Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_D10
(947 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0276 + 2028983-2029070,2030084-2030151,2030317-2031246,203... 31 1.3
06_03_1042 - 27089563-27089594,27090017-27090577,27090740-27090797 31 1.3
12_01_0816 + 7502669-7503145 30 2.3
06_03_1121 + 27767707-27768065,27768612-27769034,27770013-277701... 30 2.3
08_02_0036 - 11455762-11455802,11455996-11456104,11456207-114568... 30 3.1
09_04_0602 - 18892498-18892612,18892756-18892819,18892878-188928... 29 5.4
03_02_0910 + 12317493-12317960,12319678-12319734,12320592-123206... 29 5.4
06_01_0048 + 436156-436406,436514-436693,436725-437133 29 7.1
10_08_0286 + 16504756-16504953,16505364-16505588,16505739-165057... 28 9.4
09_01_0140 + 2083885-2083969,2084178-2084653 28 9.4
08_02_1084 - 24232968-24234779 28 9.4
06_02_0271 + 13618149-13618297,13618311-13618560 28 9.4
06_01_0500 + 3584743-3585516 28 9.4
04_04_1046 + 30405805-30405858,30405991-30407950,30408460-30408476 28 9.4
04_01_0486 - 6404315-6404333,6404803-6405260 28 9.4
>07_01_0276 +
2028983-2029070,2030084-2030151,2030317-2031246,
2031334-2031415,2031544-2031609,2032606-2033304,
2033422-2035424,2035599-2036173,2037060-2037223,
2037306-2037365,2037475-2037839
Length = 1699
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +3
Query: 504 KRPRCWPFFHRLRPPDEHHKNRRSSQRWAKPRQDYKDTRRXPP 632
+ P P ++R R D+ H + R +RW+ Y R PP
Sbjct: 103 REPNSAPRWNRWRETDKEHGDTRKLERWSDDSSKYSVDGRRPP 145
>06_03_1042 - 27089563-27089594,27090017-27090577,27090740-27090797
Length = 216
Score = 31.1 bits (67), Expect = 1.3
Identities = 25/77 (32%), Positives = 32/77 (41%)
Frame = +2
Query: 707 PFLPFREXVGXLSP*PPRPXKVSQXRV*VVPLPSWACVHXTPPFQPRXPAXLFRLTYPXL 886
P PF++ VG P P VP P + CV+ PP +P PA L P
Sbjct: 31 PLPPFKDVVG-----PSTPVAADD-----VPPPPY-CVYPPPPTKPALPAPL-----PPT 74
Query: 887 XSNPG*XPXLYPPPGXP 937
++PG P P G P
Sbjct: 75 PASPGDSPPSIAPAGNP 91
>12_01_0816 + 7502669-7503145
Length = 158
Score = 30.3 bits (65), Expect = 2.3
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +3
Query: 567 RRSSQRWAKPRQDYKDTRRXPPGKAPLRAAPPGFRXLPA*PGIPVPALSSPSGK 728
RR QRWA ++Y T + GK AA P R G+P+ +++P+G+
Sbjct: 83 RRPWQRWAVEVEEYGTTLQL--GKTAAAAAGPWRRRDAVGGGVPMAPVAAPTGE 134
>06_03_1121 +
27767707-27768065,27768612-27769034,27770013-27770175,
27770271-27770381,27770895-27770963,27771117-27771203,
27771967-27772752
Length = 665
Score = 30.3 bits (65), Expect = 2.3
Identities = 26/73 (35%), Positives = 30/73 (41%), Gaps = 4/73 (5%)
Frame = -1
Query: 845 GVETGGXGAHRPSLGAERPTPEXEIPXQXXEVMEKGRQRFPGRGGKGGDRYSRLSGQGSE 666
G+ GG G +G P P K QR PG G+ GDRY S QGS
Sbjct: 566 GLGMGGPGRPNRPVGMAPFMPPPPPPNNRGT---KREQRRPG--GERGDRYETTSDQGSR 620
Query: 665 ----TRRSGTEGS 639
T SG EG+
Sbjct: 621 GHDATGNSGAEGA 633
>08_02_0036 -
11455762-11455802,11455996-11456104,11456207-11456854,
11457422-11457491,11458563-11458624,11458729-11458803,
11459423-11459514,11460233-11461466
Length = 776
Score = 29.9 bits (64), Expect = 3.1
Identities = 23/79 (29%), Positives = 27/79 (34%), Gaps = 3/79 (3%)
Frame = -1
Query: 866 GIRXQAXGVETGGXGAHRPSLGAERPTPEXE---IPXQXXEVMEKGRQRFPGRGGKGGDR 696
G R A T G H G RP PE P GRGG+GG
Sbjct: 4 GKRRHARSNPTAGGPRHGAGAGRRRPVPELPSFVSPASVAAAFSSSSSGGRGRGGRGG-- 61
Query: 695 YSRLSGQGSETRRSGTEGS 639
R G G + S ++ S
Sbjct: 62 --RRGGGGGGSSNSASDSS 78
>09_04_0602 -
18892498-18892612,18892756-18892819,18892878-18892884,
18893980-18894153
Length = 119
Score = 29.1 bits (62), Expect = 5.4
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +1
Query: 769 GISXSGVGRSAPKLGLCAPNPPVSTPXA 852
GIS GV +A L AP P VSTP A
Sbjct: 7 GISSPGVAAAAAALLCAAPRPRVSTPPA 34
>03_02_0910 +
12317493-12317960,12319678-12319734,12320592-12320666,
12321219-12321299,12321472-12321546,12321818-12321862,
12321975-12322064,12322153-12322254,12322366-12322420,
12324966-12325027,12325521-12325555,12325877-12326115,
12326219-12328035
Length = 1066
Score = 29.1 bits (62), Expect = 5.4
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 6/50 (12%)
Frame = +3
Query: 528 FHRLRPPDEHHKNRR-SSQRWAKPRQDYKDT--RRXPPG---KAPLRAAP 659
+H RPP HH +R SQ A R ++T RR PP + LR AP
Sbjct: 821 YHSCRPPPCHHHDRPWKSQEGAMQRPPVQETTRRRAPPRHHCRPVLRGAP 870
>06_01_0048 + 436156-436406,436514-436693,436725-437133
Length = 279
Score = 28.7 bits (61), Expect = 7.1
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = -3
Query: 837 NGGVXCTQAQLGSGTTYTRX*DTL--XGRGGYGERXPTXSRKGRKGR 703
NGG C Q GSG T+ L G GG G R +R+GR+ R
Sbjct: 13 NGGGQCRQGDGGSGFTFAESGHPLARVGAGGGGGRG-AATRQGRRRR 58
>10_08_0286 +
16504756-16504953,16505364-16505588,16505739-16505794,
16505913-16506007,16506696-16506796,16507043-16507234
Length = 288
Score = 28.3 bits (60), Expect = 9.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = -1
Query: 719 RGGKGGDRYSRLSGQGSETRRSGTEG 642
RGG+GGD+ R G+G + + G+ G
Sbjct: 5 RGGEGGDKGGRGGGRGDKGGQGGSRG 30
>09_01_0140 + 2083885-2083969,2084178-2084653
Length = 186
Score = 28.3 bits (60), Expect = 9.4
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = -3
Query: 558 DARQGGGAYGKTASNAAFLRFLXFCWPFAHMFFPALSPDSVDNRITAF 415
D+ +GGGA G AA F F W FA P L+ DS ++F
Sbjct: 14 DSPRGGGAGGPAGEQAA-TSFQIFLWSFACTPPPRLALDSPSAPASSF 60
>08_02_1084 - 24232968-24234779
Length = 603
Score = 28.3 bits (60), Expect = 9.4
Identities = 18/59 (30%), Positives = 23/59 (38%)
Frame = +3
Query: 543 PPDEHHKNRRSSQRWAKPRQDYKDTRRXPPGKAPLRAAPPGFRXLPA*PGIPVPALSSP 719
PP K S Q P+Q + P PL APP + PG+ PA + P
Sbjct: 65 PPPLPQKQPPSQQLPPPPQQQQPPPQHSLPPPPPLPQAPPPQQQKVHIPGVAAPAPNHP 123
>06_02_0271 + 13618149-13618297,13618311-13618560
Length = 132
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -1
Query: 743 KGRQRFPGRGGKGGDRYSRLSGQGSETRRSGTEGSFXRGXTPG 615
+GR R G GG+GG + +E R G EG G G
Sbjct: 24 RGRWRGRGGGGEGGGEVEAAVERAAERGRGGGEGGGGEGGGEG 66
>06_01_0500 + 3584743-3585516
Length = 257
Score = 28.3 bits (60), Expect = 9.4
Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +3
Query: 486 KRXGTVKRPRCWPFFHRLR--PPDEHHKNRRSSQRWAKPRQDYKDTRRXPPGKAPLRAA 656
K+ G+ K P P R+R PPD H + R + +R P ++ P +P AA
Sbjct: 5 KKPGSKKMPT--PAVMRIRSPPPDPHRRARAAPRRCIPPLASDSESSASSPTTSPAAAA 61
>04_04_1046 + 30405805-30405858,30405991-30407950,30408460-30408476
Length = 676
Score = 28.3 bits (60), Expect = 9.4
Identities = 17/59 (28%), Positives = 22/59 (37%)
Frame = +3
Query: 543 PPDEHHKNRRSSQRWAKPRQDYKDTRRXPPGKAPLRAAPPGFRXLPA*PGIPVPALSSP 719
PP+ S+ W PR + PP R PP + LP PG P+ P
Sbjct: 463 PPEPTSSTSGSTSSWVPPRDNASSWAPPPP-----RGNPPSWVPLPPPPGGNAPSWVPP 516
>04_01_0486 - 6404315-6404333,6404803-6405260
Length = 158
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 756 GGYGERXPTXSRKGRKGRGQVFPVKRAGXGNQEERHGGEL 637
GG G R +GR+GR + + G G Q R GGE+
Sbjct: 48 GGGGRRGGASGGRGRRGRQRA---AQGGGGRQRARGGGEV 84
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,475,191
Number of Sequences: 37544
Number of extensions: 542672
Number of successful extensions: 1920
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1749
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1907
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2729534420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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