Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_D11
         (909 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF525673-1|AAM82611.1|   60|Anopheles gambiae cecropin CecB prot...    35   0.003
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    25   3.2  
AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase...    24   5.5  
AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase...    24   5.5  

>AF525673-1|AAM82611.1|   60|Anopheles gambiae cecropin CecB
           protein.
          Length = 60

 Score = 35.1 bits (77), Expect = 0.003
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = +2

Query: 194 PRWKLFKKIEKVGRNVRDGLIKAGPAIA 277
           PRWK  K++EK+GRNV     KA P IA
Sbjct: 27  PRWKFGKRLEKLGRNVFRAAKKALPVIA 54


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +1

Query: 685 PGAGXSPFRGGVXGLPNXKNXLGGXWAPPQLKXXGKK 795
           PGA   P   GV GLP  K  +G   AP  +   G+K
Sbjct: 172 PGAPGRPGVDGVKGLPGLKGDIG---APGVIGLPGQK 205


>AF063021-3|AAC16247.1|  484|Anopheles gambiae dopa decarboxylase
           isoform 2 protein.
          Length = 484

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 433 DYIMQFLDYISNYYKN 480
           D+  + +DYISNY +N
Sbjct: 18  DFAKEMVDYISNYLEN 33


>AF063021-2|AAC16249.1|  515|Anopheles gambiae dopa decarboxylase
           isoform 1 protein.
          Length = 515

 Score = 24.2 bits (50), Expect = 5.5
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +1

Query: 433 DYIMQFLDYISNYYKN 480
           D+  + +DYISNY +N
Sbjct: 49  DFAKEMVDYISNYLEN 64


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 671,014
Number of Sequences: 2352
Number of extensions: 11233
Number of successful extensions: 39
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98401338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)