Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_D06
(929 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 24 1.7
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.9
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.9
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.9
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.9
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.9
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 23 3.9
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.9
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 23 3.9
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 22 9.1
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 24.2 bits (50), Expect = 1.7
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -1
Query: 239 SSFSLVVLGTFPLIVMFLLAISLAIRILCLGGH 141
+S ++ +LGT+ +MF++A S+ IL L H
Sbjct: 287 TSDAVPLLGTYFNCIMFMVASSVVSTILILNYH 319
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.9
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -1
Query: 233 FSLVVLGTFPLIVMFLLAISLAIRILCLGGHFVL 132
F+ +V+ LIV L + I ILC H ++
Sbjct: 427 FAAMVVDRLCLIVFTLFTVLATIVILCRAPHIIV 460
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.9
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -1
Query: 233 FSLVVLGTFPLIVMFLLAISLAIRILCLGGHFVL 132
F+ +V+ LIV L + I ILC H ++
Sbjct: 427 FAAMVVDRLCLIVFTLFTVLATIVILCRAPHIIV 460
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.9
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -1
Query: 233 FSLVVLGTFPLIVMFLLAISLAIRILCLGGHFVL 132
F+ +V+ LIV L + I ILC H ++
Sbjct: 427 FAAMVVDRLCLIVFTLFTVLATIVILCRAPHIIV 460
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.9
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -1
Query: 233 FSLVVLGTFPLIVMFLLAISLAIRILCLGGHFVL 132
F+ +V+ LIV L + I ILC H ++
Sbjct: 427 FAAMVVDRLCLIVFTLFTVLATIVILCRAPHIIV 460
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.9
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -1
Query: 233 FSLVVLGTFPLIVMFLLAISLAIRILCLGGHFVL 132
F+ +V+ LIV L + I ILC H ++
Sbjct: 427 FAAMVVDRLCLIVFTLFTVLATIVILCRAPHIIV 460
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 23.0 bits (47), Expect = 3.9
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -1
Query: 233 FSLVVLGTFPLIVMFLLAISLAIRILCLGGHFVL 132
F+ +V+ LIV L + I ILC H ++
Sbjct: 427 FAAMVVDRLCLIVFTLFTVLATIVILCRAPHIIV 460
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 3.9
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -1
Query: 233 FSLVVLGTFPLIVMFLLAISLAIRILCLGGHFVL 132
F+ +V+ LIV L + I ILC H ++
Sbjct: 495 FAAMVVDRLCLIVFTLFTVLATIVILCRAPHIIV 528
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 23.0 bits (47), Expect = 3.9
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -1
Query: 233 FSLVVLGTFPLIVMFLLAISLAIRILCLGGHFVL 132
F+ +V+ LIV L + I ILC H ++
Sbjct: 495 FAAMVVDRLCLIVFTLFTVLATIVILCRAPHIIV 528
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 21.8 bits (44), Expect = 9.1
Identities = 9/32 (28%), Positives = 15/32 (46%)
Frame = -2
Query: 310 LEHSRATHYEDEESKEPRVPQDIGLLFPW*FW 215
++ R H+ + S + IG +F W FW
Sbjct: 193 MKEKRKEHHLEGPSYNSDIFAMIGTIFLWLFW 224
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,163
Number of Sequences: 438
Number of extensions: 5582
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30355689
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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