Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_D15
         (932 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1751 - 29215074-29216270                                         32   0.75 
07_03_0559 + 19475893-19476783                                         30   3.0  
07_03_0558 + 19461369-19462448                                         29   4.0  
07_03_0177 - 14770777-14772045                                         29   4.0  
02_01_0158 - 1103461-1104186                                           29   7.0  
01_01_0570 - 4231100-4232560                                           29   7.0  
05_03_0496 + 14706959-14707020,14707173-14707538,14708070-147082...    28   9.2  
03_05_0663 + 26546810-26547304                                         28   9.2  
01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983     28   9.2  

>07_03_1751 - 29215074-29216270
          Length = 398

 Score = 31.9 bits (69), Expect = 0.75
 Identities = 13/24 (54%), Positives = 14/24 (58%)
 Frame = -1

Query: 620 GGGGGFXXXRGXGFXPXXGGXKGG 549
           G GGGF   +G GF    GG KGG
Sbjct: 312 GAGGGFGGGKGGGFGGGFGGGKGG 335



 Score = 29.1 bits (62), Expect = 5.3
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -1

Query: 620 GGGGGFXXXRGXGFXPXXGGXKGGXG 543
           G GGGF   +G GF    GG  G  G
Sbjct: 352 GAGGGFGGGKGGGFGGGVGGGHGAGG 377



 Score = 28.3 bits (60), Expect = 9.2
 Identities = 16/39 (41%), Positives = 17/39 (43%)
 Frame = -1

Query: 620 GGGGGFXXXRGXGFXPXXGGXKGGXGKKXFFXXXKKRXF 504
           G GGGF   +G GF    GG  GG G    F   K   F
Sbjct: 288 GAGGGFGGGKGGGFG-GGGGGGGGAGAGGGFGGGKGGGF 325


>07_03_0559 + 19475893-19476783
          Length = 296

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 15/31 (48%), Positives = 16/31 (51%)
 Frame = -1

Query: 635 FXKXXGGGGGFXXXRGXGFXPXXGGXKGGXG 543
           F +  GGGGGF    G GF    GG  GG G
Sbjct: 57  FGRCHGGGGGFGG--GGGFRGGGGGGLGGGG 85


>07_03_0558 + 19461369-19462448
          Length = 359

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 13/26 (50%), Positives = 13/26 (50%)
 Frame = -1

Query: 620 GGGGGFXXXRGXGFXPXXGGXKGGXG 543
           GGGGGF    G G     GG  GG G
Sbjct: 53  GGGGGFGGGGGGGLGGGGGGLGGGHG 78


>07_03_0177 - 14770777-14772045
          Length = 422

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 13/26 (50%), Positives = 13/26 (50%)
 Frame = -1

Query: 620 GGGGGFXXXRGXGFXPXXGGXKGGXG 543
           GGGGGF    G G     GG  GG G
Sbjct: 80  GGGGGFGGGGGGGLGGGGGGGLGGGG 105


>02_01_0158 - 1103461-1104186
          Length = 241

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 15/34 (44%), Positives = 16/34 (47%)
 Frame = -1

Query: 641 GVFXKXXGGGGGFXXXRGXGFXPXXGGXKGGXGK 540
           G F K   GGGG     G GF    GG  GG G+
Sbjct: 75  GSFVKGGAGGGG---GGGGGFGSRGGGGSGGGGR 105


>01_01_0570 - 4231100-4232560
          Length = 486

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 14/34 (41%), Positives = 15/34 (44%)
 Frame = -1

Query: 641 GVFXKXXGGGGGFXXXRGXGFXPXXGGXKGGXGK 540
           G F    GGGGG     G G     GG  GG G+
Sbjct: 154 GGFGGGAGGGGGIGAGGGFGGGAGAGGGVGGGGR 187


>05_03_0496 +
           14706959-14707020,14707173-14707538,14708070-14708209,
           14708319-14708566,14708814-14708946,14709096-14709159,
           14709284-14709380,14709505-14709607,14709702-14709838,
           14710063-14710152,14710240-14710401
          Length = 533

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +1

Query: 31  FLKI*MWXXFXXXFFXFFFFFF 96
           F+ +  W  +   FF FFFFFF
Sbjct: 76  FVLVGQWEGYAFFFFFFFFFFF 97


>03_05_0663 + 26546810-26547304
          Length = 164

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 12/24 (50%), Positives = 12/24 (50%)
 Frame = -1

Query: 620 GGGGGFXXXRGXGFXPXXGGXKGG 549
           GGGGG     G G  P  GG  GG
Sbjct: 59  GGGGGIPTIPGFGSIPGMGGGMGG 82


>01_06_0719 + 31474028-31474476,31474881-31474939,31479145-31479983
          Length = 448

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 14/27 (51%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = -1

Query: 620 GGGGGFXXXRGXGFXPXXG-GXKGGXG 543
           GGGGGF   RG G     G G  GG G
Sbjct: 219 GGGGGFTGGRGGGLTGGGGEGNTGGGG 245


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,026,547
Number of Sequences: 37544
Number of extensions: 135314
Number of successful extensions: 1035
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 436
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 843
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2670960720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)