Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_D15
         (932 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical pr...    32   0.51 
AC024811-1|AAF60776.1|  494|Caenorhabditis elegans Dnaj domain (...    30   2.1  
AF125462-1|AAD12858.2|  244|Caenorhabditis elegans Hypothetical ...    29   3.6  
L25598-4|AAV58888.1|  737|Caenorhabditis elegans Calpain family ...    29   6.3  
L25598-3|AAM15551.1|  759|Caenorhabditis elegans Calpain family ...    29   6.3  
AF045646-2|AAK29827.1|  371|Caenorhabditis elegans Collagen prot...    29   6.3  

>Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical
           protein F58E10.3a protein.
          Length = 561

 Score = 32.3 bits (70), Expect = 0.51
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -1

Query: 620 GGGGGFXXXRGXGFXPXXGGXKGGXG 543
           GGGGG+   RG G+    GG  GG G
Sbjct: 31  GGGGGYSGGRGGGYGGGGGGGYGGGG 56


>AC024811-1|AAF60776.1|  494|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 28 protein.
          Length = 494

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 14/31 (45%), Positives = 14/31 (45%)
 Frame = -1

Query: 620 GGGGGFXXXRGXGFXPXXGGXKGGXGKKXFF 528
           GGGG        GF P  GG  GG G   FF
Sbjct: 461 GGGGSHGFHNFHGFNPFGGGGGGGRGGGDFF 491


>AF125462-1|AAD12858.2|  244|Caenorhabditis elegans Hypothetical
           protein Y66H1A.4 protein.
          Length = 244

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 15/31 (48%), Positives = 16/31 (51%)
 Frame = -1

Query: 635 FXKXXGGGGGFXXXRGXGFXPXXGGXKGGXG 543
           F    GGGGGF   RG G     GG +GG G
Sbjct: 3   FRGGRGGGGGFRGGRGGG---GGGGFRGGRG 30



 Score = 28.3 bits (60), Expect = 8.3
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -1

Query: 620 GGGGGFXXXRGXGFXPXXGGXKGG 549
           GGGGGF      GF    GG +GG
Sbjct: 180 GGGGGFRGGDRGGFGGGRGGFRGG 203


>L25598-4|AAV58888.1|  737|Caenorhabditis elegans Calpain family
           protein 1, isoform b protein.
          Length = 737

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 14/26 (53%), Positives = 14/26 (53%)
 Frame = -1

Query: 620 GGGGGFXXXRGXGFXPXXGGXKGGXG 543
           GGGGGF    G GF    GG  GG G
Sbjct: 61  GGGGGFGGGNG-GFGGGGGGNYGGGG 85


>L25598-3|AAM15551.1|  759|Caenorhabditis elegans Calpain family
           protein 1, isoform d protein.
          Length = 759

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 14/26 (53%), Positives = 14/26 (53%)
 Frame = -1

Query: 620 GGGGGFXXXRGXGFXPXXGGXKGGXG 543
           GGGGGF    G GF    GG  GG G
Sbjct: 61  GGGGGFGGGNG-GFGGGGGGSGGGGG 85


>AF045646-2|AAK29827.1|  371|Caenorhabditis elegans Collagen protein
           103 protein.
          Length = 371

 Score = 28.7 bits (61), Expect = 6.3
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -1

Query: 620 GGGGGFXXXRGXGFXPXXGGXKGGXG 543
           GGGGG+    G G     GG  GG G
Sbjct: 100 GGGGGYGGGHGGGHGGAVGGGYGGGG 125


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,715,989
Number of Sequences: 27780
Number of extensions: 88818
Number of successful extensions: 308
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 300
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2402214122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)