Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_D13
         (852 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   2.3  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   2.3  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.1  
AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   4.1  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   4.1  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    22   7.1  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   9.4  

>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 13/28 (46%), Positives = 13/28 (46%)
 Frame = +2

Query: 683 AFLPFGKRGXFXIXXPCXYLTSV*VVRS 766
           A LP  K        PC YLTS  VV S
Sbjct: 18  ALLPVKKHHRLEKLVPCVYLTSFSVVLS 45


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 11/27 (40%), Positives = 13/27 (48%)
 Frame = -1

Query: 498 FYGSWPFAGLLLTCSFLRYXPDSVDNR 418
           FYGSW      L+   L Y P  V N+
Sbjct: 337 FYGSWINEESKLSLDLLSYVPREVYNK 363


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 144 KKCFICEICDAIALFVTIISCNKQVN 221
           K C +C+  + I  F+ II C  Q N
Sbjct: 522 KLCDVCDSVNRIFGFIIIIGCLIQFN 547


>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 167 NFTNKAFFSLH 135
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 167 NFTNKAFFSLH 135
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +3

Query: 765 PSWAVCTNPPFSPTAGPYPVT 827
           P+W  CT     P++G  P T
Sbjct: 191 PAWVYCTRYSDRPSSGRSPRT 211


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 660 PLTRIPGPPFSP 695
           PLT  PGPP  P
Sbjct: 116 PLTPSPGPPSHP 127


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,255
Number of Sequences: 336
Number of extensions: 3768
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)