Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_D14
         (1001 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    25   1.4  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       24   2.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   5.7  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   10.0 

>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +3

Query: 480 PXPPPXXPPPQXAGP 524
           P P P  PPP  +GP
Sbjct: 339 PKPAPPPPPPSSSGP 353


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.8 bits (49), Expect = 2.5
 Identities = 10/30 (33%), Positives = 11/30 (36%)
 Frame = +3

Query: 789 PFSPXXXPPTXPPXTPPPXXAXXLPPXPXP 878
           P +P    P  P   PPP      PP   P
Sbjct: 31  PQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.6 bits (46), Expect = 5.7
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +3

Query: 486  PPPXXPPPQXAGPXXVP 536
            PPP  P P  AG   VP
Sbjct: 1166 PPPFMPSPFMAGAPNVP 1182


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.8 bits (44), Expect = 10.0
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +1

Query: 823 PPXPPPPXXPXASXPXPXPLXXSPP 897
           P   PP   P +  P P PL  + P
Sbjct: 433 PILTPPSSNPVSPVPSPDPLDLAIP 457


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,964
Number of Sequences: 438
Number of extensions: 7195
Number of successful extensions: 48
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 33258225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)