Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_D06
         (929 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81095-2|CAB03157.1|   65|Caenorhabditis elegans Hypothetical pr...    55   8e-08
AF047660-4|AAM54169.1|   63|Caenorhabditis elegans Hypothetical ...    52   8e-07
AC006794-5|AAK68502.1|  821|Caenorhabditis elegans Hypothetical ...    36   0.055
Z83125-5|CAB05622.2|  362|Caenorhabditis elegans Hypothetical pr...    32   0.67 
AC006675-8|AAK84554.1|  414|Caenorhabditis elegans Hypothetical ...    31   1.2  

>Z81095-2|CAB03157.1|   65|Caenorhabditis elegans Hypothetical
           protein F59F4.2 protein.
          Length = 65

 Score = 54.8 bits (126), Expect = 8e-08
 Identities = 23/38 (60%), Positives = 28/38 (73%)
 Frame = +1

Query: 148 PKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPW 261
           PKQRM +AN+  SKN+  RGNV K+ K  ED+YP APW
Sbjct: 3   PKQRMTLANKQFSKNVNNRGNVAKSLKPAEDKYPAAPW 40



 Score = 39.1 bits (87), Expect = 0.004
 Identities = 15/25 (60%), Positives = 22/25 (88%)
 Frame = +2

Query: 257 PGLLALFIFVVCGSAVFQIIQSIRL 331
           P L+ LF+FVVCGSAVF+II+ +++
Sbjct: 39  PWLIGLFVFVVCGSAVFEIIRYVKM 63


>AF047660-4|AAM54169.1|   63|Caenorhabditis elegans Hypothetical
           protein T09A12.5 protein.
          Length = 63

 Score = 51.6 bits (118), Expect = 8e-07
 Identities = 21/38 (55%), Positives = 26/38 (68%)
 Frame = +1

Query: 148 PKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPW 261
           PKQRM +AN   SKN+T RGNVPK  K  E ++P + W
Sbjct: 3   PKQRMAVANAQFSKNVTQRGNVPKGNKTNESKFPTSQW 40



 Score = 38.7 bits (86), Expect = 0.006
 Identities = 19/40 (47%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
 Frame = +2

Query: 221 LPRKKKTNILWHPG---LLALFIFVVCGSAVFQIIQSIRL 331
           +P+  KTN    P    L+ LFIFVVCGSA+F++I+ I++
Sbjct: 24  VPKGNKTNESKFPTSQWLIGLFIFVVCGSAIFEVIRYIKV 63


>AC006794-5|AAK68502.1|  821|Caenorhabditis elegans Hypothetical
           protein Y50D4A.1 protein.
          Length = 821

 Score = 35.5 bits (78), Expect = 0.055
 Identities = 20/59 (33%), Positives = 33/59 (55%)
 Frame = +1

Query: 13  TTHYRESLRFDFYLRVKRNCALWLFESF*FIIKLTNILYNKTKWPPKQRMRIANEIASK 189
           TT + E LR +F L++K +C LW ++      K+  +   KT++    +  IAN +ASK
Sbjct: 377 TTGFFEHLRREFPLQIKLHCLLWSYKRLDVWEKIC-VEEGKTRYETVLKSEIANPLASK 434


>Z83125-5|CAB05622.2|  362|Caenorhabditis elegans Hypothetical
           protein T15D6.6 protein.
          Length = 362

 Score = 31.9 bits (69), Expect = 0.67
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
 Frame = -3

Query: 207 PPHCDVFTGDLV-GDTHSLLRGPFCFVIKYICQFNNKLKGLEEPQRAISLDT*IKV 43
           P + ++  G LV G   +  R      I+Y+C+ NN+ KG+ +  RA   D  +K+
Sbjct: 17  PSNVELHFGGLVCGACAAFFRRTVSLNIRYLCEKNNQCKGMRKNCRACRFDYCVKI 72


>AC006675-8|AAK84554.1|  414|Caenorhabditis elegans Hypothetical
           protein M02H5.4 protein.
          Length = 414

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
 Frame = -3

Query: 360 FSQWSS*FKASLID--WIIWNTAEPHTTKMKRARSPGCHRILV 238
           F Q+SS F+  +I   WI+WN  E   T  K  +   C  IL+
Sbjct: 219 FQQFSSEFQIEIIKKVWIVWNGLEKLATTAKMRKRMNCDDILM 261


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,541,753
Number of Sequences: 27780
Number of extensions: 334855
Number of successful extensions: 739
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 718
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2391724104
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)