Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_D13
         (852 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0196 + 21144094-21144483                                         38   0.010
02_02_0240 + 8196140-8198248,8198381-8198650                           30   0.51 
12_01_0996 - 10084368-10084897,10084942-10085206                       29   3.6  
11_01_0463 + 3594527-3594862                                           29   3.6  
09_04_0424 + 17444261-17444665,17445974-17446367,17447367-174474...    29   3.6  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.2  
02_04_0499 - 23485707-23485822,23485899-23486112,23486464-234865...    28   8.2  

>11_06_0196 + 21144094-21144483
          Length = 129

 Score = 37.9 bits (84), Expect = 0.010
 Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
 Frame = +3

Query: 561 TLKSEVAKPDXTIKIPGVSPLEAPSCALLFXPWPLTRIPGP--PFSPSGSVALS 716
           T KS VAKP    +   V+ ++ P+ A+   PWP  R P P  P SPS S  +S
Sbjct: 69  TTKSAVAKPPAVAEPLAVAVIKPPAAAVAKPPWPQPRSPSPSMPRSPSLSPPVS 122


>02_02_0240 + 8196140-8198248,8198381-8198650
          Length = 792

 Score = 30.3 bits (65), Expect(2) = 0.51
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = +3

Query: 603 IPGVSPLEAPSCALLFXPWPLTRIPGPPFSPS 698
           +PG +PL  P   LL  P PL  +  P F PS
Sbjct: 537 VPGPAPLPRPPMPLLRPPQPLPLVNVPRFQPS 568



 Score = 20.6 bits (41), Expect(2) = 0.51
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +3

Query: 789 PPFSPTAGPYP 821
           P F P+A PYP
Sbjct: 563 PRFQPSAMPYP 573


>12_01_0996 - 10084368-10084897,10084942-10085206
          Length = 264

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 4/67 (5%)
 Frame = -3

Query: 709 ATLPEGEKGGPGIRVSGQGXNRRAXEGASRGETPGIFIVXSGFATSDLSVDFCD----AR 542
           + L  G++GG   RVS      +     + GE  G     SG A S L          AR
Sbjct: 113 SALQSGDRGGRASRVSSFRVEGQCWFATANGEVSGDLDRASGTAASALQARVSGFAGLAR 172

Query: 541 SGGRSXW 521
           SGG+  W
Sbjct: 173 SGGQGFW 179


>11_01_0463 + 3594527-3594862
          Length = 111

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 25/72 (34%), Positives = 29/72 (40%), Gaps = 8/72 (11%)
 Frame = -2

Query: 791 GVRAHSPAWSERPTPK*DTYRGXXXGKXHASRRGE-----RRTRYPGKRPGXE---QESA 636
           G  A    W ERPT + D   G   GK    RR E     R  R PG   G E    ++A
Sbjct: 41  GATASGDRWEERPTARRDRL-GLEPGKEMERRRSESLSAPRARRLPGTCNGEEGGGGKAA 99

Query: 635 XGSFQGGNAWYL 600
               + G AW L
Sbjct: 100 RTEEERGAAWLL 111


>09_04_0424 +
           17444261-17444665,17445974-17446367,17447367-17447425,
           17447507-17447637,17447737-17447833,17447936-17448100
          Length = 416

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 7/86 (8%)
 Frame = +3

Query: 609 GVSPLEAPSCALLFXPWPLTRIPGPP------FSPSGSVALSXXXXPVXISLR-CRSFAP 767
           G   ++ P   +   P P   +P PP      F+P G+ A+           +    F P
Sbjct: 10  GGDVVQKPQQVVAAPPPPQAALPPPPHWVAMPFAPPGAAAMVMQHQMAPAPPQFAPHFVP 69

Query: 768 SWAVCTNPPFSPTAGPYPVTIVLIHP 845
             AV   PP  P A P PV + +  P
Sbjct: 70  FHAVGPPPPPQPRAAPPPVAVAMGSP 95


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +3

Query: 288 NESAN---ARGEAVCVLGALPLPRSLTRCAR 371
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>02_04_0499 -
           23485707-23485822,23485899-23486112,23486464-23486511,
           23486609-23486695,23486808-23486945,23487159-23487389,
           23488524-23489504
          Length = 604

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -2

Query: 701 SRRGERRTRYPGKRPGXEQESAXGSFQG 618
           +RRGERR   P    G E+++A G   G
Sbjct: 363 ARRGERRGELPADEDGAEEQAAGGGEAG 390


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,351,545
Number of Sequences: 37544
Number of extensions: 493885
Number of successful extensions: 1461
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1461
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)