8
Identities = 25/105 (23%), Positives = 30/105 (28%), Gaps = 1/105 (0%)
Frame = +2
Query: 536 PPXPXPXXPPPPPPXPPXPXXPPXXPPXXXPXXFPFXXXXXXXXXXXQTPLGXXXGPPPP 715
PP P PP P P P P P P ++ G PPP
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIP-----TSTPPVPKSSSGAPSAPPP- 1065
Query: 716 XXXXPPXQXXFFAXPXXTXXXPLRXPP-FTPAQKXFPXXPPPPPP 847
P + P + P+ P P K PP P P
Sbjct: 1066 ---VPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKP 1107
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/38 (34%), Positives = 15/38 (39%), Gaps = 3/38 (7%)
Frame = +1
Query: 538 PXPXPPXPXP---XXPXPPXPXXPPXXPPXXXAPXLPL 642
P PP P P P PP PP P P +P+
Sbjct: 1194 PSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPV 1231
Score = 27.1 bits (57), Expect = 3.7
Identities = 20/79 (25%), Positives = 20/79 (25%), Gaps = 1/79 (1%)
Frame = +3
Query: 537 PLXPPPXXXPXXPPPPPXPPXPPXXPPXPXPXPSPFXXGXXXXXXXXXXXLAXXXGP-PP 713
P PP P PP P P P P PS P P
Sbjct: 1037 PSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPK 1096
Query: 714 XSXXPPPXXXPFSPXPRXP 770
S PP P P P
Sbjct: 1097 PSVAAPPVPKPSVAVPPVP 1115
Score = 26.6 bits (56), Expect = 4.9
Identities = 28/110 (25%), Positives = 30/110 (27%), Gaps = 7/110 (6%)
Frame = +2
Query: 536 PPXPXPXXPPPPPPXPPXPXXPPXXPPXXXPXXFPF--XXXXXXXXXXXQTP----LGXX 697
P P PPP P P PP P P + P L
Sbjct: 961 PRPAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSK 1020
Query: 698 XGPPP-PXXXXPPXQXXFFAXPXXTXXXPLRXPPFTPAQKXFPXXPPPPP 844
P P P PP A P P PP + P PPP P
Sbjct: 1021 APPVPLPSADAPPIPVPSTAPP---VPIPTSTPPVPKSSSGAPSAPPPVP 1067
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +2
Query: 530 TXPPXPXPXXPPPPPPXPPXPXXPPXXPPXXXP 628
T PP P P PP P P P P P
Sbjct: 1215 TAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAP 1247
Score = 26.2 bits (55), Expect = 6.5
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +1
Query: 544 PXPPXPXPXXPXPPXPXXPPXXPPXXXAPXLPLSXXG 654
P P P P P P PP AP +P G
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAG 1225
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.9 bits (74), Expect = 0.033
Identities = 34/122 (27%), Positives = 35/122 (28%), Gaps = 16/122 (13%)
Frame = +2
Query: 536 PPXPXPXXPPP----PPPX--------PPXPXXPPXXPPXXXPXXFPFXXXXXXXXXXXQ 679
PP P P P PPP PP P PP P P P
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAP--PPAIPGRSAPALPPLGNASRTSTPPVP 418
Query: 680 TPLGXXXGPPP--PXXXXPPXQXXFFAXPXXTXXXPLRXP--PFTPAQKXFPXXPPPPPP 847
TP PP P P A P P+ P PA P P PPP
Sbjct: 419 TPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Query: 848 XP 853
P
Sbjct: 479 AP 480
Score = 33.9 bits (74), Expect = 0.033
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +3
Query: 537 PLXPP-PXXXPXXPPPPPXPPXPPXXPPXPXPXPS 638
P+ PP P P PP PP P P PP P P P+
Sbjct: 454 PIAPPLPAGMPAAPPLPPAAPAP---PPAPAPAPA 485
Score = 31.5 bits (68), Expect = 0.17
Identities = 13/34 (38%), Positives = 14/34 (41%)
Frame = +3
Query: 537 PLXPPPXXXPXXPPPPPXPPXPPXXPPXPXPXPS 638
P PP P PP PP P PP P P+
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPA 465
Score = 31.1 bits (67), Expect = 0.23
Identities = 17/39 (43%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
Frame = +3
Query: 537 PLXPP-PXXXPXXPP-PPPXPPXPPXXP--PXPXPXPSP 641
P PP P P PP P P PP P P P P P+P
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 30.7 bits (66), Expect = 0.30
Identities = 14/37 (37%), Positives = 16/37 (43%), Gaps = 2/37 (5%)
Frame = +3
Query: 537 PLXPP--PXXXPXXPPPPPXPPXPPXXPPXPXPXPSP 641
P+ P P P P PP P P PP P P+P
Sbjct: 440 PMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Score = 29.9 bits (64), Expect = 0.53
Identities = 30/96 (31%), Positives = 31/96 (32%), Gaps = 2/96 (2%)
Frame = +2
Query: 572 PPXPPXPXXPPXXPPXXXPXXFPFXXXXXXXXXXXQTPLGXXXGPP--PPXXXXPPXQXX 745
PP P P PP PP P P P+G PP P PP
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPP------------SLPMGAPAAPPLPPSAPIAPPLPAG 462
Query: 746 FFAXPXXTXXXPLRXPPFTPAQKXFPXXPPPPPPXP 853
A P PL PP PA P P P P P
Sbjct: 463 MPAAP------PL--PPAAPAP---PPAPAPAPAAP 487
Score = 27.1 bits (57), Expect = 3.7
Identities = 28/116 (24%), Positives = 30/116 (25%), Gaps = 8/116 (6%)
Frame = +2
Query: 536 PPXPXPXXPPPPPPXPPXPXXPPXXPPXXXPXXFPFXXXXXXXXXXXQTPLGXXXGPPPP 715
PP PP P P PP PP P P PP
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPP- 291
Query: 716 XXXXPPXQXXFFAXPXXTXXXPLRXPPFTPAQKXFPXXP--------PPPPPXPXS 859
PP A P PP + + P PPPPP P S
Sbjct: 292 --LPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRS 345
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 536 PPXPXPXXPPPPPPXPPXPXXP 601
PP P P P PPP P P P
Sbjct: 467 PPLP-PAAPAPPPAPAPAPAAP 487
Score = 26.2 bits (55), Expect = 6.5
Identities = 17/58 (29%), Positives = 20/58 (34%), Gaps = 8/58 (13%)
Frame = +3
Query: 564 PXXPPPP--------PXPPXPPXXPPXPXPXPSPFXXGXXXXXXXXXXXLAXXXGPPP 713
P PPPP P PP PP P P +P G ++ PPP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP-STGRQPPPLSSSRAVSNPPAPPP 393
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 32.7 bits (71), Expect = 0.075
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -2
Query: 634 GXGXGXGGXXGGXGGXGGGGGXXGXXXGGGXRG 536
G G GG GG GG GG G G GG G
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGG 38
Score = 31.5 bits (68), Expect = 0.17
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -2
Query: 634 GXGXGXGGXXGGXGGXGGGGGXXGXXXGGGXRG 536
G G GG GG GG GGG G G G RG
Sbjct: 20 GFNGGRGGFGGGRGG-ARGGGRGGARGGRGGRG 51
Score = 30.7 bits (66), Expect = 0.30
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -3
Query: 642 KGKXXGXXXGGXXGGXXGXGGXGGGGGGXXGXGXGGXVI 526
+G G GG G GG GG GG G G VI
Sbjct: 36 RGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGAKVI 74
Score = 29.9 bits (64), Expect = 0.53
Identities = 17/37 (45%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = -2
Query: 640 GEGXGXGXGGXXGGX-GGXGG-GGGXXGXXXGGGXRG 536
G G G GG GG GG GG GG G G RG
Sbjct: 29 GGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = -2
Query: 634 GXGXGXGGXXGGXGGXGGGGGXXGXXXGGGXRG 536
G G GG G GG G GG G GG RG
Sbjct: 24 GRGGFGGGRGGARGG-GRGGARGGRGGRGGARG 55
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 32.3 bits (70), Expect = 0.100
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +2
Query: 536 PPXPXPXXPPPPPPXPPXPXXPPXXPP 616
PP P PPPPPP P PP PP
Sbjct: 5 PPGNPP--PPPPPPGFEPPSQPPPPPP 29
Score = 32.3 bits (70), Expect = 0.100
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +3
Query: 549 PPXXXPXXPPPPPXPPXPPXXPPXPXP 629
PP P PPPPP PP PP P P
Sbjct: 5 PPGNPP--PPPPPPGFEPPSQPPPPPP 29
Score = 31.5 bits (68), Expect = 0.17
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Frame = +2
Query: 560 PP--PPPPXPPXPXXPPXXPPXXXPXXF 637
PP PPPP PP PP PP P +
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPGY 32
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 539 PXPXPXXPPPPPPXPPXPXXPPXXPP 616
P P PPPPP P PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 31.1 bits (67), Expect = 0.23
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
Frame = +3
Query: 573 PP--PPPXPPXPPXXPPXPXPXPSP 641
PP PPP PP P PP P P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 30.7 bits (66), Expect = 0.30
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 537 PLXPPPXXXPXXPPPPPXPP 596
P PPP P PPPP PP
Sbjct: 11 PPPPPPGFEPPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 6.5
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 779 PLRXPPFTPAQKXFPXXPPPPPPXP 853
P PP P P PPPPP P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 31.5 bits (68), Expect = 0.17
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 4/37 (10%)
Frame = +3
Query: 546 PPPXXXPXXPPPPPXPPXP----PXXPPXPXPXPSPF 644
P P PPPPP P P P P P P+PF
Sbjct: 347 PTPQVQGSRPPPPPPMPAPIYNVPNVPTVPTVSPNPF 383
Score = 26.2 bits (55), Expect = 6.5
Identities = 11/36 (30%), Positives = 12/36 (33%)
Frame = +1
Query: 523 INNXTPXPXPPXPXPXXPXPPXPXXPPXXPPXXXAP 630
+ P P PP P P P P P P P
Sbjct: 351 VQGSRPPPPPPMPAPIYNVPNVPTVPTVSPNPFLQP 386
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 28.3 bits (60), Expect = 1.6
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +2
Query: 551 PXXPPPPPPXPP 586
P PPPPPP PP
Sbjct: 942 PAFPPPPPPPPP 953
Score = 27.1 bits (57), Expect(2) = 0.20
Identities = 14/48 (29%), Positives = 15/48 (31%)
Frame = +2
Query: 704 PPPPXXXXPPXQXXFFAXPXXTXXXPLRXPPFTPAQKXFPXXPPPPPP 847
PPPP F+ P FP PPPPPP
Sbjct: 907 PPPPPPLPVKTSLNTFSHPDSVNIVA-NDTSVAGVMPAFPPPPPPPPP 953
Score = 25.4 bits (53), Expect(2) = 0.44
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 564 PXXPPPPPXPP 596
P PPPPP PP
Sbjct: 942 PAFPPPPPPPP 952
Score = 23.4 bits (48), Expect(2) = 1.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 560 PPPPPPXP 583
PPPPPP P
Sbjct: 907 PPPPPPLP 914
Score = 23.0 bits (47), Expect(2) = 1.6
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 566 PPPPXPPXP 592
PPPP PP P
Sbjct: 945 PPPPPPPPP 953
Score = 23.0 bits (47), Expect(2) = 0.44
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +3
Query: 579 PPPXPPXPP 605
PPP PP PP
Sbjct: 945 PPPPPPPPP 953
Score = 22.6 bits (46), Expect(2) = 0.20
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +2
Query: 563 PPPPPXPPXP 592
P PPP PP P
Sbjct: 905 PTPPPPPPLP 914
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 31.1 bits (67), Expect = 0.23
Identities = 19/38 (50%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = -2
Query: 634 GXGXGXGGXXGGXGGX---GGGGGXXGXXXGGGXRGXS 530
G G GG GG GG G GGG G GGG RG S
Sbjct: 142 GFRGGRGGSRGGFGGNSRGGFGGGSRG-GFGGGSRGGS 178
Score = 26.6 bits (56), Expect = 4.9
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -2
Query: 640 GEGXGXGXGGXXGGXGGXGGGGGXXGXXXGGGXRG 536
G G G G GG G GG G GGG RG
Sbjct: 136 GRGGRGGFRGGRGGSRGGFGGNSRGG--FGGGSRG 168
Score = 26.6 bits (56), Expect = 4.9
Identities = 16/35 (45%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = -2
Query: 634 GXGXGXGGXXGGX-GGXGGG-GGXXGXXXGGGXRG 536
G G GG G GG GGG G G GG RG
Sbjct: 146 GRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRG 180
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 6.5
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 560 PPPPPPXPP 586
PPPPPP PP
Sbjct: 306 PPPPPPPPP 314
Score = 24.6 bits (51), Expect(2) = 0.63
Identities = 8/10 (80%), Positives = 8/10 (80%)
Frame = +2
Query: 830 PPPPPPXPXS 859
PPPPPP P S
Sbjct: 306 PPPPPPPPPS 315
Score = 23.4 bits (48), Expect(2) = 0.63
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +2
Query: 806 AQKXFPXXPPPPPP 847
A P PPPPPP
Sbjct: 301 ANGGLPPPPPPPPP 314
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/48 (29%), Positives = 17/48 (35%)
Frame = +3
Query: 498 FXSCGLSFXK*LYPLXPPPXXXPXXPPPPPXPPXPPXXPPXPXPXPSP 641
+ S G + + P P P PPPP PP P P P
Sbjct: 212 YYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMP 259
Score = 27.5 bits (58), Expect = 2.8
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +2
Query: 545 PXPXXPPPPPPXPP 586
P PPPPPP PP
Sbjct: 184 PSDYNPPPPPPPPP 197
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 791 PPFTPAQKXFPXXPPPPPPXP 853
P +TP Q P PPPPP P
Sbjct: 225 PTYTPKQAD-PLPAPPPPPPP 244
>SPAP32A8.03c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 513
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 515 KFX*ITXPPXPXPXXPPPPPPXPPXP 592
+F T P PPPPPP P P
Sbjct: 225 EFQQTTSPIFSSSSTPPPPPPRPSQP 250
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 26.2 bits (55), Expect = 6.5
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = -2
Query: 94 RYPYQERAYDPCLRLFTQILRNS 26
RY Y ++ Y+ C++L +++NS
Sbjct: 297 RYVYSKKNYEGCIKLAENVIQNS 319
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 25.8 bits (54), Expect = 8.6
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +3
Query: 537 PLXPPPXXXPXXPPPPPXPPXPPXXPPXPXPXPSP 641
PL P P PP P P P P P P
Sbjct: 108 PLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLP 142
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/37 (35%), Positives = 14/37 (37%), Gaps = 2/37 (5%)
Frame = +3
Query: 537 PLXPPPXXXPXXP--PPPPXPPXPPXXPPXPXPXPSP 641
P P P P P PP P P P P P +P
Sbjct: 575 PQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAP 611
Score = 25.8 bits (54), Expect = 8.6
Identities = 13/37 (35%), Positives = 13/37 (35%), Gaps = 2/37 (5%)
Frame = +3
Query: 537 PLXPPPXXXPXXPPPP--PXPPXPPXXPPXPXPXPSP 641
P P P P P P P PP P P P P
Sbjct: 587 PSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRP 623
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.8 bits (54), Expect = 8.6
Identities = 12/29 (41%), Positives = 12/29 (41%), Gaps = 2/29 (6%)
Frame = +2
Query: 536 PPXPXPXXPPP--PPPXPPXPXXPPXXPP 616
PP P P P PP P PP PP
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPP 1910
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.140 0.456
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,013,330
Number of Sequences: 5004
Number of extensions: 63954
Number of successful extensions: 1029
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 154
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 437
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 468512460
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
- SilkBase 1999-2023 -